Basic Information

Gene Symbol
ZBTB41
Assembly
GCA_961205885.1
Location
OY540802.1:35931137-35935207[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 2.9e-05 0.0016 18.5 0.7 1 23 157 179 157 179 0.95
2 15 0.00037 0.02 15.0 2.0 1 23 185 207 185 207 0.97
3 15 0.00058 0.032 14.4 0.3 1 23 301 323 301 323 0.98
4 15 0.0096 0.53 10.5 0.9 1 23 329 351 329 352 0.96
5 15 4.2e-05 0.0023 18.0 2.7 1 23 380 402 380 402 0.97
6 15 0.0036 0.2 11.9 0.2 1 23 411 433 411 433 0.94
7 15 5.2 2.9e+02 1.9 0.1 2 10 440 448 439 462 0.76
8 15 0.18 10 6.5 1.3 3 19 471 487 470 488 0.95
9 15 4.2e-05 0.0023 17.9 6.4 1 23 497 519 497 519 0.97
10 15 0.014 0.76 10.0 0.8 2 23 525 546 524 546 0.96
11 15 9.3e-06 0.00052 20.0 0.4 1 23 554 576 554 576 0.98
12 15 0.00024 0.014 15.5 0.2 3 23 584 604 582 604 0.97
13 15 1.7e-05 0.00094 19.2 0.2 1 23 610 632 610 633 0.95
14 15 0.0019 0.1 12.8 1.4 1 23 647 669 647 669 0.97
15 15 0.019 1.1 9.6 0.0 1 20 1111 1130 1111 1133 0.94

