Pcon011341.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ptychoptera contaminata
Gene Symbol
ZNF236
Assembly
GCA_963942525.1
Location
OZ012638.1:33049657-33057222[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 0.67 44 4.7 0.2 2 23 230 252 229 252 0.87
2 32 0.00052 0.034 14.5 1.3 1 23 285 307 285 307 0.98
3 32 7.9e-05 0.0052 17.1 2.2 1 23 315 337 315 337 0.99
4 32 4.2e-05 0.0028 18.0 0.3 1 23 346 369 346 369 0.98
5 32 0.91 60 4.3 1.6 1 23 375 398 375 398 0.93
6 32 0.00055 0.036 14.4 1.0 1 23 436 459 436 459 0.96
7 32 1.5e-05 0.00098 19.4 3.2 1 23 465 487 465 487 0.98
8 32 0.92 61 4.3 0.8 1 13 493 505 493 508 0.88
9 32 0.00035 0.023 15.1 0.6 1 23 681 703 681 703 0.98
10 32 0.32 21 5.7 7.0 1 21 711 731 711 733 0.85
11 32 7.5e-05 0.005 17.2 0.4 1 23 742 765 742 765 0.97
12 32 0.029 1.9 9.0 2.3 1 23 773 796 773 796 0.95
13 32 3.8 2.5e+02 2.4 2.6 2 23 805 826 804 826 0.95
14 32 0.00011 0.0074 16.6 0.9 1 23 833 856 833 856 0.96
15 32 5e-06 0.00033 20.9 0.9 1 23 862 884 862 884 0.98
16 32 3.6 2.4e+02 2.4 0.7 6 23 1009 1026 1009 1026 0.98
17 32 0.051 3.4 8.3 3.3 1 23 1032 1054 1032 1054 0.97
18 32 0.00077 0.051 14.0 5.1 1 23 1062 1084 1062 1084 0.96
19 32 0.00061 0.04 14.3 0.4 1 23 1093 1116 1093 1116 0.98
20 32 0.006 0.4 11.2 0.5 1 23 1124 1147 1124 1147 0.95
21 32 0.024 1.6 9.3 0.2 2 23 1156 1177 1155 1177 0.96
22 32 0.00078 0.051 14.0 1.7 1 23 1184 1207 1184 1207 0.95
23 32 3.1e-05 0.0021 18.4 2.1 1 23 1213 1235 1213 1235 0.97
24 32 0.48 31 5.2 0.4 6 23 1431 1448 1431 1448 0.98
25 32 9.9e-05 0.0065 16.8 1.1 1 23 1454 1476 1454 1476 0.98
26 32 0.0018 0.12 12.8 2.4 1 23 1484 1506 1484 1506 0.95
27 32 1.9e-05 0.0013 19.0 0.7 1 23 1515 1538 1515 1538 0.98
28 32 0.11 7.4 7.2 2.3 1 23 1544 1567 1544 1567 0.92
29 32 0.11 7.4 7.2 0.2 2 23 1576 1597 1575 1597 0.96
30 32 0.0011 0.072 13.5 0.6 1 23 1604 1627 1604 1627 0.96
31 32 6.1e-05 0.004 17.4 1.6 1 23 1633 1655 1633 1655 0.96
32 32 0.074 4.9 7.8 1.8 1 23 1661 1684 1661 1684 0.97

Sequence Information

Coding Sequence
