Palb002096.1
Basic Information
- Insect
- Ptychoptera albimana
- Gene Symbol
- CSRNP3
- Assembly
- GCA_961205885.1
- Location
- OY540801.1:24623510-24627228[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.2e-96 1e-91 306.4 11.2 2 218 220 420 219 420 0.92 2 4 0.22 3.1e+03 -2.5 1.2 41 114 558 628 552 642 0.53 3 4 0.42 6e+03 -3.4 5.7 63 86 741 764 724 803 0.39 4 4 0.079 1.1e+03 -1.0 2.1 63 103 798 837 765 858 0.39
Sequence Information
- Coding Sequence
- atGTTGAAAccatttaaaacgtttttaacaTATTTGCAAAAGAATGCAAATAGTTCATCAATATTTGGaatatcaaatacaaatacatCTGAGGATGTTATAATTGAAGATGAAGTGGAAATCGATTCATCAGAATTAATGACCGTTGAAAATTGTGATGATCCATTAACAGACCCATTAGCAttggatgatgatgatgattgtgCTAcagatataataaatattaataataatataacaaatgtTGAACATAGTATTATAAGTAGTACAGGGATTACAATAAGGCCAACAATACCATCATTAACTGATTTAGATAACTCAactgataatgatgataatcgtattattattgttgatataaataaattaaagaaaggttGTATTGATGAACATAATAtttctgataataataatacaacagcACCAAGTAGTGAAACAGAGCCGGATGATAGTTTCACATCACCATCATTAGTGTTGGAGGAGGAAACAGTTGAACGTAGTGACGGTTCCGATTCTGGTTTAGGTTCTGAAATATCCACATCGACAATCTTATCAACAACTGTCAGCGACATAAATTCAACCATAAgTGAGGATAAACCGCTTCGTAGTAATTTAAAACGACATTTGGAGAGTAGTGATAATGTAGAGACAAAACGTCAGAAACGTGGAATTACATTTGAGGGTGttactgtttattatttttcacgtATACAAGGATTTACTTGTGTGCCATCACAAGGTGGTTGTACGCTTGGAATGGCATCTCATCATATGGGTTTTAGaACATTTACTTTATCTGAATATGCTGCTGAGCAACGTCGTTCACATAAACATCAATTACAAGAGTTAAATCCTAGAAGTTCCTCAagtgaagaaagtgatagcgATGATGAAGCAAGTGAGAATAGTGGTTCTGAAGTAGACGCAGAATCGTATGCGTTTTTGCAAGCGGTTTCTCCACGTCAGAGACGTGCTTTATTAAAAGCGGCTGGTATAAGAAAAATCGATACATCGGAAAAAGACGATTGTCGTGCCATACGTAGCTCAAGAGAATTTTGTGGTTGCGATTGTCGTGACTATTGTGATCCAGAAACTTGTGCATGTAGCCAAGCCGGTATTAAATGTCAGGTTGATAGACCGAGTTTCCCATGTGGTTGCACACGTGACGGCTGTGCAAATGTCGCTGGACGCGTTGAATTTAATCCGTCTCGAGTTCGTACACATTTTATACATACAATAATGCGATTGGAATTggagaaaaaacaaagaaaatcagAAGAACaaatatcattaaataattataatgtaaGGCAATGGTCGCCACATGTGCGATTACCGATACTAGATATGGAGAcgttaaataattgtaattattataacaatcaAATGGTGCAGGTTAATCATTGTAATGATTTATCGTCAGCATCAAGCAGTCAACAGTATGCAGCAGATGTGCCAGTTGTGGGTCATCAACAGTCATATCAGCTTCAAATGAATAATCATATGTTAAGTCTGGGACAACGTATGAATACTAATGCAGTCGGTCAAATAGGTTGTATAAATGGTAATGGTGATGAATCATTAGATTTACATTATGCATATAGAGATGACTATACCACTGTAGATGGACTAGATGCAGTAACAAATACTACGCCTAATACGAACTACCGATCACCACAACAATTGGTATTAAATGAGCattaccaacaaaataaagttCCACAATATTCACATTCTCCATTATACAACCAACAATTATATGCGCAATTAGGTTTGCCCGCAACATCGGATCTATCAACGAGCAATGAGTATAATGAATATGAAATATTGCAAAATCACcaagaaacaaataatcatcagtATAATTCAATAACATTTCAACAACAACCTCAGCCACAATCACATACGTCTTACCAAACATCTAGTAAATTAATTGGAATAAATAGTTCACCGTCAACACTTTCAACAATCTCATCACCAGTTATACCTCATATTAATCAAGTGTCTGACTCTCCAATTAACAACCCAATGTTATATAATAGAACAAATGTAGAAGTAAGCCTAAAACAAAGCCATAAGGTGAATGAGAACAATAATAGTCAAGAATATACAAGTTTACATCCGCCTGCAATTAATTCAGCTAGATTAGATGCAATTTATAATCTATTGGAAAATAATCGTTTTTCCAATCCAACACATCCCACATCATGTTCAATGACGCAACAACAGCAGGaggagcagcagcagcagcaacaacaacagcaacagtcaATAAGTTCAAACATCCCATTGGTTAATGGATCTTCTTCGTCTACATATAATTCAATGAATCGTAATCATCATATAAATGAGTGTAGTGAAACAACAAATCATTTTTTGATTGATAACAGTAGCAGTAATAGCAATAGTaacagcagcagtagtagtagtagtaattGTAGTAGTAGTGTTGACAATAATATTAGTGATGTGGCTACTAAAATTCAAAGCATGTGTAATAATGAGAATGATGACGAGAATAATACtacaaataagaatttaaCGAAAGTTGttggtgataataataacaatactataataataaatggtgaAACAGAGACAACGGCCACATTGCCAATAGTAGGAACAGCAATAATATGCAACGAAAGGATATTGATTAGTCATAATGATTCATCGATTATTCTTCCtacaaatgtaaatataaataaaaatatgacatcatcattatcaacaacaacattagCAACAAaagtaacagcaacagcaacatcagTGCCAGTAATAGTAACAACAAAACCTATTGTAGAGAATAGTAGTTCTagcaataatgatgatgataatttatcTGGAAATActactaatttaaatattagttGTATTAGTAGTACTAGTAGTAAATCAAAtgatatttgtataaatattaataataataataatagtgatgATGAGAATGATAATGAAATCATTTGCGAATCAACAATGATGGCGACTGcgacagcaacagcaacaacgatGTCGTCATTAATGGCTGATGAAAATCTtagtgaaataattaaaaaaagtattgttGAAACAGTTTCTTCAGCATAG
- Protein Sequence
- MLKPFKTFLTYLQKNANSSSIFGISNTNTSEDVIIEDEVEIDSSELMTVENCDDPLTDPLALDDDDDCATDIININNNITNVEHSIISSTGITIRPTIPSLTDLDNSTDNDDNRIIIVDINKLKKGCIDEHNISDNNNTTAPSSETEPDDSFTSPSLVLEEETVERSDGSDSGLGSEISTSTILSTTVSDINSTISEDKPLRSNLKRHLESSDNVETKRQKRGITFEGVTVYYFSRIQGFTCVPSQGGCTLGMASHHMGFRTFTLSEYAAEQRRSHKHQLQELNPRSSSSEESDSDDEASENSGSEVDAESYAFLQAVSPRQRRALLKAAGIRKIDTSEKDDCRAIRSSREFCGCDCRDYCDPETCACSQAGIKCQVDRPSFPCGCTRDGCANVAGRVEFNPSRVRTHFIHTIMRLELEKKQRKSEEQISLNNYNVRQWSPHVRLPILDMETLNNCNYYNNQMVQVNHCNDLSSASSSQQYAADVPVVGHQQSYQLQMNNHMLSLGQRMNTNAVGQIGCINGNGDESLDLHYAYRDDYTTVDGLDAVTNTTPNTNYRSPQQLVLNEHYQQNKVPQYSHSPLYNQQLYAQLGLPATSDLSTSNEYNEYEILQNHQETNNHQYNSITFQQQPQPQSHTSYQTSSKLIGINSSPSTLSTISSPVIPHINQVSDSPINNPMLYNRTNVEVSLKQSHKVNENNNSQEYTSLHPPAINSARLDAIYNLLENNRFSNPTHPTSCSMTQQQQEEQQQQQQQQQQSISSNIPLVNGSSSSTYNSMNRNHHINECSETTNHFLIDNSSSNSNSNSSSSSSSNCSSSVDNNISDVATKIQSMCNNENDDENNTTNKNLTKVVGDNNNNTIIINGETETTATLPIVGTAIICNERILISHNDSSIILPTNVNINKNMTSSLSTTTLATKVTATATSVPVIVTTKPIVENSSSSNNDDDNLSGNTTNLNISCISSTSSKSNDICININNNNNSDDENDNEIICESTMMATATATATTMSSLMADENLSEIIKKSIVETVSSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -