Basic Information

Insect: Ptychoptera albimana
Gene Symbol: -
Assembly: GCA_961205885.1
Location: OY540802.1:3374591-3376985[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.3e-05 0.0046 17.0 2.3 1 23 228 250 228 250 0.98

2 11 6.2e-06 0.00034 20.6 1.0 1 23 256 279 256 279 0.96

3 11 3.5e-05 0.002 18.2 2.2 1 23 285 307 285 307 0.98

4 11 2.7e-06 0.00015 21.7 0.3 1 23 313 335 313 335 0.99

5 11 0.00013 0.007 16.5 1.2 1 23 341 363 341 363 0.98

6 11 0.00016 0.0087 16.2 1.4 1 20 369 388 369 390 0.96

7 11 0.051 2.9 8.2 6.1 1 23 398 418 398 418 0.97

8 11 4.4e-06 0.00024 21.0 0.1 3 23 426 446 425 446 0.99

9 11 1.9e-05 0.0011 19.0 1.1 1 23 452 474 452 474 0.99

10 11 0.041 2.3 8.5 1.2 1 23 480 506 480 506 0.88

11 11 0.052 2.9 8.2 0.5 1 19 512 530 512 533 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.3e-05	0.0046	17.0	2.3	1	23	228	250	228	250	0.98
2	11	6.2e-06	0.00034	20.6	1.0	1	23	256	279	256	279	0.96
3	11	3.5e-05	0.002	18.2	2.2	1	23	285	307	285	307	0.98
4	11	2.7e-06	0.00015	21.7	0.3	1	23	313	335	313	335	0.99
5	11	0.00013	0.007	16.5	1.2	1	23	341	363	341	363	0.98
6	11	0.00016	0.0087	16.2	1.4	1	20	369	388	369	390	0.96
7	11	0.051	2.9	8.2	6.1	1	23	398	418	398	418	0.97
8	11	4.4e-06	0.00024	21.0	0.1	3	23	426	446	425	446	0.99
9	11	1.9e-05	0.0011	19.0	1.1	1	23	452	474	452	474	0.99
10	11	0.041	2.3	8.5	1.2	1	23	480	506	480	506	0.88
11	11	0.052	2.9	8.2	0.5	1	19	512	530	512	533	0.85

Sequence Information

Coding Sequence: atgccaaaaacaatgaaaaaaaaattgacaaaattgTCAAATGCAGAATCACCATCACCATCGCGAACACCATCACCATTAACAACGACAtcatcatcagcaacaactacaacaacaacaaccggtggtggtggtaataaagttttaagaaAACGTAATTATGGTAAAGAGTCACCAAAATCAGTGATATCCGAGTCATTAGAATCTGAATATAATTTACTAGATACcgatgaACAAAATGAtgttaatgatgatgatgaagaaaaaattacaatactCGAACAGGATAAACATGATGatgatcataataataatgggaatatagaattttataaaattattaatgataattataataataataataataatataaatgattttattgcaataaagACAAACCTTAGTCGTAGCAATAGTAATACAAGtaatcaaatagaaaattgtaatttacatGATATTGGTGTTGTTGATGGTGCTGTTGATGGTGATGGTGACATTGGTGATCATTGTAGTGATACAAATGGAAGTATATCATCACTAAGATCTGATAATAGTAAATATACAACAAGTTCATCAatagctaataataataataatgaggaTAGTCAAAAAAGTCATAGTAATTCAGGgaggaaaagaatttttgccCATCGTATACGTCGTAATGAacgtaaaaaatatatttgcacAATATGTCATAAGAATTTTCAGGGTCTAAATGATTTACGTAAACATACGCGGATACATAGTGATGAGCGTCCATATCCATGTCCAAATTGTGAGAAGAAATTTCGTCAGGctggttgtttaaaaaatcatatagCATCACAACATGGCACCGATGTACTATTCATTTgtcattattgtaataaatcgTTTCCGATAAAGGAACGTCTTCGGTTGCATTTACGTATTCATACTGGTGAAAAACCTTACAAATGTAGTATTTGTCCTAAACAATTTGCACGTGGCGGTCAGctGACGCAACATCTTTTAACGCATAATGGAATAAAGAAGTATCGTTGTGAATATTGTCCAGCAGCTTTTTCATGCCtgtctaatttaaaattacatatGAAGGGACATCGTGATGAACGTGATTACACATGTCATATGTGTGGAAAAggATTTTTACGTCCGGATGCATTAAAAAAGCATCTCCTTTGCTTCCATGGAAATATAAAGGCGTTTCATtgtaaaatatgtaataaaatgtttaaaggaCATTTGCCGCAGCATATGCGTAcgcataaaaaagtaaaaccacATGGCTGCGCTGAATGTGGTGCCGCATTTTCACAACGTTCCCAATTAATTGTGCATCAACGAATGCATTCTGGAGAACGTCCTTATCGTTGTCAGgTGTGTTGGCAGGCATTTGCGCATTCAAGTGTTTTGAAGTTACATATAAGAAAGCACACCGGtgaaaaaccttttaaatgtCCATTATGTGTTGTGTCAGAGTCGGCATTCTCACAGTTACCACATCTAAAGAAACATATGAAGGCAATACATGATCAAGAGAAATCATACATGTGTGAAGTGTGTAACGAATTCTTCAAGACAAAAATTGAGCATCAACAGCACGTATCAATGTGTTTAAAATTTGCAAACGATCCAGACTCACTTCCTGACTTTGTtgatattaaagtGCCTGTGAGTATTGGTGTTGAGCCAGCAATGGCATTAAGCCGAATGCGTTTATTAGTTGCtgttttattgaaaagaaTTTCCACCGAAGATCGTTTAAAGCAATTAGGTTTTGAAAAACGTTTAATCGATAATGTATTAATTGGATCATTAAAGCTCGCTGGTCGAAATGTATGTGAAGATGAAACAATACATGAATCGgaacgtttaaaaataaatgttcagGAATTACTTGAGTGGACAGTGCCCGACCAGTATAtggataaatttaaaaaagaacaaCGCAGCACCGAAGAATTATTAGAAGAATTAACTAGCTAA
Protein Sequence: MPKTMKKKLTKLSNAESPSPSRTPSPLTTTSSSATTTTTTTGGGGNKVLRKRNYGKESPKSVISESLESEYNLLDTDEQNDVNDDDEEKITILEQDKHDDDHNNNGNIEFYKIINDNYNNNNNNINDFIAIKTNLSRSNSNTSNQIENCNLHDIGVVDGAVDGDGDIGDHCSDTNGSISSLRSDNSKYTTSSSIANNNNNEDSQKSHSNSGRKRIFAHRIRRNERKKYICTICHKNFQGLNDLRKHTRIHSDERPYPCPNCEKKFRQAGCLKNHIASQHGTDVLFICHYCNKSFPIKERLRLHLRIHTGEKPYKCSICPKQFARGGQLTQHLLTHNGIKKYRCEYCPAAFSCLSNLKLHMKGHRDERDYTCHMCGKGFLRPDALKKHLLCFHGNIKAFHCKICNKMFKGHLPQHMRTHKKVKPHGCAECGAAFSQRSQLIVHQRMHSGERPYRCQVCWQAFAHSSVLKLHIRKHTGEKPFKCPLCVVSESAFSQLPHLKKHMKAIHDQEKSYMCEVCNEFFKTKIEHQQHVSMCLKFANDPDSLPDFVDIKVPVSIGVEPAMALSRMRLLVAVLLKRISTEDRLKQLGFEKRLIDNVLIGSLKLAGRNVCEDETIHESERLKINVQELLEWTVPDQYMDKFKKEQRSTEELLEELTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -