Basic Information

Insect: Ptychoptera contaminata
Gene Symbol: -
Assembly: GCA_963942525.1
Location: OZ012636.1:23149141-23155384[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.6e-05 0.0017 18.6 3.3 1 23 371 393 371 393 0.98

2 18 2.5e-05 0.0016 18.7 0.6 1 23 399 421 399 421 0.98

3 18 5.6e-05 0.0037 17.6 1.7 1 23 427 449 427 449 0.98

4 18 4.3e-06 0.00028 21.1 2.7 1 23 455 477 455 477 0.97

5 18 3.7e-05 0.0025 18.1 4.7 1 23 483 505 483 505 0.99

6 18 3.3e-05 0.0022 18.3 5.1 1 23 511 533 511 533 0.97

7 18 2.6e-06 0.00017 21.8 5.9 1 23 539 561 539 561 0.98

8 18 1.3e-07 8.8e-06 25.8 2.5 1 23 567 589 567 589 0.97

9 18 7e-05 0.0046 17.3 6.7 1 23 595 617 595 617 0.97

10 18 3e-06 0.0002 21.5 5.2 1 23 623 645 623 645 0.97

11 18 2.5e-06 0.00017 21.8 5.0 1 23 651 673 651 673 0.98

12 18 0.00012 0.0081 16.5 10.1 1 23 679 701 679 701 0.98

13 18 5.2e-06 0.00034 20.8 8.9 1 23 707 729 707 729 0.98

14 18 1.6e-05 0.0011 19.3 7.7 1 23 735 757 735 757 0.98

15 18 8.3e-05 0.0055 17.0 6.8 1 23 763 786 763 786 0.95

16 18 2.1e-05 0.0014 18.9 0.6 1 23 792 814 792 814 0.98

17 18 0.0027 0.18 12.3 4.2 1 23 824 846 824 846 0.98

18 18 1.5e-06 9.6e-05 22.6 1.0 1 23 852 874 852 874 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.6e-05	0.0017	18.6	3.3	1	23	371	393	371	393	0.98
2	18	2.5e-05	0.0016	18.7	0.6	1	23	399	421	399	421	0.98
3	18	5.6e-05	0.0037	17.6	1.7	1	23	427	449	427	449	0.98
4	18	4.3e-06	0.00028	21.1	2.7	1	23	455	477	455	477	0.97
5	18	3.7e-05	0.0025	18.1	4.7	1	23	483	505	483	505	0.99
6	18	3.3e-05	0.0022	18.3	5.1	1	23	511	533	511	533	0.97
7	18	2.6e-06	0.00017	21.8	5.9	1	23	539	561	539	561	0.98
8	18	1.3e-07	8.8e-06	25.8	2.5	1	23	567	589	567	589	0.97
9	18	7e-05	0.0046	17.3	6.7	1	23	595	617	595	617	0.97
10	18	3e-06	0.0002	21.5	5.2	1	23	623	645	623	645	0.97
11	18	2.5e-06	0.00017	21.8	5.0	1	23	651	673	651	673	0.98
12	18	0.00012	0.0081	16.5	10.1	1	23	679	701	679	701	0.98
13	18	5.2e-06	0.00034	20.8	8.9	1	23	707	729	707	729	0.98
14	18	1.6e-05	0.0011	19.3	7.7	1	23	735	757	735	757	0.98
15	18	8.3e-05	0.0055	17.0	6.8	1	23	763	786	763	786	0.95
16	18	2.1e-05	0.0014	18.9	0.6	1	23	792	814	792	814	0.98
17	18	0.0027	0.18	12.3	4.2	1	23	824	846	824	846	0.98
18	18	1.5e-06	9.6e-05	22.6	1.0	1	23	852	874	852	874	0.97

Sequence Information

Coding Sequence: atgaatccAGAACATAATATACAATCGCAAGGAAATAATCAGCCGGTTGTTGAGgATGTAGCATCCCTTCTTTCTTCAGATTCATCACTGTTGCTAAGTGGACCAAATTCAAATATATCGGGAAATCAATCATCATCTATTCATATACCGACTTCACTTATAGattcacataatataaataattcaaccaGTTTATCATTGAGTAGTTCTCATCACAGTGGTCCACTTACATCAATATCtaatcaccatcatcatctaCAAAATCACCAACATCAGCAGCAACATAATCAACATCAAGATTTAATACATATACATAACTCTGGAGGCTCTATTGGACTAGTCAATCTAGATAatacaacaaatattaatattaacagctctaataaagatttaaaagtATTAGACAGCCATTCTCATCTGCAACATCACCAACTTAACCTTCATCATAATACACATCCTTCCTTAAATCATATAAGTCATCAGTTAAGTGCTAACCATCACCACCAACTACAGTCGCCACAACATCAAGTGTTGCAAACACATTCTGATTTAGGGGGACACATTGATTCTTTACCAGtaataaaagatgaaaaattagaTGATAATTGTAGATTATTAATTCCACAACCCCATCAAAATCAATTACAATTATCAACTCATATATTGGGTCCACAAACAGAAATAAAGACACAAACAACACCATATATGGTTGATGTCCGTAGTGCCGACggaacttttataaaattacttgaTCAACCAGAATTAGGTAAAGCGCTAGGTGGTGAAATGTATAAGgtcaaTATAGAAGACTTAagtcaatttttaaattatcatgAGGTATTCGGTAAATTACCAGGTGATTTGCTTACTGGAGCACCTGCATTACAAGCCGCATGTACAACAACATCAGTGGGATCAATTGTGACACCTAATCCTGTTGTGGTTAGCAGCATAGTGACAAACTCTACAAGTAACAGTATTGTCACTAATAATAGTTTAGTTTCAAGTAGTGCTGCTTTACCAAACGCACTTGGGATTGGAATACCGAAAATCGAAACAGATACATTAGCCATAGTTGATCCGGCTGGCAACAGTATTACAATTGCATCACATACATGCGATATTTGTGGTAAAAAGTTCCAATTTCAATATCAACTGATTGTTCATAGacGTTATCACAATGAACGTAAACCATTTACTTGTCAAGTATGTGGACAAGCATTCACTACTACGACAGATTTAACAAGTCATGGCAAATCTCATATTGGAGGCACCATGTTTACATGCACTGTATGCTTTCACGTATTCGCGAATGATGCAAGCCTGGAAAGACATATGAAACGTCATTCAACCGATAAACCATTTGCTTGTACAACATGTCAAAAAACATTTGCGCGTAAAGAACATCTGGATAATCATATAAGAAGTCATACTGGTGAGACTCCATTTCGATGTCAATATTGTGCTAAGACATTTACTAGAAAGGAACATATGGTGAATCATGTGCGAAAGCATACCGGTGAAACCCCACACCGTTGtgatatttgcaaaaaatcatttacacGAAAAGAACATTATATGAATCATGTAATGTGGCATACagGTGAAACACCACATCAGTGCACAGTGTGTAATAAAAAGTATACTAGAAAGGAACATTTAGCAAATCATATGCGATCGCATACAAATGATACACCATTTCGTTGTGAAATTTGCGGTAAATCATTTACACGTAAAGAACATTTTACCAATCATATACTTTGGCATACCGGCGAGACACCCCATCGCTGTGATTTTTGTTCAAAAACATTTACACGTAAAGAGCATTTGCTAAATCATGTACGCCAGCATACCGGTGAATCACCTCATCGTTGTGGTTATTGTGATAAAACATTTACACGGAAGGAGCATCTCGTTAATCATGTAAGGCAGCATACTGGCGAAACGCCATTTAAATGTAGTCATTGTCCAAAAGCTTTTACGAGGAAAGACCATTTAGtaaatcaTGAACGACAGCATACAGGTGAATCTCCTCATAAGTGTACATTttgtgaaaaatgttttactcGAAAGGAACATTTAACAAATCATGTTCGTCAACATACTGGCGAATCCCCGCATCGATGTCATTATTGTTCGAAGTCGTTTACGCGTAAAGAACATTTGACAAATCATGTTCGaattcaTACTGGTGATTCTCCACATCGTTGTGAATTTTGTCAGAAAACTTTTACGCGTAAAGAACATCTTACAAATCATCTTCGACAGCATTCTAGTGAGAATCCACATTGCTGCAATGTGTGTTCAAAGCCATTTACTAGAAAAGAGCACCTGATAAATCATATGAGCCGCTCTCATACCGGTGAACGTCCATTCCAATGTGACGAATGTGGAAAGTCATTTCCACTTAAAGGAAATCTTTTATTCCATCAACGAAGTCATAATAAAGGTCAGGATGCTGAAAGGCCTTTTAGCTGCGACTTATGTCCAAAAACGTTTATATGCAAaggTCATTTGGTGTCACATCGACGCTCACATTTAGGTGAACGTCCATTTGCATGTACACAATGTGGAAAAACTTTTGTTGAAAAGGGAAATATGTTGAGACATATGAAAAAACATCAACTAGATACAGCATCCCAACAAATTCCACCTTTGGAACCACAAATTATAATTGCACAACAATCAACAAATCAGCCATTACATTTACAAAGTTCTTCCGATACTACGACTTCTGCAGTATCGACTGTATCATTAGCACCTTCTGCCACAATTACGTCGGCATCAGAGCAGCATCAACAACAATTACAGCAACAACACCagcatcagcaacaacaatcaACATCTATGGAtactttatcaataataacgCATGCATCAGAAGCATCGTCAGTCTCAACCAACAGTGATAATAATACTGTTGATacacttaatttaaattctccTCGATCAACTACTGGTATACAGATTCTTCATTTGAATGCTACTCCTCCAGAGCAGCATTCAGctgtttattaa
Protein Sequence: MNPEHNIQSQGNNQPVVEDVASLLSSDSSLLLSGPNSNISGNQSSSIHIPTSLIDSHNINNSTSLSLSSSHHSGPLTSISNHHHHLQNHQHQQQHNQHQDLIHIHNSGGSIGLVNLDNTTNININSSNKDLKVLDSHSHLQHHQLNLHHNTHPSLNHISHQLSANHHHQLQSPQHQVLQTHSDLGGHIDSLPVIKDEKLDDNCRLLIPQPHQNQLQLSTHILGPQTEIKTQTTPYMVDVRSADGTFIKLLDQPELGKALGGEMYKVNIEDLSQFLNYHEVFGKLPGDLLTGAPALQAACTTTSVGSIVTPNPVVVSSIVTNSTSNSIVTNNSLVSSSAALPNALGIGIPKIETDTLAIVDPAGNSITIASHTCDICGKKFQFQYQLIVHRRYHNERKPFTCQVCGQAFTTTTDLTSHGKSHIGGTMFTCTVCFHVFANDASLERHMKRHSTDKPFACTTCQKTFARKEHLDNHIRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYMNHVMWHTGETPHQCTVCNKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGYCDKTFTRKEHLVNHVRQHTGETPFKCSHCPKAFTRKDHLVNHERQHTGESPHKCTFCEKCFTRKEHLTNHVRQHTGESPHRCHYCSKSFTRKEHLTNHVRIHTGDSPHRCEFCQKTFTRKEHLTNHLRQHSSENPHCCNVCSKPFTRKEHLINHMSRSHTGERPFQCDECGKSFPLKGNLLFHQRSHNKGQDAERPFSCDLCPKTFICKGHLVSHRRSHLGERPFACTQCGKTFVEKGNMLRHMKKHQLDTASQQIPPLEPQIIIAQQSTNQPLHLQSSSDTTTSAVSTVSLAPSATITSASEQHQQQLQQQHQHQQQQSTSMDTLSIITHASEASSVSTNSDNNTVDTLNLNSPRSTTGIQILHLNATPPEQHSAVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01276396;
90% Identity: -
80% Identity: -