Palb003951.1
Basic Information
- Insect
- Ptychoptera albimana
- Gene Symbol
- kn
- Assembly
- GCA_961205885.1
- Location
- OY540802.1:22184649-22231257[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-234 3e-230 765.1 0.0 11 385 62 451 54 454 0.98 2 2 1.5e-10 2.2e-06 25.9 17.5 422 526 454 559 450 571 0.75
Sequence Information
- Coding Sequence
- ATGGTTCTGTCTGTGTTAACTTTACTCCCAGGACATTGCTCGGCATCACCATGGCCAACATTAGAGTTGGAGAATTGGGGAAGAAAATTATATCCTACAGCTGGACCCCGTGGTGCTGGTGGTTTAATGTTCGGTTTGCCACCGTCCGGTGGTGATCTTAATCAACCCCGGGGACCGATTACATCACTTAAAGAAGAACCATTGGGTGCCAGGGCATGGATGCAACCAGCGGATCAAACAAAcTTGGGAATTGGACGTGCACACTTTGAGAAGCAACCCCCTAGTAATTTACGAAAAtcaaatttctttcattttgtaattgCATTATATGATCGAGCTGGACAACCAATAGAAATCGAACGTACAGCgtttattggttttattgAAAAGGATCAGgaAGTTGACggtcaaaaaacaaacaatgggATCCAGTATCGTCTTCAACTTTTATATACGAATGgtGCACGACAGGAACAGGATATATTTGTTCGTTTAATAGATTCCGTTACAAAACAGgcAATTGTCTATGAAGGACAAGATAAGAATCCAGAAATGTGTCGTGTCCTTTTAACACATGAAGTAATGTGCAGccGTTGCTGTGACAAAAAAAGTTGCGGTAATCGAAATGAAACACCATCAGATCCTGTTATCATTGATCGaTTCTTTTTGAAATTCTTcttaaaatgtaatcaaaattgtttaaagaatGCTGGTAATCCGCGTGATATGCGACGATTCCAAGTGGTTATAGCAACACAAATCTCTGTTGATGGGCCCCTATTAGCAATATCGGATAATATGTTTGTACATAATAATTCAAAGCATGGAAGAAGGGCCAAACGTTTAGATACAACGGAAGGTACAGGCAACTCTCCATTGTCAATTTCGGGTCACCCACTAGCTCCAGACAGTACGTACGACGGCCTTTACCCTCCGTTACCTGTAGCAACACCGTGCATTAAAGCGATATCACCTAGTGAAGGTTGGACAACTGGTGGTGCCCAAGTAATAATTGTTGGTGATAATTTCTTTGATGGATTACAAGTGGTCTTTGGCACTATGCTTGTATGGAGTGAGttgATAACATCGCACGCGATTAGAGTGCAAACACCACCCCGACATATTCCGGGTGTTGTCGAAGTTACGCTTTcatataaaagtaaacaattttGTAAAGGTTCACCCGGacgttttgtttatgtttcattaagTGAGCCAACAATCGATTATGGTTTCCAGcgattacaaaaattaattccaagaCATCCCGGTGACCCCGAACGTTTACcaaaggaaattattttaaaaagagcTGCCGATTTAGCTGAAGCTTTATATTCAATGCCTAGATCACCGGGCGGCTCCACTGGCTTTAATAGTTATACGGGACAATTGGCTGTTAGCGTTCAGGATGGTAGTGCACAGTGGGCTGAAGATGAATACCAGCGGGCGCAAAGTAGTAGCGTTAGTCCACGCGGTGGTTATTGTAGTAGTGCATCGACACCGCACTCATCAGGCGGTGGCTCATACGGTGGTAGCGGTAATGGTTATGCACCAACACCGAACATGGGCACGTTACCATCATCTCCAGCTAGTGTATTCAATTCGACATCAATTAGTGCATTTGCACCGGTGACCTCAACAATGTCTGGATCcccaacatcaacaacaacagcatcagcaAATTTATGGCATCAAGCACTTGTAACACCTGCTCATACACATCCCAACCATCAtcaccaccatcatcatcatcaccagtCATGGCATAATAATCCTGCATCGGCAACAACAgccgtttag
- Protein Sequence
- MVLSVLTLLPGHCSASPWPTLELENWGRKLYPTAGPRGAGGLMFGLPPSGGDLNQPRGPITSLKEEPLGARAWMQPADQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDQEVDGQKTNNGIQYRLQLLYTNGARQEQDIFVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQISVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSPLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLSEPTIDYGFQRLQKLIPRHPGDPERLPKEIILKRAADLAEALYSMPRSPGGSTGFNSYTGQLAVSVQDGSAQWAEDEYQRAQSSSVSPRGGYCSSASTPHSSGGGSYGGSGNGYAPTPNMGTLPSSPASVFNSTSISAFAPVTSTMSGSPTSTTTASANLWHQALVTPAHTHPNHHHHHHHHHQSWHNNPASATTAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00251134;
- 90% Identity
- -
- 80% Identity
- -