Pcon007624.1
Basic Information
- Insect
- Ptychoptera contaminata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963942525.1
- Location
- OZ012637.1:27330927-27333323[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-16 2e-13 49.7 0.0 1 41 11 52 11 56 0.92 2 2 5.3e-19 1e-15 57.1 0.0 1 43 428 471 428 473 0.95
Sequence Information
- Coding Sequence
- ATGTCAACTGTTGCCGGACGACGTACATATACGGAAGAAGAATTACAAAATGCCTTGCAGGATATAATGAGTGGTAAGTTGGGTACAAGACGTGCGGCAGTACTTTATGGTATACCACGTTCAACGTTACGAAATAAAGTGTACAAATTGGTGTTGGAACAAAAGCGTGAGGCACCATTTCAGCCGCCTGTACTGGATGTACTTGATCCAGATCCAGATGAAGAGGATAAAGAAGTATCAGGTGGTGAAGATGAGAAGGACACTGAGAAAGCATCAACGTCAAATCAAATGGCTTTGCAAGAGGATTTAATGCGATTAACTGCACAGAATTTCATGAAGTATGGaaaaatgtatgaaaataGTGGCATTAAAACGGAAAATGTACTTGCAGAAGCTAtaaagcagcaacaacaacagcagcagcaacagcaacaacaacaacaacaatcacCTACACTGAACCAACCACCAACACCACCAATCGCAAATAATCCATGGTTAGACCCGAACCTATTACTGCAAAGTTTATTCATATCAGGTGGTCTCAGTGGCATACCCGGTTTAATGACTTCAAAACCAGAAGAATTTGCCtcattaagaaatttattactacAACAACAGGAGCTTATTAATGAGCATATGAAAAACGCGGTACCGTCGAGTGAGCATTTAAACAATGGGAAGCCAACGGATGCCCGAGCTCAAATGCAAAATATGTCAATGTTACAGCAGcatcaacaattattaaatcgGCTCAATATGAAATCAGAGACACCAGAAGGTGCAAGTTTATCCGATGTAAATGATGCCAGCGATGATTCTGCTGTGATACTTAAAATTCCGTCCTATAAACCAGTTGCTGGCTCCTCATATAGCAAAAATGGCGAGAGTCAATCACATTCCCAAACAACGACACCAGTACTATCAAGGAGTCCACAGCATCATTCCGGTATTTCGCCAGCACATTTCCAGCATCAAGGAAGCGAGTCAGATTCACCGCCTATGGGAACTAATATGTTTTCTTTGCGTGATGTCATTGCGAAAAGcataagcaaaaaatttaagCAACATTCACCCGATGTTTTAAAGCATTCGCCTATGCAAAATGATTCAATGGATCAGTATAAACGACCAAATATAtctgttataaaaaatttgggCGATGTAAGCCGTTTCGGCGCTAGCCCCAATATGGTTGGTAATTCATCACGCAACAGTTTGTTAAATGATCCAAATCAAGGTAAAGGAACACGTCCGAAACGGGGTAAATACCGTAATTATGATCGGGATAGCCTAGTCGAAGCGGTCAAAGCGGTACAACGCGGTGAAATGTCAGTTCATCGCGCTGGAAGTTATTACGGTGTACCACATTCTACTCTTGAGTACAAAGTAAAAGAACGTCACTTGATGCGACCAAGAAAGCGTGAACCGAAGCCTCAACCTTTAGATGAAACACGATCTGGTTCATCTTCTATAACACCAACTGCATCATCAATTGCTGGTGGCCCAAAAACACTGGATTTGGCATCTTCAGCGGCAAATAATTTGCGTAgcttagataaaaataaaagtctgAGTACAACCAAACCACCAGTGAAGACTCCTCCTTTTCCAGACACATCACCAAATGGCATGAAATTGCCGATGTTTGATTCAAACATGGCTGCCCAATTCCAATACGCACCACCTTTATTCTGGCCACATCCGCCAATGGGTGGAATGCCAATGGATTTTGCCCGTGGAACTAATTCTGCTGGAAACTACCCACCGAATGCAGAAAGCTTTTTAGCGTCCCAAATGATACAACGTTTTCAAGAGGACTCCAAATTCATTTCCAATTGTACTCCCACCTCAAGTGTAAAATCATCAACAAACAGTAGTACGCATTCCAAGAGTACACGGGAGTTGGCGGAAAGTCTCTATGACGGGGCAAGTGCAAATGGTTCCTCACTACTCGATGGTATAATTCGACATAGCTTAGATCGTAAATCTGTAGACATTCCTCATGGTGCTCTTTTGGACCAATTAGTTAAAAGCAACCGAACACCGAACCACTTATCATCAATAGTGACTGAAGATTCGACGAATAACCTGAAACGATCTGGCAGTCCATTGAATTTCGCTCAATCAGATATAAAACGTGAGCGTTTAAGCCCATTTTCTAGCGATAGCATAGAAAAAGATTCATCATCAGTGCCTGATCGAGATTTAACAAAAGAATCTGTCGAAAGTTTGTTCAAGATACGTGATAGATTATCACTACGAATAGATGATAGTACAGCAAACGTGCTTGCATTATCCACGAAAAGTCTATCTAATGACAACGAGCACAACGGTAGCATGTCCTCGTCAGATGAAAGATCACGTCGCATCTCTGAAAACGATGACAGCTCATAG
- Protein Sequence
- MSTVAGRRTYTEEELQNALQDIMSGKLGTRRAAVLYGIPRSTLRNKVYKLVLEQKREAPFQPPVLDVLDPDPDEEDKEVSGGEDEKDTEKASTSNQMALQEDLMRLTAQNFMKYGKMYENSGIKTENVLAEAIKQQQQQQQQQQQQQQQSPTLNQPPTPPIANNPWLDPNLLLQSLFISGGLSGIPGLMTSKPEEFASLRNLLLQQQELINEHMKNAVPSSEHLNNGKPTDARAQMQNMSMLQQHQQLLNRLNMKSETPEGASLSDVNDASDDSAVILKIPSYKPVAGSSYSKNGESQSHSQTTTPVLSRSPQHHSGISPAHFQHQGSESDSPPMGTNMFSLRDVIAKSISKKFKQHSPDVLKHSPMQNDSMDQYKRPNISVIKNLGDVSRFGASPNMVGNSSRNSLLNDPNQGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDETRSGSSSITPTASSIAGGPKTLDLASSAANNLRSLDKNKSLSTTKPPVKTPPFPDTSPNGMKLPMFDSNMAAQFQYAPPLFWPHPPMGGMPMDFARGTNSAGNYPPNAESFLASQMIQRFQEDSKFISNCTPTSSVKSSTNSSTHSKSTRELAESLYDGASANGSSLLDGIIRHSLDRKSVDIPHGALLDQLVKSNRTPNHLSSIVTEDSTNNLKRSGSPLNFAQSDIKRERLSPFSSDSIEKDSSSVPDRDLTKESVESLFKIRDRLSLRIDDSTANVLALSTKSLSNDNEHNGSMSSSDERSRRISENDDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01276190;
- 90% Identity
- -
- 80% Identity
- -