Pnig029994.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- pnr
- Assembly
- GCA_947425015.1
- Location
- OX380345.1:24016945-24026325[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.36 3.2e+03 -0.7 0.0 9 18 60 69 58 71 0.86 2 3 2.8e-18 2.5e-14 54.1 3.2 1 34 133 165 133 167 0.97 3 3 2e-19 1.8e-15 57.8 5.8 1 35 187 220 187 221 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACTCCTCGCCAGCAACTAGCTACCCTGACACCAGCTACCCGCAACACCTCCATCAGCAACCCCCGGTATACGTGCCGTCCAGCCGAGCCGTGGGAGCAGTCGCCGTCCCAGGACAATATCCTGGAGGAGGCGGCGGCGGCAGCCACTTTGCAACCGCTCCACCTCAGGCCACAGCCACGTGGCACGCCGACCCTACAGGGTATGTCGGTGGCGGAGCACATAGTCTAGCGGGGGTGGCTGGGAATCCACATCATGGTGCACTAAGTGCTGGACAGTTTTACGCGCAGAATATGATGATGAGTGGGTGGAGAGCTTATGATGGAAGTGGGTTTCAGAGGACGTCGCCGTATGATAGCGCAATGGACTTCCAATTCGGCGAAGGTCGTGAATGTGTAAATTGTGGCGCGATCTCGACGCCATTGTGGCGTCGCGACGGCACCGGCCACTATCTCTGTAATGCCTGCGGCCTCTACCACAAGATGAATGGCATGAACCGACCTCTCATCAAACCGTCCAAAAGACTGACCGCAACAAGACGGCTGGGTCTCTGTTGCACAAACTGCGGTACGCGTACAACCACCCTCTGGCGACGGAACAACGACGGCGAGCCTGTCTGCAACGCCTGCGGCCTCTACTTCAAACTCCACGGTGTGAACCGACCTTTAGCAATGCGTAAGGACGGCATTCAAACAAGAAAACGAAAACCTAAGAAGCCGTCTGGCAGCGGCAGCAGTAACGGGGAAAGAGAAGAACATAGCTCCGCCCCCAGTGATGATACCAAATCCACTTCAGTTCATCACACCCAGTCAAATCAAGGCCACCAACATTCGTCATCCTCAAATGTGGAGAGCACACCTAAGCAATCATCATCAGAGAGGCCTTACCTAGGACAGACGTCACTCATACCATCTACATCATCATCATCGACGTCTTCTTCAGGGATTAAAAGTGAGCCAGGGTACGAGTCCATGGCAACTTCGCAGTATAATTGTTTACAAGCTCACCAAGGATACTCCGCCTACCATCAGCAGATGTTCGGATTCTCCGGAGGTCCTCCCAGCGGCGCTGAAGTCGCGTATCATCATCAGCATCATGTGACAGCTGCTGCGAAATTAATGGCGTCGTCGTAG
- Protein Sequence
- MFHSSPATSYPDTSYPQHLHQQPPVYVPSSRAVGAVAVPGQYPGGGGGGSHFATAPPQATATWHADPTGYVGGGAHSLAGVAGNPHHGALSAGQFYAQNMMMSGWRAYDGSGFQRTSPYDSAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPSGSGSSNGEREEHSSAPSDDTKSTSVHHTQSNQGHQHSSSSNVESTPKQSSSERPYLGQTSLIPSTSSSSTSSSGIKSEPGYESMATSQYNCLQAHQGYSAYHQQMFGFSGGPPSGAEVAYHHQHHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01105245;
- 90% Identity
- -
- 80% Identity
- -