Palb006550.2
Basic Information
- Insect
- Ptychoptera albimana
- Gene Symbol
- pnr
- Assembly
- GCA_961205885.1
- Location
- OY540803.1:23450353-23452046[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-18 8.6e-15 53.7 3.2 1 34 128 160 128 162 0.97 2 2 7.3e-19 1.3e-15 56.3 6.2 1 35 184 217 184 218 0.98
Sequence Information
- Coding Sequence
- atGTTTCATACGGCATCAGCGTATTCTGATATGACAGGCGGTGGAGTTCCGAATGCAGCATCATTTCATCAAAGTGGAGCTTCAGCGGCGGCTGCGGCGGCCGCAGCAGCTGCTGCCGCTGCTAATACACCGGTCTATGTTCCCTCTAGCCGTGCCCTACAACACTCACAGTATGCTCCAGCTAGTCATTTTAATGGTGCAGTTTCTGCACAGAATGGATGGCCAACCGACGGCTTTGGTTCGACACACTCACAGTTACCGCCACAATTTTATGCACAAAATGCAGTCATGTGGCGCGCCTACGATCCTACAGGTTATCAAAGAACTTCACCGTATGGAATGGaaagTGCAATGGATTTTCAATTTGGAGAGGGCCGAGAGTGTGTTAATTGCGGTGCAATATCTACTCCATTGTGGCGACGAGACGGCACAGGACATTATTTGTGTAATGCCTGTGGTCTGTATCATAAAATGAATGGGATGAATCGGCCTTTAATAAAGCCGAGCAAAAGACTGGTGAGTACAGCAACCAGGCGACTTGGACTGTGTTGTACGAATTGTGGAACACGAACAACAACATTATGGCGGCGAAATAATGAAGGGGAACCAGTTTGTAATGCATGcggattatattttaaattgcaCGGAGTAAATAGGCCATTGGCAATGCGCAAGGATGGGATTCAAACAAGAAAACGTAAACCTAAGAAGAATGGAAGTGGTGGAAGTTCGAATGGGAATAATGATATTTTACATAGTTTAGGCAAAAAGGATGATCTTATCGAAGATGTGAAGCCAAGTTTAACGAATTCTAGTGGTGGCGGCGGAGGCCCTCCATCAACACAATCATTACACTTGCTGGACCGGAATGGTAACACAAAGCATTTAACATCAATTGTCGGACATTCCTCCAGTCCCAAATCTGTATCGGTGTCATCACATTTATCATCGCCACGctctcatcatcatcatacgTCATCACATCACCTTGTCGGTTCCCATCATGCACCAGCATATAGCTTGGCGGGTACAAGTGTTTCCCATTCGCATCACTCTACCAGCCTAGTGTCATCAATTGCACCCAATGTTACTGTTAAATACGATCTGAACGGTGTCGGCAATAGTAATATTGGACCAGTTTCATCACATTTGCATAGCACACCGAGCAGTTACTTGCATCATGCAGGTGGTTTCGGTAATGTCAAGGCTGAAGTGCCGGTTAGCAATGGAGCCGGTGTTGGCGGTGGAGGCTATGATTACATGAACAATTGTATTCAAAATGGTTATTTTGGAAGTTCATTCGGTGGGCTCGCACCACCAGCCGGGTCACATGCAGCTGCTGAACTAGCCGGCTACCATCATCAACACAACGTTATTCAAGCAGCCAAATTAATGGCTACATCCTAA
- Protein Sequence
- MFHTASAYSDMTGGGVPNAASFHQSGASAAAAAAAAAAAAANTPVYVPSSRALQHSQYAPASHFNGAVSAQNGWPTDGFGSTHSQLPPQFYAQNAVMWRAYDPTGYQRTSPYGMESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKNGSGGSSNGNNDILHSLGKKDDLIEDVKPSLTNSSGGGGGPPSTQSLHLLDRNGNTKHLTSIVGHSSSPKSVSVSSHLSSPRSHHHHTSSHHLVGSHHAPAYSLAGTSVSHSHHSTSLVSSIAPNVTVKYDLNGVGNSNIGPVSSHLHSTPSSYLHHAGGFGNVKAEVPVSNGAGVGGGGYDYMNNCIQNGYFGSSFGGLAPPAGSHAAAELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277348;
- 90% Identity
- iTF_01277348;
- 80% Identity
- -