Pcon008915.1
Basic Information
- Insect
- Ptychoptera contaminata
- Gene Symbol
- bab2
- Assembly
- GCA_963942525.1
- Location
- OZ012638.1:1166230-1201455[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-11 3.6e-08 32.9 0.0 1 39 645 684 645 688 0.90 2 4 1.6e-12 2.9e-09 36.4 0.1 1 39 699 737 699 740 0.94 3 4 2.8e-16 5.4e-13 48.4 0.0 1 45 754 799 754 799 0.97 4 4 5.9e-19 1.1e-15 57.0 0.0 1 43 806 849 806 851 0.96
Sequence Information
- Coding Sequence
- ATGGCTGGAGGAAACATGGCATTGGGAAACACAGCCATGTCACAAGCatacacaaatttattaaatcaaacacAGATCATCTCGGATCCACAGTATTTTAGTTTACGATGGAATAACTATCAGAGTAATATGACATCGGTGTTTCACCAGTTGCTGGAGAGCGAAGCTTTTGTTGATGTTACATTAGCTTGTGAACGGGATTCACTTAAAGCACAcaaaGTGGTTTTATCTGCATGTTCAGCATTTTTCCAAAAGTTACTACTGGATAATCCGTGTAAACATCCAACAATTATAATGCCTTCTGATATATGCTTCTCagatttacaatttataattgaatttgtgTACCGAGGAGAAATTGATGTTTCGGAAGCTGAATTACagaGTTTATTACGTACCGctgaacaattaaaaataaaaggtttGTGCGAAGTAAGTGATCGTAGTGATACAACAACGGAGCCACCACCTCCTCCtacaaagaaacaaaaagcATCAACACATCATCAAGGAAAATCGGGTGTTTTATctgttgataatttaattaaaccaaCAAATACTAAAATTGGAACCAAAGCAAAAGTATCCACTTCGGCTACAGCGTCAAAATCAAAAGATTGTGGTAATTACAGTGAAATAGAATCTGCTGGCAGAGAACCAGCAACTGAAGGTAGTGATTATATTAATCCACCGACACAACAACACTATCATCATTTAAaccataattttaaaagtattgCTGACAAAAGTAATAAGTCACAAATACCATTATCGTCACCATCAGCATCACAGAATTCATCAACGACTACCCAACCATTATTTACCTGTGGTTCATCATTTGCGTCTGCAGCGGCTGGACTAACAGCAATTGGAAGTGTGGCTGGCAGTACAACATCATTATTTTCATcgattaaatattgtaaagaggaggacagagaaaaaaatgtacaaacatCTAATTCGTCTATAGTTGTACTAGAGCCTCGACCAGGTACACGTAAAACGCGTGACAGAACAATGACAAGTCTTGGTGTTGGAATGGGAAtgAATGGGGGTTTAATGGGAGTACCTTTAGGATTTCTTGACTTTGCTCCAGAACCACCAGCACCATCTGCCACACCAGTTACAGAACATATAGATATTAATTGCACTCCAAGTAACGATACTAGAGATTTATCAAgcTCAACACCGAACGGTGTAAGAATAAAATTCGAAACATTACGATCATTAGATCCATCAGAGACATTAGATATAGATAATCATATGTCGCAACATTCCATGCAGCAAATTGAGCAACAGCATCAACATCAACAGCATCAACAACAGATGCAACAGAGACATCAACAgatacaacaacagcaacagttgcaacaacagcagcagcaacaacaacagcaacagcagcagcaacaacaaagaCTAACACCACAATCAAGAACAGGAAAAGGAAGAGGAAGTAAAAGTAATACATCAACAAGTAGTCGCGGTAAGAAAGCAGGCGGTTCTGAAAGAAGGTCACCGTCTTCATCATCGTCCTCGACATCATCTTCAGGCGGTCGTAGAAGGCAACAAGAACAGCAACACAATCAGCTGATACAAAATCACAACGATCGCTCGAATTTAAAATCACCAAATAATCATcacaacaataatagtaatcatTCACATATTGAGTCATTAGCAAACGCAATCGATATGGATCAGTCCAGTGGTATGGAACATGAGCAAATTCATGGTATGATTGTGACACCAGAAATTGTCTCAATGATGACTCCTGGTCATATggatatgTACCAATCAGATACAAGCGAAGATTCTCGAATGATATCTAATGGTTCACccagtaatagtaataatccAAATAGAACACCAACCTATATAAATATGGATAATCCAAATGAGCCACGAACGCCTAGTGGACCAAAAACATGGACCCAAGATGATATGGAATCAGCCTTAGATGCCTTAAGAACTCATCATATGAGTTTAACAAAAGCTTCGGTTACATATGGTATACCATCGACTACATTATGGCAACGTGCCCACCGTTTAGGAATAGACACTCCCAAGAAAGAGGGAACACCAAAATCATGGAGTGAggattcattaaataatgcaTTGGAAGCATTGCGTACTGGAACTATATCAGCGAATAAAGCGTCAAAAGCATTCGGTATACCATCGTcgactttatataaaatagcacgCCGTGAAGGAATCCGTTTAGCAGCTCCATTTAATGCCGCACCCACTGCATGGACACAAGAAGATTTGGAAAGAGCTTTAGAAGCGATACGCGCAGGACATGCATCTGTCCAAAAAGCTAGTTCGGAATTTGGAATTCCAACAGGAACATTATATGGTCGATGTAAACGAGAAGGTATTGAACTGTCGAGAACAAATCCTACTCCATGGTCCGAAGACGCAATGATGGAAGCTTTAGAATCCGTTcgGGTTGGACAAATGTCTATAAATCAAGCTGCCATCCATTTTAACCTACCTTATAGTTCATTATATGGTCGTTTTAAGCGTGGCAAATACGAATCTGGAAGTAGTGGCAGCAGTGCTAATCATGGCAGTGGAAGTGCCAGTAGCGGTGGTGTCATAAATGCTCCAAATCATGGTCACAACAGTAGCTTGCTTGGTTTATCCGGTATTGCAAATGTTGGCGTTATGGGAATTGGTGGTAGCGTTGGTAGCATTGGCGTTGGTGGACTCGGCGGTGGAATACATATAGGCGGGGATACATCACATTCGGATCACAGTCCAGAACATACGcagCAACAGTATTCATCTGTCTTGTCACCGTCATCAAGCAACATTGTAAAAATTGTACATCCATTGGCAGTACCGCCGTCAACATCGTCCTCAACATCATCAGCTGTACTTATTCAGGATATGAATCAACAAGTTGTGAGTTCACcacttcatcatcatcaatttcATTTGCATCATCTTTACCATGTGCTATCACCAACAACAGAGCGTAGTTGA
- Protein Sequence
- MAGGNMALGNTAMSQAYTNLLNQTQIISDPQYFSLRWNNYQSNMTSVFHQLLESEAFVDVTLACERDSLKAHKVVLSACSAFFQKLLLDNPCKHPTIIMPSDICFSDLQFIIEFVYRGEIDVSEAELQSLLRTAEQLKIKGLCEVSDRSDTTTEPPPPPTKKQKASTHHQGKSGVLSVDNLIKPTNTKIGTKAKVSTSATASKSKDCGNYSEIESAGREPATEGSDYINPPTQQHYHHLNHNFKSIADKSNKSQIPLSSPSASQNSSTTTQPLFTCGSSFASAAAGLTAIGSVAGSTTSLFSSIKYCKEEDREKNVQTSNSSIVVLEPRPGTRKTRDRTMTSLGVGMGMNGGLMGVPLGFLDFAPEPPAPSATPVTEHIDINCTPSNDTRDLSSSTPNGVRIKFETLRSLDPSETLDIDNHMSQHSMQQIEQQHQHQQHQQQMQQRHQQIQQQQQLQQQQQQQQQQQQQQQQRLTPQSRTGKGRGSKSNTSTSSRGKKAGGSERRSPSSSSSSTSSSGGRRRQQEQQHNQLIQNHNDRSNLKSPNNHHNNNSNHSHIESLANAIDMDQSSGMEHEQIHGMIVTPEIVSMMTPGHMDMYQSDTSEDSRMISNGSPSNSNNPNRTPTYINMDNPNEPRTPSGPKTWTQDDMESALDALRTHHMSLTKASVTYGIPSTTLWQRAHRLGIDTPKKEGTPKSWSEDSLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTAWTQEDLERALEAIRAGHASVQKASSEFGIPTGTLYGRCKREGIELSRTNPTPWSEDAMMEALESVRVGQMSINQAAIHFNLPYSSLYGRFKRGKYESGSSGSSANHGSGSASSGGVINAPNHGHNSSLLGLSGIANVGVMGIGGSVGSIGVGGLGGGIHIGGDTSHSDHSPEHTQQQYSSVLSPSSSNIVKIVHPLAVPPSTSSSTSSAVLIQDMNQQVVSSPLHHHQFHLHHLYHVLSPTTERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277054;
- 90% Identity
- iTF_01277054;
- 80% Identity
- iTF_01277054;