Palb008674.1
Basic Information
- Insect
- Ptychoptera albimana
- Gene Symbol
- ttk
- Assembly
- GCA_961205885.1
- Location
- OY540804.1:12587053-12590047[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-17 7.5e-14 50.8 0.0 2 45 443 487 442 487 0.95
Sequence Information
- Coding Sequence
- ATGTCTGTGCAACAGTTTTGTTTGCGTTGGAATAATCACCAACCAAATTTTATATCCGTGTTTTCATCACTTTTACACAATGAAACATTAGTGGATGTAACACTAGCAGCTGAGGGAAGACAATTACAAGCACACAAAGTTGTACTTTCTGCCTGTAGTTCTTATTTTCAAgcaTTATTTACATCAAATCCATGTCAGCATCCAATTGTTATACTTAAAGATGTCCAATATAACGATTTAAAGACAATGGTTGATTTTATGTATTATGGTGAAGTTAATGTTTCGCAAGAACAATTACCACATATATTAAAGACAgcagaaatgttaaaaatcaaAGGACTGGCAGAAATGCCGGATGCTGCATCCCTAACGAAATCAGAAAGTAAATCATCTTCAGATCACACAGAGCCTCTACCTCAAGTTGGGGGAGGTGAATCAATATGGGGTAGTAGTGAATCTCAACAACAATTTCATATTCAGCAATCAAGAAGGACACCCTCACCTGGTACAATATCACCGTCTGCAAGACGAAAacgtttaagaaaatcttctactggTTCTGGCTCTGCTTCAACTGAACGTACATCAGAAGAACATGGCAGCATTGACGGAAATTCTGCTATTAACATAGCTCAAATAGACCCAATGACAACATTTAACTCTGGGAATGTAAATCAAAACTTAAGTAatataagaatattaaaaGCAAGCTCAAGTACTGATACTGAGCCTCCGCAACAAGATTCGTCCCAAGAAAGTATCGAAGATACAGCACATCCAGAACACAGTGACATGAAAACCGAAAGTGATTTAGGAAATATGTCGCATTCAATGCCAATTGAAATTACTGGATCATCGACATCAATTGAAGGAAATACATCTTCTGCTAGTTGTTCACAATCCCAGTCACAACATACAGGTGTGCAATGGACAGTTGTCGACTCAAATTATCCAAGATTTGCTTTATCATCGTGTCAAGCTAATTTAGGATTGCATCAAGGACAAAATAATCCAGAGAATCTtcaaagcagcagcaacaccAACTCAAATAATACACCAACAAATTCAAATTCTCAAACATCTGCAAATATACAAATGCCATATCAAAGTTCATCATATTCGCCACAAATAATATCAGTTAATCCAAATACTATTTCAAATAGTTATCCAACAAGTTTATCAACACCAACATCACCTCAAACAAGTGATTCCATTGCACAATCAGTATATAATCAAGCAACACCCAATCAATCACCTGTATCTGTAAATAACTCTGGAAATCAAACTGTTCCAGTAAAACGAAAACGTTCTGTTAATCCGCAAGGTGATGAGAATTTTTTACGAGCTCTTGATGCCGTTCGATTTGGTGGTATTGGTTTTTGTAAAGCTGCTCGTTTATATGGTGTTAATAATAGAACACTTTGGttagaatataaaaaacggGGTTACCCTATAAGTAggcaaagtattaaaaatagaataaaaacagAACCAAATATGTCACCACAGCCACCAACAACACCAACTCATGAAGAAAACACAATGGAAAATTATGATCATATGCAAACGTCTTCATTAAATATGACAGTGGGACCCTCGGAAACACCTACAGCACCACTTATGTGTCCTCCACATGCTCACCCCATAGGTGTTATGAGTTTTCTAGACTCTAGGCATTTAGAGTTTCCAACAAATAGTCATCAAATGTCTAGACAACGATATATAGATGGAAATGTAAACGTTAACCAGGCGGCGATGAATTTACAGggacttaattttaattcaatgtaa
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVFSSLLHNETLVDVTLAAEGRQLQAHKVVLSACSSYFQALFTSNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDAASLTKSESKSSSDHTEPLPQVGGGESIWGSSESQQQFHIQQSRRTPSPGTISPSARRKRLRKSSTGSGSASTERTSEEHGSIDGNSAINIAQIDPMTTFNSGNVNQNLSNIRILKASSSTDTEPPQQDSSQESIEDTAHPEHSDMKTESDLGNMSHSMPIEITGSSTSIEGNTSSASCSQSQSQHTGVQWTVVDSNYPRFALSSCQANLGLHQGQNNPENLQSSSNTNSNNTPTNSNSQTSANIQMPYQSSSYSPQIISVNPNTISNSYPTSLSTPTSPQTSDSIAQSVYNQATPNQSPVSVNNSGNQTVPVKRKRSVNPQGDENFLRALDAVRFGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRQSIKNRIKTEPNMSPQPPTTPTHEENTMENYDHMQTSSLNMTVGPSETPTAPLMCPPHAHPIGVMSFLDSRHLEFPTNSHQMSRQRYIDGNVNVNQAAMNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277040; iTF_01276887; iTF_01276344;
- 90% Identity
- iTF_01277040; iTF_01276887; iTF_01276344;
- 80% Identity
- iTF_01276344;