Pnig014417.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- pnr
- Assembly
- GCA_947425015.1
- Location
- OX380338.1:3926373-3928681[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4 2.1e+04 -3.3 0.2 7 18 234 245 234 247 0.75 2 2 2.4e-17 2.1e-13 51.1 3.1 1 35 268 301 268 302 0.98
Sequence Information
- Coding Sequence
- ATGAACACAAACATAATTTTAAGTCTTACTGACAGAATACATCTGTTTAAGGAACAGTTAAAGCTCTCTATGATGGCTTTATCTTCCATGATACCTTCCACCGGATTTCTGGTGCGCGCGCCTTCTCCTGGTGTCCCCGACGACGACTTCGATGAACCTGCCGACCTATCCAAGCGCACAGAAGCTGAATCCGTTACCTGCGTTCCTGAGATCCACCACATGGAGCTAAAACAAGAGGTGGAAGACCCCGAAGACGAGCCGGACATGGGACACCACGGGAATGAGCACCGGATTGAACCAGAAGCAATGATGCTGGACGTGAAAGCGGAGGATTGTAAAAGTGAGTGCAGCAGTGGTACTGACCCTGAAAGACTGGAGGTTGATGTAGATGCAGGAGACATGGATTTATCTCCTACGGCGGAAGCGACAGGTAACGCCGAAGAAGCGGAGCTATGGAAAGCGCTAGGACCTGCAAAGAATGGACACAGTGATTTGCTGAGGAAGCTTATCACATGTAGAAGGAAATTAGGTGTGAGTATAGTTCCCGGTCTAGCTTCTAGTCCGCCACAACCACAACCATCGTTATCACCTGGTTTAAGCAGCACATCCTTCATCATCACCACAGACTCGGGGTCGAAGGCTCGGCGCAAACAGTCGTTCCCTAGTCGCGCACCACACGACAACACGCCCTCGCCTCCTACAGCTACCGACCCCTGGCATCACCAGCAGCACAAATCCACGCCGTCTCCAGCAGCTGTTTCAGTTCCAGGCACAACAACACCAAAACGCATTGACCTAGCATGCAGCAACTGCGGGACAATGACGACAACAATCTGGCGACGAAACGTGCGTGGTGAAATGGTCTGCAACGCCTGCGGACTGTACTTCAAGCTGCACGGTGTCAACCGACCCCACACCATGCGGCGGGACACTATCCACACGCGGCGACGGCGACCTAGAGGTCGCGGAGGTGGGGGCTCTGGCGGTGGAGGCGTCAGCAAGGCGGGTTGTGAAGAAGACATGCTCATTGCGCTCCGGAAACACATTCAGCCGCAGCTGATGCTAGCAGCGATACAAGCGAATCATTGTAGAGTTAGTGAGGATAACTCGGACTCGGATAGTGAGCTACCGCAGCCGTTGAATTTGGTGGCAGGGCAAGATGGCGCCAGGCGATAA
- Protein Sequence
- MNTNIILSLTDRIHLFKEQLKLSMMALSSMIPSTGFLVRAPSPGVPDDDFDEPADLSKRTEAESVTCVPEIHHMELKQEVEDPEDEPDMGHHGNEHRIEPEAMMLDVKAEDCKSECSSGTDPERLEVDVDAGDMDLSPTAEATGNAEEAELWKALGPAKNGHSDLLRKLITCRRKLGVSIVPGLASSPPQPQPSLSPGLSSTSFIITTDSGSKARRKQSFPSRAPHDNTPSPPTATDPWHHQQHKSTPSPAAVSVPGTTTPKRIDLACSNCGTMTTTIWRRNVRGEMVCNACGLYFKLHGVNRPHTMRRDTIHTRRRRPRGRGGGGSGGGGVSKAGCEEDMLIALRKHIQPQLMLAAIQANHCRVSEDNSDSDSELPQPLNLVAGQDGARR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01226291;
- 90% Identity
- -
- 80% Identity
- -