Basic Information

Insect: Pterostichus niger
Gene Symbol: stc
Assembly: GCA_947425015.1
Location: OX380339.1:27847657-27852815[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1 5.3e+04 -4.4 2.6 15 19 488 492 487 496 0.57

2 16 7.1e-06 0.38 12.3 16.4 3 18 537 552 523 553 0.90

3 16 7.2e-09 0.00038 21.9 12.0 1 18 589 606 589 607 0.98

4 16 1 5.3e+04 -4.2 3.5 8 13 612 617 611 618 0.82

5 16 0.51 2.7e+04 -3.2 1.7 6 10 637 641 636 641 0.89

6 16 3.4e-11 1.8e-06 29.4 12.2 1 18 647 664 647 665 0.98

7 16 0.00011 6.1 8.5 12.3 4 19 713 728 706 728 0.88

8 16 1 5.3e+04 -4.9 3.7 1 10 737 746 737 746 0.82

9 16 0.77 4.1e+04 -3.7 2.0 5 10 757 762 757 762 0.93

10 16 0.0027 1.4e+02 4.1 9.1 1 11 768 778 768 790 0.91

11 16 6.3e-11 3.4e-06 28.5 12.5 1 19 795 813 795 813 0.98

12 16 1 5.3e+04 -4.9 13.0 8 19 858 870 849 870 0.71

13 16 0.15 7.9e+03 -1.5 1.4 8 13 875 880 874 881 0.84

14 16 1 5.3e+04 -5.4 2.7 9 13 888 892 888 900 0.54

15 16 3.5e-06 0.19 13.3 16.5 1 15 906 920 906 931 0.94

16 16 0.0094 5e+02 2.4 14.7 1 19 938 957 938 957 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1	5.3e+04	-4.4	2.6	15	19	488	492	487	496	0.57
2	16	7.1e-06	0.38	12.3	16.4	3	18	537	552	523	553	0.90
3	16	7.2e-09	0.00038	21.9	12.0	1	18	589	606	589	607	0.98
4	16	1	5.3e+04	-4.2	3.5	8	13	612	617	611	618	0.82
5	16	0.51	2.7e+04	-3.2	1.7	6	10	637	641	636	641	0.89
6	16	3.4e-11	1.8e-06	29.4	12.2	1	18	647	664	647	665	0.98
7	16	0.00011	6.1	8.5	12.3	4	19	713	728	706	728	0.88
8	16	1	5.3e+04	-4.9	3.7	1	10	737	746	737	746	0.82
9	16	0.77	4.1e+04	-3.7	2.0	5	10	757	762	757	762	0.93
10	16	0.0027	1.4e+02	4.1	9.1	1	11	768	778	768	790	0.91
11	16	6.3e-11	3.4e-06	28.5	12.5	1	19	795	813	795	813	0.98
12	16	1	5.3e+04	-4.9	13.0	8	19	858	870	849	870	0.71
13	16	0.15	7.9e+03	-1.5	1.4	8	13	875	880	874	881	0.84
14	16	1	5.3e+04	-5.4	2.7	9	13	888	892	888	900	0.54
15	16	3.5e-06	0.19	13.3	16.5	1	15	906	920	906	931	0.94
16	16	0.0094	5e+02	2.4	14.7	1	19	938	957	938	957	0.94

Sequence Information

Coding Sequence: ATGGCCCAGTGGAACCCATATTATGGTGTTCCAAACCAAACTGATTCTGTGTATGAAGAACAGAACATAAGTGCTCAGAATTATTACGGAATTCAGTCTTTACCATATGGTTCGGTACCCGTACAGCCAGTAAATTACAACGGATATTACGTTCCGAATAATATTTATTCGAACTTTGGAACAAATCTTCCTGCAACTGTTTATAATGTTCATGAACTAGAAGCACAACAGTTTGCTTCTTATAATCAAAATGCAAACACATCCAACTCTGGCACATCTGCAGAAACATCTAGTTCAAATAAACATATAAAACAAAATGTCAAAGAAGATGCTCGAGATAAAATAAGTACAGGGTCGAATGAAACTACTGCAAATTCAACATTGCATGCAACAGCAGCTGAATTTAAACCTAGTACATCTGCTAGCACAAACTCTCAAATAAGTAGTCAAACTTATTATCGAAATCAACCAAAAAATAAAGAGGATGTACGAAATAATAAAGGAGCTGTTCGTAAAAGTAATAAAGAACCGTCCCATGATTCAAAAAATACTAGAAACGGTTCTGAAGCACCAATAAACGAAGAAACTGGTAGAACAGTAAATAATAGACCCAATAACGATCCCCGTCAAGAAAATCGTAGATCTTACAATAGAAATAATTTAGGACAGAATTATAATAATAAATCTTATAATAGACCGGATCGTAATAATTATAGTAATAGGGGTTACAATAAAAGAGAAGATTATTCTAATAGTGAAGTAGAAAACAATCCACAACGTTTTACCGATCAAAATCATCCTAGACATGAAAATAGAAGCAGTAGATATGAAAATAAAGAAACAGAAAATAGAAGCAATAAGTACGAAAATAGAGAAAATAATTTCAGTAGAAATTTTAGAAGACCAGATTATAATCGTGATAGTAATGAAGCACAAAATGAACCTACACCAAGACCAACTAATTATCGGCAAAATCGCGACAATCGGGAAACAAATTACAGTAGAAATTATCGCGAGTATCCCGACAGAAACAACAGTGAACGTGGATCTTATACACGGGATAATTACAACAAATCTAATTCTAAGAATCCGTATCGAAACAGTAGATACGACAATAAAGGCTATGAGAATTGGCGCTCAGGACCAATTGAGCAGCAAGAAAAGAAAAATGAAACTGCAAGCCGGGAAAGAACAGAAAAAGATGATATTTCAAAAACTAGATCATATGATAGAGATAAAAAATCTTATCGGAATAATAAGCGATTTGAAAAAGATGATGATATATCTCAGCGAGATCGTTTAACAGATCAAGTGAATAAAGGAAATTTAGAATGTTTGGTATGCTGTGAAAGAGTTAGACAATCAGATAAAATATGGCACTGCCAAAAATGTTACCATATTTTTCATTTTCGCTGCATTATTAAATGGGGTAACAGTTCCAAAGATGAAAATGGTTGGCGCTGCCCCGCTTGTCAGCACGTCTGTAACGAAATACCTTCGGCTTGTTACTGTTACTGCGGTAAAGTAAATGATCCACCGTATAACCCAGGTGACACTGCGCACAGTTGTGGTGATGCTTGTGGTCGTTTAGGAGTAAAACCTGGTTGTGTTCATCGCTGCAACTTGCTTTGCCATCCTGGTCCGTGCCCCAAATGTGAGGCTTTAATGTCGAAATATTGTAATTGTGGTGCTACGACACAAATGGTTAAGTGTAGCGCTGAAACTGTGTTAGTTTGTACTGCTATCTGTAGTAAAGAACTTAATTGTGGGGTGCACACTTGTGAGAAGATTTGTCATGGTGGTGATTGCGAAGAATGCGTTGAAACCATTCATCAAGTATGTCATTGTGGAAAGTCCGAGAAGACAGTCCCTTGTAGTAAAGAGCAGAAAGAGATAAAATATTATAGTTGTGAACAAACTTGCGATAAACTTTTAAGCTGTGGTAATCACAAATGTAATGATATTTGTCATTCTGGTGATTGTCAACCTTGTGTAAGAGCTCCAGAACAAGTTAAAACTTGTCCATGTGGAAAGTCAAAGCTGGAAGTTATTCGGATTTCATGTTTGGAATCAATTCCTTGCTGCGATAAGATCTGTGGAAAACGATATCCGTTTTGTGGAACTCCATCAAATCCACATGTTTGTAAATCTCAATGTCATGAAGGCGACTGTTCTGCTTGTCCTCTAACAAGTTTTGTTCGATGTCGTTGCGGTCACATGAACTGTGAACTTACTTGCGCTGAACTTGTGTCAAGAACTGATGATGCTCGATGCGAGAAAAAATGCACAAAGAAACGATCTTGCGGTCGCCACAAATGCAATCTGCTCTGTTGCATCGACATTGATCATATTTGCCCTCTTCCTTGTAATCATATGCTAACTTGCGGATTACACCGTTGTGAACAAACTTGCCACAAGGGAAGATGTCAGCCCTGTTGGCGAATCAGTTTCGATGAACTGTACTGTGAGTGTGGTGCAGCTGTGATCTATCCTCCAGTTCCTTGTGGTACGAAAAGGCCGCATTGTATGAAACCCTGCACTAGGCAACATGACTGTCAACATGAACCGTTGCACACGTGTCACAGTCAACCTGATTGTCCACCTTGTACGGTTCTTACTACCAAAGTGTGCCATGGAGGACATGAGAAACGTTCGACGATTCCGTGCCATCAGCAAGAATTTTCCTGCGGTTTGCCATGCGGAAAAGAACTATCTTGTGGACGTCATAAATGTCAGTTACCATGTCATAAAGGGCGATGTTTGAGAGAAGGACAACACTGCACTCAATCATGTACAGTCGTGAGAGAAAGTTGCGGTCATTCGTGTGGATTACCCTGTCATGAACCTCCGTGTCTGGACTCTCCTTGTAAAGAATCTGTTAAAGTAACTTGTCAATGTGGACTGAGATCGTCGACAAGGACTTGTATGGACATGGCTGGAGAATATCAAAGAATTGCAACTTCTATGTTGGCTTCTAAAATGGCTGATATGCAACTAGGACATTCGATTGATATCGCCGATATAGTGGGAACCACTACGAGAAAAACTCTTAAAACTTTGGAATGTAATGATGAGTGCCGTTTAGTGGAGAGAAACCGTAGATTAGCTATTGGACTTCAAATTAGAAACCCAGATCTTAGTGCAAAATTAACACCCCGTTATTCTGATTTTATGCGGCAGTGGACAAAAAAAGATTCTGCTTTTTGCCAAATGGTACATGATAAACTGACAGAACTGGTTCAACTAGCTAAACAGTCTAAACAGAAATCCCGCAGTTTTTCATTCCCGTCAATGAATCGAGAAAAAAGACAATTCATCCACGAATATTGCGAACATTTCGGTTGTGAAAGTGCTGCATATGATCAAGAACCAAATCGTAATGTAGTTGCGACAGCTGCTAGAGATAAGGCTTGGTTGCCTAGTTGCAGTTTACTGGAACTGATTCAACGCGAAAGTGGACTGCGTAAAGTGCCTGGTCCAATTTTAAATCGTCCTTTAGGTGTTTCTAAAATATTAGACACTGTTTCTTTAAAAATACCAAGTAAATCTTCTGCATCTACCAGTGCAAATTCATCTACCTCATTCTCAAGCGCTCTACAGCAGCAGCAAACCAAATCGCCGGAAGATATAGACTATTTTAATTTTTCGTCTGGCAGTAAATAA
Protein Sequence: MAQWNPYYGVPNQTDSVYEEQNISAQNYYGIQSLPYGSVPVQPVNYNGYYVPNNIYSNFGTNLPATVYNVHELEAQQFASYNQNANTSNSGTSAETSSSNKHIKQNVKEDARDKISTGSNETTANSTLHATAAEFKPSTSASTNSQISSQTYYRNQPKNKEDVRNNKGAVRKSNKEPSHDSKNTRNGSEAPINEETGRTVNNRPNNDPRQENRRSYNRNNLGQNYNNKSYNRPDRNNYSNRGYNKREDYSNSEVENNPQRFTDQNHPRHENRSSRYENKETENRSNKYENRENNFSRNFRRPDYNRDSNEAQNEPTPRPTNYRQNRDNRETNYSRNYREYPDRNNSERGSYTRDNYNKSNSKNPYRNSRYDNKGYENWRSGPIEQQEKKNETASRERTEKDDISKTRSYDRDKKSYRNNKRFEKDDDISQRDRLTDQVNKGNLECLVCCERVRQSDKIWHCQKCYHIFHFRCIIKWGNSSKDENGWRCPACQHVCNEIPSACYCYCGKVNDPPYNPGDTAHSCGDACGRLGVKPGCVHRCNLLCHPGPCPKCEALMSKYCNCGATTQMVKCSAETVLVCTAICSKELNCGVHTCEKICHGGDCEECVETIHQVCHCGKSEKTVPCSKEQKEIKYYSCEQTCDKLLSCGNHKCNDICHSGDCQPCVRAPEQVKTCPCGKSKLEVIRISCLESIPCCDKICGKRYPFCGTPSNPHVCKSQCHEGDCSACPLTSFVRCRCGHMNCELTCAELVSRTDDARCEKKCTKKRSCGRHKCNLLCCIDIDHICPLPCNHMLTCGLHRCEQTCHKGRCQPCWRISFDELYCECGAAVIYPPVPCGTKRPHCMKPCTRQHDCQHEPLHTCHSQPDCPPCTVLTTKVCHGGHEKRSTIPCHQQEFSCGLPCGKELSCGRHKCQLPCHKGRCLREGQHCTQSCTVVRESCGHSCGLPCHEPPCLDSPCKESVKVTCQCGLRSSTRTCMDMAGEYQRIATSMLASKMADMQLGHSIDIADIVGTTTRKTLKTLECNDECRLVERNRRLAIGLQIRNPDLSAKLTPRYSDFMRQWTKKDSAFCQMVHDKLTELVQLAKQSKQKSRSFSFPSMNREKRQFIHEYCEHFGCESAAYDQEPNRNVVATAARDKAWLPSCSLLELIQRESGLRKVPGPILNRPLGVSKILDTVSLKIPSKSSASTSANSSTSFSSALQQQQTKSPEDIDYFNFSSGSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01226297;
90% Identity: -
80% Identity: -