Sequence Information

Coding Sequence
ATGGAAGTATCTGAAGAAACGTTTGAGATATTTTTGGACGGGGAGGAGGTAGAACAAGATGTTACCGAGGAAGTTATAATGGAAGCGCAGGAGAATGAGGAACATGTCGAAGAAGAATatttggtGGGTGAAGAGATTATACCTTCTTCTGAAATCAACGTAATATCAAATAGTTTAGATCATATAGCtgcagaaaatttaatttatatggcTCAAGATAATACTGTGTCAATGGGTGATTTAATTGAGGAACAGGTAGAACAAGCTGAAAATGCTGATTATAATGAGCAACAGTATTTTGAATGCCAAGTAACTGAAGAAGTAATAACTGATGATTGGGTACAGCCACAAGGAGAAGAGagagtGGAAATACCGGTTGATCAATTGACAATCCATACTGATGAACAAATTGAAGAAGTTGATGTACCGTTACCAACTGACCAAGATGAGTATACAACTTCTAGGCCATATCCATGTGATTTTTGTAGCAGGCGATttagaaaaaaagcaaatttaatgaACCATATGGTTGCCCATCAAAATGACAGACCTCACGTTTGTAATTTATGTGGTGCTAGATATATCCGTAAAtgtgatttaataaatcatttaaaaatacacGCGTATGTTCCAGATCAAGAATTAGATGATAATAatgaaaaagaagaaactattgtttcaaataaacgaaatagtCATCAGACACAATCAAATTATCCTCAAAAGAAACGATCTAAAAATGTAAGCACggggaagaaaataaaattagagcaATTCGGTGAAACAAAGTTTAATTATGTAGATGAagatatgaaattattatcagAAGCTGCACAAGAGCATGAACATTATGTACAAATGAGAGAGGAACAATATCCTGTTGTTGAtcctaaaaaaccatttgttTGTCAACACTGTGGTGTTGGTTTTGCAAGAGATAAAGCTTTAGCTTCACATTCAAGGaTGCATGCTGGAGATTCACCATTTGAATGTGAGTCATGTAGTGAAATGTTTTGGGACGTTTCTTTACTACAAGAACATCAAAAAACACACCATTCTGGTTATACGAGTAATTCGGAATTTGAACCAGAAAATGAagaggATACAGATTCTGAAAGTAATTCAAAGTATGGTgaattttattgtgatttatgTGGAATGTCGTTTCATCGTCAGGATTTATTAAAGCGACATTCCAAAatacatattaaaaaagaaatgtatgaGGGACATTGTTGTAATGTTTGTGGAGAGGCATTTTCTGAAGCGTTAGATCTTTTAGCACACGCTGAGGTGCATGCAAGAGTTGTTCCTTTAAAatgtTTGTTGTGTGGTGAAACTTTTTTGGAAGAAACTGCAATAAAATCGCATATCGGTGACATACATTCAAAtgaattacaaacaaattcaTGCCGTTTATGTGGTAAGCTATGTCGAGATTCCAGGGCATTAATGAAACATTCTTGGGATCATTCAAGGGAGAAAAATCATTCCTGTTCAAAATGTGGCAAAACATTTCACAATAAGGctagattaaaacgTCATATGTTGTCCCATCGTAATAAAACTGTATCGTGCGATAAATGCGATGAAGAATTTCCAGATGGTCGTTCATTGATGAATCATAAACATTCACATAACAGTGTTTCTGGTAGACAATTTCCCTGTCGAGAATGTGGTAAAACATTTGGTTCTAGAAGTTCACAACAAATACACATTAGAATACATACTGGTGAAAGACCATATGGATGTAAATATTGTTGGAAAGCATTTGCTGATGGTGGAACATTAAGAAAACATGAAAGAATACATACGGgagAGAAGCCTTATGCATGTCCTGTATGTCCTAGAGCATTTAATCAACGTGTAGTATTACGAGAACATATTCGTTCGCATCATTCTGGACCAGATGCAAAACGAGGAAATATTATGTCACCTTATCATTGTACTGTGTGTTCTACACAATTCTCAACATCGCTAGACTTAATACAACATTTAATACAGCATAGTGATTTAAATACTGCAATGAAACGTCAACCACCGagCGGGCCACGTAAATATAAGCGAAGAAGAAAACTAAAACCACATGAATTAGAAAGGCTACGCGCTGAGCGTGAAAATGCTAATGATTTGGGTTTTTCCGACGATGAAGAATTATCAGCAAATGATGGTGACTTTAATGAcagttcaattaaaaataaagtcacAGCACCTACTAagtcaaataataatacaacaacgCGATCATCAACAAGTAACAAAAAGAATGCTTCGTCAAGTTTAAAATTGAATCAAAACGCAGATTATAATTCATTCTTTGAAGATATGGATGACACATCACcgcaaaaacatgaaaaatcaaTATCTCCACCTCCTAAACCAGCTCCCAGAGCAACAACACGAAAACGAGTAATCAAACAAGAGGTGCATATGCAGCAGCAACCTTCACGGCCAAAAATGATACATACGCAGAAAACAAAGGTGGCCGTAGAGGACGGCAggaagaaaacgaaaacattaattacGCGAATACAATCAAAAGACATTCCTGATTctgcatcaacaacaacacgtCACGGTGGAATTGAACGGAATCGTCCTAGGaccaaaaatgttaattatcaCATTTTAACGCCGGAAAAATTACCAAATGCCACTTTTCCTGTGGACGGAAATAATTTtagtgaattatttaatatcaagGTAGAGAAGGATAATTCAAATGCAGCGATTAATTCATTACTTGATGCAGAGAGAATATTACAGGGTCTGCCAAAGAAAAGCTTAGATAAATACCCAAGTGATATTGTTCATGATTTGGAAGAAATTTTGAAGCCAGTACAACAGACATCACCTCAGAGTAGTAACATTGATCCGTATGCGAACAGCAATAGAAAAAACATcactaacaataataataataacaataataataataatagtagtagtaataataataataataataataataataataataataataataataataataataatagtaatagtaataataataataatattgtggaaaatattacaaaatctCCACCAGTTGGTAGGCGGCGAACAAAACGTAATATTCCGTTAAAAACAATTCCGGTAACAAATGCAAATACATCACGTATAGCAACACGACAAACTCGTAATAATCGTGAACATATGTCTGGCAGTAGTAGTAccggtaataataattcatcaaattttaaaacggataataataaatcgataAAACGGGAGAAATTCGAAGGAACAGATAATGATGATCAATcccaatatatttatataaaacaggaGAAGCCCGAAGAAGagattattgaaaattataaatgtgaaATGTGTTCGGCAATATTTTCAGAGCGTGCTCAATTGCTTGTACATGTGCCCATCCACAtttga
Protein Sequence
MEVSEETFEIFLDGEEVEQDVTEEVIMEAQENEEHVEEEYLVGEEIIPSSEINVISNSLDHIAAENLIYMAQDNTVSMGDLIEEQVEQAENADYNEQQYFECQVTEEVITDDWVQPQGEERVEIPVDQLTIHTDEQIEEVDVPLPTDQDEYTTSRPYPCDFCSRRFRKKANLMNHMVAHQNDRPHVCNLCGARYIRKCDLINHLKIHAYVPDQELDDNNEKEETIVSNKRNSHQTQSNYPQKKRSKNVSTGKKIKLEQFGETKFNYVDEDMKLLSEAAQEHEHYVQMREEQYPVVDPKKPFVCQHCGVGFARDKALASHSRMHAGDSPFECESCSEMFWDVSLLQEHQKTHHSGYTSNSEFEPENEEDTDSESNSKYGEFYCDLCGMSFHRQDLLKRHSKIHIKKEMYEGHCCNVCGEAFSEALDLLAHAEVHARVVPLKCLLCGETFLEETAIKSHIGDIHSNELQTNSCRLCGKLCRDSRALMKHSWDHSREKNHSCSKCGKTFHNKARLKRHMLSHRNKTVSCDKCDEEFPDGRSLMNHKHSHNSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCKYCWKAFADGGTLRKHERIHTGEKPYACPVCPRAFNQRVVLREHIRSHHSGPDAKRGNIMSPYHCTVCSTQFSTSLDLIQHLIQHSDLNTAMKRQPPSGPRKYKRRRKLKPHELERLRAERENANDLGFSDDEELSANDGDFNDSSIKNKVTAPTKSNNNTTTRSSTSNKKNASSSLKLNQNADYNSFFEDMDDTSPQKHEKSISPPPKPAPRATTRKRVIKQEVHMQQQPSRPKMIHTQKTKVAVEDGRKKTKTLITRIQSKDIPDSASTTTRHGGIERNRPRTKNVNYHILTPEKLPNATFPVDGNNFSELFNIKVEKDNSNAAINSLLDAERILQGLPKKSLDKYPSDIVHDLEEILKPVQQTSPQSSNIDPYANSNRKNITNNNNNNNNNNNSSSNNNNNNNNNNNNNNNNNNNSNSNNNNNIVENITKSPPVGRRRTKRNIPLKTIPVTNANTSRIATRQTRNNREHMSGSSSTGNNNSSNFKTDNNKSIKREKFEGTDNDDQSQYIYIKQEKPEEEIIENYKCEMCSAIFSERAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01277136;
90% Identity
-
80% Identity
-