ATGTCTTTagcaaaatgttatttatgtttggATAATTCTTATGAATATTTGGAAATATTTAGTGATGTTGgattagagaaaaatatttgcaatgtaataaaacaacatttcTGGTTTGTTGCTGAGgtaaatgaaaataatttattatcaaagaaGATATGCAATTCTTGTtggattaaaacagaaaattttcataatttctatttaaaagtaaaatcaaaGCAAGATTTGTATCTGCAACAACAGAGTGCTGTTGTTTACATTaaggaagaagaaaaattagaagaacaaaataaatatttaacttttgaTATTGAAAAGGAGGAAACtaataaaactacaaaaataaaatgcgaaGTAGAACTTAGCACAGATAATGTAGAATATAGTGTACCCGATTATGATGCTCCTGATTACGATACTCGAGACTACGATCTAAATGATAGCATTAATGATCATAGTGGTGATTGTGAAGATGACGCTGATAATGATGTACCATTTTCAGAAAATATAGCAGATGCTAGTGATCCGATTAATAGTTCATATGAAGATGTTGCACTACCGCCAAAAGAAacgaaagaagaaaacaaaaaaaaatgtagtaaGGTgtccaaagaaaataaaaagaaagagaaACTTCCCGAGATTGTTAATTTAGATGAACAAATAAcgcattattttaaaatgtcttGTGATCTTTGTCCAACTGAATTTAAAACATTCATGGATGCAAAAACTCATTATGCGGATGCCCATCAAATATCAAAAGGATATTTAAGTTgttgtaaacaaaaattaaaaaatctaacCGCAATAAAGGAGCATATCTACTGGCATACAAATCCAGAAAAGTTTacATGCaaaatttgtaatataatatttgctGTTGATCGCGGCTTAAAGCGTCATATGTGTAGTCATGAGCCAGAAGAAAATCGTCCATATAAATGTGATTCCTGTAGTaaatcgtttgcaaaattatatttattaaaaattcatacaaAAACACATACGAATGCATTAatggataaaaaatttaaatgtgatACATGTGGCAAAGgATACCCAGTTGAATCTCAATTACGATCTCATAAACGTGTTGTGCatgaacataattataatcactTTTGTGATATTTGTGCTCGTTTCTTCCAAGGTAAAAAGGTATTAGATCGGCATATAAATGAGTTTCATTTAggtattaaaatgcaaaaaatacaaTGTAAAATATGCGATGCGTGGATACAAACAAATTCTATGCGTGGACATATGGAACGACACAAAGACGACGATGAATCAAAAGAATATGCTTGTAAAATTTGTGGTAAGAAAATCGTTAGCAAGCACGGATTAAAATCACATGAGAGATATGTACATACAATGGAACCACGGTACAAGTGCAATGtttgcaataaaatgtttaaaataaaaaatcacttaaaGGATCATATGGCATCGCATACTGGTGAAAGTCGTTACACTTGCCTATTTTGTCCGAAAACATTTCATTCAAATGaAGAGAGAATAGAACAGGATCACTGCGAAAACAACGAAAATGATAATTTGAAACGTTTTAAAGACAacgttgatttaataaaagaagataATAAAGATGGATTATACTctgataatgttaaaaattatgatagtGATTCCTATTTAGACAATACAAAAGATTTAACAACTAAGGaagtaaacaatttaaattcaaaagaaaatgtcGAGAGTACGGATGTAGAAGATAAATTACGTGAttgtagtaataaaaatgatacagATAATTCATCAGATGAAAACGAAGAAGACACAATAGAAGAAGGACAAAGAttcaaagaagaagaagaagaacaaATTTGCCAATTTTTTACTATGACATGTGATTTGTGTGCATCTCACAAATTCACATCATTTAATGATGCAGATAGTCATTATTCAGAGGTTCATCAAATACCACaaggttatttaatttgttgtaaaagaaaatttaaatgtatgaCAAGAATCAGAGAACATATTTTCTGGCATACAAATCCTGAAAAATTTACatgCAAGCTGTGTAAGAAGATTTATGCTGATAGACGTGGTTTGGACCGTCATATTTTGAGTCACGAACCAGAAGAAAATCGTCCGTACAAATGTGATTCCTGTAGTAAATCGTTtgtcaaattatatttaatgaatcaCCATAAAAGGTGTCACACATACTCTTTAatggataaaaaatttaaatgtgatAAATGCGGAAATGGTTTTCCTACTCAAAGATTTCTGAACAATCATATAAGAGCTGTCCATGAGGGTGTCTATGCAAAAACATATGTTTGCGATATTTGTGCcaaagtatttaaatgtaaagtaaaatttaatcgtCATCGCAACGAAATTCATTTAGGCATTAAACCACAAAAGGTACAATGTAAATTATGTTTCACTTGGCTAAAGAACAAACATGATATTCGTCGACATATGGTTCGACATGAGGATGAGTCAAAGGAgtttatttgcaaattttgTGGTAAAAAAACGGCAAATAGGGATGCATTACGGAAGCATGAAAGATATGTACATATTATGGAaccaaaatttaaatgtacCTACTGTGAGAAAGCATTTAAAAGAGCAGTTGGACTCAAAGAGCATTTAACAACGCACACTGGTGAAATCCTATACACATCTTTGTCTGTTCAACCAGAGATTACAGACGTTTCAAATGACACGGATATCGATTATGAATTAGAAAATGAAGAAGACATTCCACTTGCTAAAATTATTGCGATAAATAGACGTAAATGTGTCCATAAAACGGATATTGgtagagtaaaaaataaaaagaaaattgataaagagaataacattaaaacaaataaaagaataagagATAGTGAAATTCAGGATAATGAACaaatttgtcaattttttaCAATGGAATGTAATTTATGTGCTTCAGAAAAGTTTTCAACATTTCGTGAAGTTAAATCTCATTATTTAAGACAACATAAAATCAAAAGAGGTTATATTATTTgctgtaaaagaaaatttaaatttcttacatCGATCAGAGAGCATATAATGTGGCATAAAAATCCAGAAGATTTTAcatgtaaattgtgtaataagctttatgtaaataaatgtgcTCTTGATAATCATAAACTAAGTCATGAGCCAGAAATGAATCGTCTCCATAAATGTGACGTCTGTGAAAAAACTTTCACACGGTATTATCAAATGAAACAGCACAAACTTAATCACACGTTGTCGTCAATGGAAAAAACATTCAAATGTGAAACGTGTGGAAGCGGcttCCCAAAGGAATACTTGTTAAGAAATCATAAACGGGTCGTACACGAGGGCGTATACTCTCAGACTTTTATCTGTGATATTTGCGCAAAcgtatttaaaagtaaaataacatttaatcgGCATCGAAATGAGGAACACTTAGGCATCAAGTCACCAAAAATACAATGTCAATTGTGCGGTGCAtggataaaaaatgaatattacttaaaaagaCATATGAAAATACATCAGGAGGAGactaaagatttttattgtaaatattgtaataaaaagtcAGCAAGTAGAGAAGCATTAAGGAAACATGAAAACTATGTACATGTTTTGAAAGCAACATTTAATTGTacattttgtgataaaattttcaaaagatCAATTCAGTTAAAGGAACATTTAACAACGCATACAGGTGAAATTCTATACACCTACAATTTTGTATGTGAACAGCAACCGATTAGAATTGTTACTGTAGATTCAGCAGATCAACTAGAGTCACAGAATATCGAAGATTTCTCAGAAGTTATAAAACTAGAACAACAAGAAATATCCATAGAAAATAATGTAGTAATTACCGATAATTTGCAAGTATCCGAAGATGAATTACCTTTAgtgaaaatagttaaaaagcaaaaaaaaaacaagaaacagcCTACCCGACAAAGTAAAAGAAGGAAAACTATTCAAGAAAAATGTACGGAACAAAGTGAAGAAATTCctgaaataaatgtaaataactaCGCCGATTATAATGAAACTTGTATTTCTGAGGAGGACAATAATGATCTTATTTTTGAGGAAAAGActgaagaaaatgaaaacgaCAATGATGAGGAATATATTGCCAAATCAAAGGCATATGATGACGAACAAATTCGTCAATTTTTTAACATGTCCTGTGATTTATGCGAATCAGAACAATTTCAAACATTTCGTGATGTGAAAGCTCATTATCTGTCTCAACACGAAATCGCAAAGGGATATGTTATTTGTTGTAAAAGAAAGTTTAAAACTTTAGCAACAATTAAGGAGCACATGCTATGGCATGCAAATCCGGATTCATTTACttgtaaattatgtaaaaaagtttttgttaataaaattggtCTCAGCTATCATATGTTAAATCATGAACCAGAATCAAATCGGCCACACAAGTGTGATATATGTGATAAAGCATTTGCGAAATTCTATCAAATGAATCAGCATAAAGTTAGCCATTCATATTCAGGaatggataaaaaatataaatgtgaaaCGTGTGGCAATGggtaTCCAACGCCATCCCATTTACGAACGCATACCCGTGTTGTTCATGATGCTATTTATGCTCACGTATGTGATATCTGtgcaaaagtatttaaaagcaaattaGTATTCGATCGTCATCACAATGAAATGCATTTAGGTATTAAACCGCTAAAAATTCAATGTCAATTGTGCGGTGCATGGCTTAAGAACGAAACTTATTTGCGAAGACACATGGTGCGACATGAAGAGGCCTCTAAAGaatttatatgcaaattttGTGGTAAGAAATCACCAAGCAGAGAAGCATTACGCAGTCACGAACGTTATGTGCATATTAGTGAgcgtaaatttaaatgttcgTATTGTGAAAAAGCGTTTAGAAAACCAAAGGAATTACGAGAACATAGTACAATGCATACCGGTGAAGagttatataaatgtttgttttgcaTAAGAACATTTAATTCAAATGCAAATATGTATTCACATCAATCGAAAGTTCATCGTCTCGAATGGATTGAGTACAAGacaaggaaaaatatttaa
Protein Sequence
MSLAKCYLCLDNSYEYLEIFSDVGLEKNICNVIKQHFWFVAEVNENNLLSKKICNSCWIKTENFHNFYLKVKSKQDLYLQQQSAVVYIKEEEKLEEQNKYLTFDIEKEETNKTTKIKCEVELSTDNVEYSVPDYDAPDYDTRDYDLNDSINDHSGDCEDDADNDVPFSENIADASDPINSSYEDVALPPKETKEENKKKCSKVSKENKKKEKLPEIVNLDEQITHYFKMSCDLCPTEFKTFMDAKTHYADAHQISKGYLSCCKQKLKNLTAIKEHIYWHTNPEKFTCKICNIIFAVDRGLKRHMCSHEPEENRPYKCDSCSKSFAKLYLLKIHTKTHTNALMDKKFKCDTCGKGYPVESQLRSHKRVVHEHNYNHFCDICARFFQGKKVLDRHINEFHLGIKMQKIQCKICDAWIQTNSMRGHMERHKDDDESKEYACKICGKKIVSKHGLKSHERYVHTMEPRYKCNVCNKMFKIKNHLKDHMASHTGESRYTCLFCPKTFHSNEERIEQDHCENNENDNLKRFKDNVDLIKEDNKDGLYSDNVKNYDSDSYLDNTKDLTTKEVNNLNSKENVESTDVEDKLRDCSNKNDTDNSSDENEEDTIEEGQRFKEEEEEQICQFFTMTCDLCASHKFTSFNDADSHYSEVHQIPQGYLICCKRKFKCMTRIREHIFWHTNPEKFTCKLCKKIYADRRGLDRHILSHEPEENRPYKCDSCSKSFVKLYLMNHHKRCHTYSLMDKKFKCDKCGNGFPTQRFLNNHIRAVHEGVYAKTYVCDICAKVFKCKVKFNRHRNEIHLGIKPQKVQCKLCFTWLKNKHDIRRHMVRHEDESKEFICKFCGKKTANRDALRKHERYVHIMEPKFKCTYCEKAFKRAVGLKEHLTTHTGEILYTSLSVQPEITDVSNDTDIDYELENEEDIPLAKIIAINRRKCVHKTDIGRVKNKKKIDKENNIKTNKRIRDSEIQDNEQICQFFTMECNLCASEKFSTFREVKSHYLRQHKIKRGYIICCKRKFKFLTSIREHIMWHKNPEDFTCKLCNKLYVNKCALDNHKLSHEPEMNRLHKCDVCEKTFTRYYQMKQHKLNHTLSSMEKTFKCETCGSGFPKEYLLRNHKRVVHEGVYSQTFICDICANVFKSKITFNRHRNEEHLGIKSPKIQCQLCGAWIKNEYYLKRHMKIHQEETKDFYCKYCNKKSASREALRKHENYVHVLKATFNCTFCDKIFKRSIQLKEHLTTHTGEILYTYNFVCEQQPIRIVTVDSADQLESQNIEDFSEVIKLEQQEISIENNVVITDNLQVSEDELPLVKIVKKQKKNKKQPTRQSKRRKTIQEKCTEQSEEIPEINVNNYADYNETCISEEDNNDLIFEEKTEENENDNDEEYIAKSKAYDDEQIRQFFNMSCDLCESEQFQTFRDVKAHYLSQHEIAKGYVICCKRKFKTLATIKEHMLWHANPDSFTCKLCKKVFVNKIGLSYHMLNHEPESNRPHKCDICDKAFAKFYQMNQHKVSHSYSGMDKKYKCETCGNGYPTPSHLRTHTRVVHDAIYAHVCDICAKVFKSKLVFDRHHNEMHLGIKPLKIQCQLCGAWLKNETYLRRHMVRHEEASKEFICKFCGKKSPSREALRSHERYVHISERKFKCSYCEKAFRKPKELREHSTMHTGEELYKCLFCIRTFNSNANMYSHQSKVHRLEWIEYKTRKNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-