Palb007733.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ptychoptera albimana
Gene Symbol
nfxl1
Assembly
GCA_961205885.1
Location
OY540804.1:474213-477259[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 1.8 6.3e+03 -3.0 1.4 14 19 188 193 188 193 0.86
2 19 0.31 1.1e+03 -0.6 0.8 4 10 224 230 223 230 0.95
3 19 1.4e-07 0.00048 19.8 16.9 1 19 238 255 238 255 0.99
4 19 3.3 1.2e+04 -3.8 1.8 5 10 280 285 280 285 0.93
5 19 0.00018 0.64 9.8 10.8 1 19 291 311 291 311 0.94
6 19 1.4e-08 5e-05 22.9 11.2 1 19 346 364 346 364 0.99
7 19 4 1.4e+04 -5.2 1.6 4 7 391 394 389 395 0.49
8 19 6.4e-08 0.00023 20.8 11.4 1 18 399 416 399 417 0.98
9 19 0.75 2.7e+03 -1.8 0.2 8 12 433 437 432 438 0.76
10 19 4 1.4e+04 -5.0 2.3 5 10 440 445 440 445 0.91
11 19 0.039 1.4e+02 2.3 16.0 3 18 453 468 451 469 0.91
12 19 2.2e-09 7.7e-06 25.5 12.2 1 18 478 495 478 496 0.97
13 19 0.013 47 3.8 11.4 9 18 542 551 533 552 0.91
14 19 0.19 6.6e+02 0.1 4.8 4 12 566 574 564 574 0.89
15 19 0.56 2e+03 -1.4 1.1 5 11 622 628 619 629 0.86
16 19 0.71 2.5e+03 -1.7 8.7 3 11 647 655 639 656 0.76
17 19 2.4 8.7e+03 -3.4 1.9 15 19 669 673 668 673 0.82
18 19 0.35 1.3e+03 -0.7 17.1 4 18 686 700 684 701 0.93
19 19 6.5e-06 0.023 14.4 14.2 1 16 750 764 750 769 0.94

Sequence Information

Coding Sequence
ATGTCAAGCTATCGTTCACCAACTAATCCATGgggtaatcaaaaaaattcaagTGTTTTACCTGAAATAGGCCATGGCTCGGATAATtctaaaaggaataaaaataaaaaaaagaatcagcCACCACAGCAACAAccgagtaaaaataaaattaccgaacaaaaattcaaggatgcacataataaaaatgttgaagcTGCAAAAAAGCATATTAAAGACTATGAGTCCAGTTCAGATGAGGAAGAATTACAGAATGACAATATTATAGaaaGTGTTTTTAAAGGTTACAGTGGTGTTTCCAGTGATTTAGAAAAGACTCAACAATTCCTTGAAAATACTTTTCAATCAGGCTCAGCGATTTGCTTGATTTGCATCGGAACCGTGAAGCGTGTTGATGCGaTATGGTCTTGTAGCAACTGTTTTTGCTTCTTCCATTTGCCATGCATCCAGCGATGGGCAAATGACAGTAtttcattgaaaaaattaCAAGCTGAAAAGGAGACtgcttattataataattctggTGAATATGTTCCAAAGAAGAAAATCACAATTGATTTTGATTGTCCCAAATGCCGTACAGTGTATTTACCGGAAGAGattcCTCGATATTATACATGCTTCTGTGGGAACGATACTAATCCACAATTCCATCCATGGTTAATACCGCATTCCTGTGGTGAAACATGTAAAAAGTTGTTACTTCCAAATTGTGGTCATCGTTGTGTTTTGCTTTGTCATCCAGGGCCGTGTCCTCCGTGTCCACAAATTATTACTAAGCTATGCAAATGTGAACAATCCAATCCAAAAACAATTAGATGCTCACAAAAAACATGGACTTGCTCAAAAAAATGTCCACAAATATTATCTTGTGGAATACATGTTTGCGGTCAGGTTTGTCATACAGCAAAATCGGAATGTCCATCATGTAAGAAACGAAGCGTGCAAAAATGTCGTTGTGGCAAAAAAACTGAAGAACGAAATTGCTCTTCAAGTACATGGTTATGTGATACGGTTTGTAATAAGCCATTTAAATGTGGATTACATAAATGCTTGAAAATCTGTCATACTGGTGATTGTGAAGAGTGTCCATTAGGTTTACCGAGATCATGTCCATGtggaaaacaaaaatccatAGCTCCCTGTTCGGAGCAAGTAGATTCTTGTGGCGGTACATGTCAAAAAATATTGCAATGTGGAATTCATGCGTGTACACAGCGCTGTCACAAAGGAGATTGTTCCCAGtgcgtggaaattattgaaaagaaGTGTCGATGTGGTTTGTACACAAAGGAATTACCTTGTCATAAGCAATTCACCTGTGAAACAAAATGCAGACTGATTCGAGAGTGCAAAAAACATCCGTGCAATAAGAAGtgTTGCGACGCCCAGTGCCCACCATGTGATAAATTATGCGGAAAGCCACTATCTTGTGGAAAGCATAAATGCAATTCTCTTTGTCATAATGGGGAATGCTATCCATGCAATAAAAAAGGACAATGTAAATGCCGATGTGGTCAAACGGTAGTTGATGTGCCTTGTGGTAGGGAACGTAAAACAAAGCTACCCAAATGTATGCTTCCATGCAGaatctCTTCGAAATGTCATCACGAGAATCCTCATCGTTGTCATCCCGGGGAATGTCCATCATGCatacaaaaatgtaatttacctAATACAACTACGAACTGTTTGCATTTGTGCGACTCAAAATGCCACGATTCGGTAAAAATTACAACCGTAGACAAGAACTTTAAACCGGCAGGGCCGTGGGATGTCCAGGTTCCAattgttgaaattaaaaaattatcgcaCCCACCTTGTGAAGTAAAAGTACCTGTCACATGTATTGGGGGCCACGAAACATGTCTTTGGCCTTGTCATAACTCAAAACCAACATCTTGTTATCGCGAATGCGGACGTTTGTTGAATTGCCTGAACCATTGTTGTACTCTGGTATGCCATGCTGTGCAAGATTTAACCTCAAAAACACAAGACGATTCATGTGCTCCGTGTCAACTAGGCTGCACGTTCACACGTCCAGAAGGATGTTTGCATCCTTGTAAAAAACCATGTCATCCACCACCTTGCACTAATTGTGGTGAACACATAAAATTATCATGTCATTGTGGCATAGGTGTAAAGTACTTCAAATGCAGtgcattttatttctctacagCTACAATGGATGATAAGGAACGGGAAAATATGTTATCATGTCAGAATCGCTGTACAAAAAATTACCCGTGTGGTCATCGCTGTAAAAGCGAATGTCATTCTGGACCCTGTCCTCAACCGGaactatgtaataaaaaagtaaaagtattTTGTGCATGCAATAGTAAAAAAATCGACGTTACTTGTGAAAAATTACGTTCAGGATATCACCTGGATTGCGATGATACGTGCAAGGAAAAGCTGGCAATTAAAAGAATGGCTGCTGAAGAAAAGGAGCGTAAAGAACGTTTAATTGAAGAAGAGAAGAATCGTTTGGAATTAGAAGAATTTGAGAAGAAGTTCGGCAAGAAAAAGTATAAAGATCGAAAAAAGAATGTCGTCGAGTTAAAGGAAagtaataactttatttactGGATTGGGAGTGCTGTCATTATTGGAATAATATCAGttctagtttattttattttctttattaaacaatag
Protein Sequence
MSSYRSPTNPWGNQKNSSVLPEIGHGSDNSKRNKNKKKNQPPQQQPSKNKITEQKFKDAHNKNVEAAKKHIKDYESSSDEEELQNDNIIESVFKGYSGVSSDLEKTQQFLENTFQSGSAICLICIGTVKRVDAIWSCSNCFCFFHLPCIQRWANDSISLKKLQAEKETAYYNNSGEYVPKKKITIDFDCPKCRTVYLPEEIPRYYTCFCGNDTNPQFHPWLIPHSCGETCKKLLLPNCGHRCVLLCHPGPCPPCPQIITKLCKCEQSNPKTIRCSQKTWTCSKKCPQILSCGIHVCGQVCHTAKSECPSCKKRSVQKCRCGKKTEERNCSSSTWLCDTVCNKPFKCGLHKCLKICHTGDCEECPLGLPRSCPCGKQKSIAPCSEQVDSCGGTCQKILQCGIHACTQRCHKGDCSQCVEIIEKKCRCGLYTKELPCHKQFTCETKCRLIRECKKHPCNKKCCDAQCPPCDKLCGKPLSCGKHKCNSLCHNGECYPCNKKGQCKCRCGQTVVDVPCGRERKTKLPKCMLPCRISSKCHHENPHRCHPGECPSCIQKCNLPNTTTNCLHLCDSKCHDSVKITTVDKNFKPAGPWDVQVPIVEIKKLSHPPCEVKVPVTCIGGHETCLWPCHNSKPTSCYRECGRLLNCLNHCCTLVCHAVQDLTSKTQDDSCAPCQLGCTFTRPEGCLHPCKKPCHPPPCTNCGEHIKLSCHCGIGVKYFKCSAFYFSTATMDDKERENMLSCQNRCTKNYPCGHRCKSECHSGPCPQPELCNKKVKVFCACNSKKIDVTCEKLRSGYHLDCDDTCKEKLAIKRMAAEEKERKERLIEEEKNRLELEEFEKKFGKKKYKDRKKNVVELKESNNFIYWIGSAVIIGIISVLVYFIFFIKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01276644;
90% Identity
iTF_01276644;
80% Identity
iTF_01276644;