Palb001855.1
Basic Information
- Insect
- Ptychoptera albimana
- Gene Symbol
- pnr
- Assembly
- GCA_961205885.1
- Location
- OY540801.1:20836962-20859510[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 2.2e+03 -2.0 0.2 22 29 15 22 12 26 0.74 2 3 2.9 5.2e+03 -3.2 0.1 5 15 581 591 581 594 0.82 3 3 5.3e-17 9.4e-14 50.4 4.4 1 35 623 656 623 657 0.98
Sequence Information
- Coding Sequence
- atgttagacgtggtATCACCTAGTGATGGTTTACCAACAGTTGTTTGTACCGAGTGTCGTGTACATTTGGACAAGTGTCATCGATTTCGCAAAGTAGCATATGGCGCACAGAAGGCATTGcaaagttttttaaaatatgcaACGAAATTAAGTGGTAGTCAGCAGGATGTACTAGAAAAAACATCTGAAACATTAGATGAACTATTAGAACCGTCCACATTACGTAAAGCATCTGAACGTACAGCTGTTGCCGCATTACAGGAATTAAGAAATACTGGTACTAGTGGTATGCTattaccaataaataaatcgataaaaCTTGAAGAGGATAATAAGGATTCatctgaattattaattataacatcATCGTCATCACCGTTAGAAGGAAGACATTTATCTTTACCAAATTCATTATCAATGTCGCCAAAAATATTGACACCACCAAGAATATCATCGCCTATGAATCATCAACTTCATATGTCATCATCAGTTACCTCAGTTATAAGTAAAAATCATCTTGACCATTTGGAAGCTAATTCTGTATCTGTGATACCAATTGATAGTAGCGGCAATGTGACAACATCAACAAATTCTTCATCACcagttaataattataataataataataataataatcataatcaatcGTCTACAGGgacaaatataacaaataatagttataataatCGGTCCAAATTACCATTaacagttaaaaatttatcacaacTTCAACGCTTAGAAACAGCAGCTGTGTTAATGGATATGAGTAAAAAAGTAATTGTTACGCCACCAAATTCAAATCCGCATTCACCACATCATAATATGGTTTCAACTACCAATACATCATCATCaagtattaatgaaaaacaacaaagtatTGCATCACCTGTGATAAAggctcaagattatgttttaaagaatttaaaacgATCAGGAAGTAGTGAAGAAATTGATTTAtcatttaagaagattaaaCTACAACTACCAAAGCAATTGcaacatcagcagcaacagcagcaccaccagcatcatcatcagcaacaacaacaacaacaacagcatcatcataatcaacataataaacaaatgaagCAAGAAAATTCTGTAATCCAATCAAATGAATTATATGGTGAAGATTATAGTCAACAAAGTGATTCTAATGATAGTTCTGATCCGGGACGGCTACAAGTTGATATTCAGGAAATTTCCGAAGATAACgacattgataataatataaattttgtcaataaaataaaaaagacttCATCGCATACGTCTGGACGTGATAGTAGCGGAAGTTGTAGTGGCGGAACAATGGCTACGAATTTAACAACCGGAAAGTCTTCATCACGTAAATCATATGATATTGGACGTGAAACACCGGATAGTTTAATATCCTCAGATGATCACCATGGTGGTAATAATGATGTAACTGATCCAGCAACAACACAGCTGTGGCAAGCATTAGCGCAAACTACTGTTAATGGTGGTGGTGCTAATCACGCTACACAATTATTACgtcaaatgataaataatcgAACATTGGGTTTAACATTGCCTGCATTGGGCTTGCATTTAGAACAGCCCATGTCTCTACTGaagagtgATATGCCGTCAGATCGCCACGTTCAATCATCAAAATCGTCAGGACGTCGAAAACAATCATGTCCAAGCCGGGCGCCATTGGAGGAGGTTGATATGTCTCTAGATGTGTCATTAATTGATACAACAAATGATTTTGGTACTGCCAATAGCCAGCAGTGGAATACAGATGAAAGAGTAAGCAAGGGTTCTTCGGCTCAAActcataataataagaataacaatcagcaacagcagcagcagcaaaataaCAAAGATATGTCTTGTACAAATTGTGGTACATTGACAACTACTATTTGGCGACGTAATATGCGTGGAGAAATGGTTTGCAATGCATGTGGTCTATACTTTAAATTACACGGTGTAAATCGTCCACACACAATGCGACGTGATACAATACATACTCGCCGAAGAAGGCCAAAGGGTGATAAATCAAGTAGACGAAAATCAAAAGCTGTTCATGTAGAACAAGAACAAATTGAAACGATAGAACGAACAAGCAGTGGAGGTGGAGCTGGCGGTGGTTCTGGTGGTAGTAATACTCAAGACTTACAAGCACTACAAAATCATAATCTGTTAATTGCCTTAGGTGGTGTTGCTCGGGGAGCTGGATCACATTTTCCGATGCCTCACTATTCTCATTTTTTGCGTGCCTCACATAATTTTCCAGATGTAactataattgaaaataatggtaatatcggtggtaataataataatcttgatATACATACTGTTGATGACGACAGTGATTGTGGTGAAAATGAATCTGAAACATGTAATCTACCATTAAATTTAGTATCAACACAATTAGGTAGTGGCAATTGTAGTGATTCATCACAACACTGA
- Protein Sequence
- MLDVVSPSDGLPTVVCTECRVHLDKCHRFRKVAYGAQKALQSFLKYATKLSGSQQDVLEKTSETLDELLEPSTLRKASERTAVAALQELRNTGTSGMLLPINKSIKLEEDNKDSSELLIITSSSSPLEGRHLSLPNSLSMSPKILTPPRISSPMNHQLHMSSSVTSVISKNHLDHLEANSVSVIPIDSSGNVTTSTNSSSPVNNYNNNNNNNHNQSSTGTNITNNSYNNRSKLPLTVKNLSQLQRLETAAVLMDMSKKVIVTPPNSNPHSPHHNMVSTTNTSSSSINEKQQSIASPVIKAQDYVLKNLKRSGSSEEIDLSFKKIKLQLPKQLQHQQQQQHHQHHHQQQQQQQQHHHNQHNKQMKQENSVIQSNELYGEDYSQQSDSNDSSDPGRLQVDIQEISEDNDIDNNINFVNKIKKTSSHTSGRDSSGSCSGGTMATNLTTGKSSSRKSYDIGRETPDSLISSDDHHGGNNDVTDPATTQLWQALAQTTVNGGGANHATQLLRQMINNRTLGLTLPALGLHLEQPMSLLKSDMPSDRHVQSSKSSGRRKQSCPSRAPLEEVDMSLDVSLIDTTNDFGTANSQQWNTDERVSKGSSAQTHNNKNNNQQQQQQQNNKDMSCTNCGTLTTTIWRRNMRGEMVCNACGLYFKLHGVNRPHTMRRDTIHTRRRRPKGDKSSRRKSKAVHVEQEQIETIERTSSGGGAGGGSGGSNTQDLQALQNHNLLIALGGVARGAGSHFPMPHYSHFLRASHNFPDVTIIENNGNIGGNNNNLDIHTVDDDSDCGENESETCNLPLNLVSTQLGSGNCSDSSQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -