Basic Information

Insect: Pterostichus niger
Gene Symbol: Znf784_1
Assembly: GCA_947425015.1
Location: OX380339.1:3859115-3865672[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.035 5 9.3 2.9 2 23 571 592 570 592 0.96

2 28 3.2e-06 0.00045 22.0 0.5 1 23 595 617 595 617 0.98

3 28 0.18 25 7.1 1.9 1 23 627 649 627 649 0.98

4 28 0.00068 0.096 14.7 1.6 2 23 656 678 655 678 0.96

5 28 0.69 98 5.2 1.6 3 23 683 702 681 702 0.94

6 28 0.00037 0.052 15.5 2.9 1 23 708 730 708 730 0.98

7 28 2.8 4e+02 3.3 0.3 2 23 737 757 736 757 0.90

8 28 2.6e-06 0.00037 22.3 2.1 2 23 764 785 763 785 0.97

9 28 0.078 11 8.2 1.4 1 23 791 814 791 814 0.95

10 28 4.4e-05 0.0063 18.4 2.2 1 23 830 852 830 852 0.99

11 28 0.0022 0.31 13.1 1.0 1 23 858 880 858 880 0.98

12 28 6.6e-06 0.00093 21.0 2.7 1 23 888 910 888 910 0.99

13 28 2e-05 0.0028 19.5 0.1 1 23 916 938 916 938 0.98

14 28 4.8 6.7e+02 2.6 1.0 1 23 1199 1222 1199 1222 0.91

15 28 2.4 3.4e+02 3.5 1.4 1 21 1369 1389 1369 1392 0.87

16 28 0.24 33 6.7 1.9 1 23 1452 1475 1452 1475 0.95

17 28 0.0015 0.22 13.6 0.8 1 23 1576 1598 1576 1598 0.98

18 28 0.00056 0.079 15.0 3.6 1 23 1608 1630 1608 1630 0.98

19 28 0.00013 0.019 16.9 0.5 2 23 1637 1658 1636 1658 0.96

20 28 0.00065 0.091 14.7 0.2 2 23 1662 1682 1662 1682 0.97

21 28 5.2e-06 0.00073 21.3 2.9 1 23 1688 1710 1688 1710 0.98

22 28 0.0012 0.17 13.9 0.1 2 23 1718 1738 1717 1738 0.96

23 28 2.7e-07 3.8e-05 25.4 2.5 2 23 1745 1766 1745 1766 0.97

24 28 0.23 33 6.7 0.0 3 23 1774 1795 1773 1795 0.95

25 28 1.2e-05 0.0016 20.2 1.6 1 23 1809 1831 1809 1831 0.97

26 28 0.0026 0.37 12.9 3.5 2 23 1838 1859 1837 1859 0.91

27 28 6.2e-07 8.7e-05 24.3 5.6 1 23 1867 1889 1867 1889 0.99

28 28 8.9e-05 0.013 17.5 0.1 1 23 1895 1917 1895 1917 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.035	5	9.3	2.9	2	23	571	592	570	592	0.96
2	28	3.2e-06	0.00045	22.0	0.5	1	23	595	617	595	617	0.98
3	28	0.18	25	7.1	1.9	1	23	627	649	627	649	0.98
4	28	0.00068	0.096	14.7	1.6	2	23	656	678	655	678	0.96
5	28	0.69	98	5.2	1.6	3	23	683	702	681	702	0.94
6	28	0.00037	0.052	15.5	2.9	1	23	708	730	708	730	0.98
7	28	2.8	4e+02	3.3	0.3	2	23	737	757	736	757	0.90
8	28	2.6e-06	0.00037	22.3	2.1	2	23	764	785	763	785	0.97
9	28	0.078	11	8.2	1.4	1	23	791	814	791	814	0.95
10	28	4.4e-05	0.0063	18.4	2.2	1	23	830	852	830	852	0.99
11	28	0.0022	0.31	13.1	1.0	1	23	858	880	858	880	0.98
12	28	6.6e-06	0.00093	21.0	2.7	1	23	888	910	888	910	0.99
13	28	2e-05	0.0028	19.5	0.1	1	23	916	938	916	938	0.98
14	28	4.8	6.7e+02	2.6	1.0	1	23	1199	1222	1199	1222	0.91
15	28	2.4	3.4e+02	3.5	1.4	1	21	1369	1389	1369	1392	0.87
16	28	0.24	33	6.7	1.9	1	23	1452	1475	1452	1475	0.95
17	28	0.0015	0.22	13.6	0.8	1	23	1576	1598	1576	1598	0.98
18	28	0.00056	0.079	15.0	3.6	1	23	1608	1630	1608	1630	0.98
19	28	0.00013	0.019	16.9	0.5	2	23	1637	1658	1636	1658	0.96
20	28	0.00065	0.091	14.7	0.2	2	23	1662	1682	1662	1682	0.97
21	28	5.2e-06	0.00073	21.3	2.9	1	23	1688	1710	1688	1710	0.98
22	28	0.0012	0.17	13.9	0.1	2	23	1718	1738	1717	1738	0.96
23	28	2.7e-07	3.8e-05	25.4	2.5	2	23	1745	1766	1745	1766	0.97
24	28	0.23	33	6.7	0.0	3	23	1774	1795	1773	1795	0.95
25	28	1.2e-05	0.0016	20.2	1.6	1	23	1809	1831	1809	1831	0.97
26	28	0.0026	0.37	12.9	3.5	2	23	1838	1859	1837	1859	0.91
27	28	6.2e-07	8.7e-05	24.3	5.6	1	23	1867	1889	1867	1889	0.99
28	28	8.9e-05	0.013	17.5	0.1	1	23	1895	1917	1895	1917	0.98

Sequence Information

Coding Sequence: ATGTTATGTGCTGAGCATTTTGAGGACAAATACTTCGACAGAAAAGTATTTAAAGAAAACGTCGAACCTATTCCTACAATATTTCGCACTGATCATAAAGAAACACAAATGTCTGGACGACAGGATGATTCGTTGCTATCACGGTTGTTGTTATCAAACATTAACACACCTTTAGAATTCGGAAATCTTGGTAGTTACTCGGATCATATTCTGGACAAAAATGTTCGTACATCAAACAACACAAAGAAAAGTGATCCTAACAGCAATAATATTTCAATAGAGTTTGATTATTGCAGATTATGTGCGAGACTATTTCAAGATAACACTTTATATTCTATATATGGAGCAACTAATTACAGGGAATTATTAGAAATGTGTTTACCTGGCAAGTTCTCAGAAACTGATGATCTTTCCCATAAAATTTGCAATTCTTGTATATGCAAATTAGAAAATTGTTGCACAATTTTAAAATCATTCCTCGAAGCAGACAAGAAACTCAGGAATATTTCCAAGCCTTCAACATCACTTCAAAATGTTAATTTTTCCAATCCATCCGAAGAAATAATAGACATTTTAAATATGCCGGAAAGAAAAATAATTCAATTTCAGTGCATAATGTGTCCTTCTATTTTTAACAGTAAAGAAGAAATTATTGTTCATGCATTTCATTCCCATCCCACGTCAAGAGGAAATAAAATTATTTCAAATATATTTCAAACTAAAGCTGTAAGTAATTATGATACAGATCCAAATCAAATTAAACAAAACTCAACCAAAACATTCCAATGTATCATATGCATGGATATATTTAGTACCAAAGAGGCTGTAATAGCTCATACTCAAACTGAGCATAAAATTTTGGATCAAGAAAAAACTAAATTAATTGTTAAATACATGTGTGTTTCTTGCCCAACAATTTATGATAGCGAGGAGGTTGTAATTGAACATGCTTTATTAAAACATCCTCAAAATAAAATTGTATCTAAAACTTTTCTATTAAAAAGAAACGATTTCGTTAATAAAAATGAAATAACTACCGAAGTTAGTAATACACAAAAAGTATATCAACCTTCTGTTAATGTTAATAATATTGATAAAAATCGGCGACGTTCAAAGAAGGAAAATTTAAAATATACAGAAATATTTCAAATAAAATATCGATGTCAGAGTTGTTTTATTTTATTTAACAGTTATAAAAATGTTCTTGAACATTCAGAACTTTTTCATCCGACTTTAAAAGAATCAGGTTTAGTCGCATTATTAGTTAAAGTTAGGATACCGACAAATTCTATAACTAATGACGAGCAAAATAAAGAGAATAATTCAGTAGATAATCAAATAATTTGTGTTGATGATGGTACAATAATCGAAATAGATCCGAACATAATACCAGAACGACGAAAAATAATAACGGAAAATAGATATAAATGTATGAAGTGCTCTAATTTATTGGCAAATAAAAAAAAGATGCTTCAGCATTCATTAAGTTTTCATCTAACTGATTTAACTTCTGGTTCCAACGAAATTAAGTGTAAAATAGTTAAAGTTAAAAGAGAATGCAATTCTAAAGAAATATATGAATGTTTAATTTGTAGTACACATCATATTTCGAAACGCAGTTTAATTTATCACACGCGTCTCTTACATCCTTTGATATGTAACGACAAATTTTTATGCCGACATATAACACCAAAAAATATACAATCCAAACAATGTTTACGGTGTAATGCAGTATTTGCAAGCAGTACTTCCTATCGCAAACATATGTACCATCATATTAAATATATTTGCGAAGAATGCGGATCGAAATTTAATCAATTGAGCAATTTGAAAGCTCATTTAAAGACGCATGAACAACCGGAAATAATCATAGAGACTTATAAATGTGTTACATGTGAGGAAACATTTTTAAGCAAAATACAATTACACACACATGAAAAAATACATAAAGTTCCTCACGATGTTTCTTGTTCAAAGTGTAATAAATTATTTACTTCAGAATTTGAATTGAAAAAGCACGAAAGAAAAATTCACACCCCATGTTTATGCGACATATGTGGAAAGACATACGAAATTAATTACATTAGAAATCATTTAAAAACTCATAATACTAATAAACCATACAAATGCAAACTTTGCACTAAATCATTTAAAACAGGTGGTGCATTGAGCAAACATAAAAGATTCCACTTTCCAAACAGACATATTATGTGTCAAGTCTGCGGTAAATTAATTGTACGTACATCGTTATATCAACACATGAAACTTCATACAGATGAAAAGCCATGGGTTTGTGAAATTTGCGGAGAGAATTTCCGTCGTAAAGATCATTTACGAAATCATAAAAAGACACATATGAAAGACACAATCTATCCATGCAATATTTGCAATATTGATTTATTCAGTAAATCATCGTACAAAAATCATGTAGCTTCTTGTCATACAGAATCAAAAGAATACTCTCTTCTTAACAAATCGGAGAAAGGCTACACCTGTGAAATTTGTAAGAAAGAGTTTAAATATAAAATCAATTATGAAGATCATTACCGAATGCACTCTGGACAAAGAATTTATTCATGCAATGTTTGTGACAAAACATTTGGAACTAAAATTATTCTTTTGCAACATAAGAAGACACATTTAGACTACGATCAGTTGCCTTATCAATGTGAAATTTGTAAAAAGAAGTTTCAACGGACAGAGAATCTACGAAATCATCGAAGAGTTCATACTGGGGAGAAACCGTTTCCTTGTCCGATTTGTCAGAGACCTTTTAGGGTTCGTGGAGAAATGGTTAAACATATGCGGATTCACATACGAAAGGATGAAAGAAAGATTCAGAAACTCTCTTCTGAAATAGTCAGTGACACTGATAACAGCACGGAAAATATATTTTCTCGACTTGATAGCAATTCGCGTCAAGAAATTCTAAGCATTACTCAAAGTTCACAGGATTACTGTAGATTATGTGCAGAACTATCACAAACTGATATTTTGGTTCCAATATTTGACAACGATCGTACCAGATATGAGCACATGCTAGAACTGTGTTTACCAGGAAAGTTCAAAGAGCACGATATATATCCACGAATGATTTGTATATCATGTATAAAGAAACTAGAGGAGTGTTATAAAATATTAATATCATTTATGCGTGCAGACAACATTATTAGAAAAATATTTAATAAAGAACTTAAATCTTGTCTTAATATAAGAATAAAGAATTCGACTTATAAACAAGGAGCAGATGAAAAATCGGCAGATAGTTCGGTAATTAAAATACGTTCAGATTTACACCGTGAAAATCCAGTATCAGTATACGCTACGAAAAAGATAAAATTAGAGGAAATTGAAGATCCACTATCCTTACACGATGATCAAAAAAAAGAAGAGGACCCATTGTCCTTAAAGATTGGCCAAAATAAAGAAGAAGATCCATTATCTTTAAATATTGTCCCAAAGATTGAATATGAAGATCCACTTTTTATTATCAATAATAATGACTCGGTTGTTGAAAATTCGACAATTCAACAACCTGAATTTTTTCAAGTACATAAAAATAAAACCACTGAACAAGAAAAACTTGAAATTAAGTATCAATGTTTAAGATGCTTAAAATTATATAATAACAAAAAAGATGTCACTGATCATTCGCTTTTATCTCATCCATGTAAAGAAAATAATGAAAAGGTTTTTCGAGTAGTTATGGCAAAATTAAGGAAAAAGATAAGTACTGAAACAGTAAGTATCAAAAATAAAGATGTAAATACTAAAACAGTAAGTAACGAAAAATTCACAACAAAAGAAATATTTGAATATAAATATCAATGTATAAAATGTTATCAATTATTTATTAATAAGCTACAATTTCATATACATTCGGCAGAGAAACATTCAACTCTAAATCGTAAAATTGTTTGCAAATTAGTTAAAGTTAAAAAGGCAATAATAAACAATGAAGTCAAGCTGGATGAAGAACACCCTATGTTTGTAAAATATGAAAATTTGATAAGCCCTTTTTATCAGCAAACAAAAAAAAGAATGCTTAATATACCCGAAAATAATGAGACAACATCGGAACCCATAGAAACATATCGAATTAAATACCAGTGTAAAGGTTGCTCTCTTTTATTTAACACTTATAAAGACGTTCTTGATCATTCTGAACATTTGCATCCAATATTGAAAGAATCTGGTGCAGTTGCATCAGTAGTTAAAGTTAAAGATACTGATGATAAAGAAATTAATCTAATTATTAGCATTAATGACGGTACAATAATTGAATTAAATCCGAATGTGAAACAAACACGAAAATTTAGATGCTCGCAACAAAAAATAAAAAGTGAAATTAGATTTAAATGTTTGAAATGTAATAAACTATTCCAAACTAAAAAATTGATTCTTCAACATTCGTTAACCATACATGCAATGAAACTAACGCATGGCTGGAACGAAATTAATTGTAAAATGGTTACAGTTAAGAGGGAAATGAATTATCGTCCTAAAATAAGAACGACATACGAATGTTTAATTTGTTGTTCGAATCATGTTACGAAAAGTGGTTTGATTCAACATACACGCGTATTCCATCCATCGGTAAGTCAAAACAAATTTTTATGCCGATATGTAGATCCAAAAAATAAACAATTCAAAGAATGTTTACATTGCAATGAAATCTTGAAAAGTTATTCTCGATATCGTGAACATCTGCCTAAACATGCTGTATTCATTTGCGAGAAATGTGGAACGAATCTGAATTCACTCAGCCAGTTCCGAATTCATTTAAAGTCACACGAAGAACTGAAACCAGTCAAAACTACTTATACATGTCATGTATGTGAGACAAAATTTACAAGTAATTTACAATTAAGAAAACATAAACTAATACACAATATACCTAAAGAAGTTTCTTGTTCGAAATGTAATAAACCATTTACGACAGAAATTGAATTAAAAAAACATGAACAAATACACGACACACGTGTATGCGATGTTTGTGGAAAGACATTCGATGCTAAATACATACAAAAACATATTCAAACTCATAACATCGGTACTCCGTACAAATGCAAATCCTGTCCGAAAACATTTAAAACGCAACATATGCTCTGGGCCCATCAGAGAGCTCATCTTCAAGTACCAAGTTGCATAATGTGTCAGATCTGCGGCAAAGTCATTCGAAAGGCATATTTAACTCTTCACATGCGGATTCACAATGGGCTTAAACCGGAGGTTTGCGACATTTGCGGATTGAGTTTCCGCCGGAAAGATCATTTACGAAATCATATGAAAACACACATGGAAGACCGAAGTAATCCATGCCCTATTTGCAACATACCCCTGTACACTAATCAGTCTTATTGGAGTCATCTGTCTATTATGCATGGCGGAAAAAAACCAGTTCCCAATCATTCAGAACGTCCTTTTGCATGTGTTATATGCGAGAAAACATTTTCACAAAAATCTTACTTGCAAGATCACTTCCGAAAACATACAGGAGAAAAAATCTGTTCCTGTAGAATTTGCGGAAAAACGTTTGCAAGTAGGATTCACCTTTGGCAACATAAGTTTGCTCATATGGATTATGATCAGTTGCCGTATAAATGCGAATATTGCGATAAGAAATTTAAACGATCGGAACATCTTAGGAATCATCGAAGAATTCATACGGGCGAAAAACCGTTTCCTTGCCCGATTTGTCAAAGACCATTTAGAGTTCGGGCTGAGATGATTAAACATACCAGGATTCATAAGCAAAAGGATGAAAGAGAAATAAGAACAAAATCCACGAAATCTACTAAAATAACGGTTGAGAAGATTGAAGATATTTTATCTGTAGATGATAGTAATTCATGCGTGAATTAA
Protein Sequence: MLCAEHFEDKYFDRKVFKENVEPIPTIFRTDHKETQMSGRQDDSLLSRLLLSNINTPLEFGNLGSYSDHILDKNVRTSNNTKKSDPNSNNISIEFDYCRLCARLFQDNTLYSIYGATNYRELLEMCLPGKFSETDDLSHKICNSCICKLENCCTILKSFLEADKKLRNISKPSTSLQNVNFSNPSEEIIDILNMPERKIIQFQCIMCPSIFNSKEEIIVHAFHSHPTSRGNKIISNIFQTKAVSNYDTDPNQIKQNSTKTFQCIICMDIFSTKEAVIAHTQTEHKILDQEKTKLIVKYMCVSCPTIYDSEEVVIEHALLKHPQNKIVSKTFLLKRNDFVNKNEITTEVSNTQKVYQPSVNVNNIDKNRRRSKKENLKYTEIFQIKYRCQSCFILFNSYKNVLEHSELFHPTLKESGLVALLVKVRIPTNSITNDEQNKENNSVDNQIICVDDGTIIEIDPNIIPERRKIITENRYKCMKCSNLLANKKKMLQHSLSFHLTDLTSGSNEIKCKIVKVKRECNSKEIYECLICSTHHISKRSLIYHTRLLHPLICNDKFLCRHITPKNIQSKQCLRCNAVFASSTSYRKHMYHHIKYICEECGSKFNQLSNLKAHLKTHEQPEIIIETYKCVTCEETFLSKIQLHTHEKIHKVPHDVSCSKCNKLFTSEFELKKHERKIHTPCLCDICGKTYEINYIRNHLKTHNTNKPYKCKLCTKSFKTGGALSKHKRFHFPNRHIMCQVCGKLIVRTSLYQHMKLHTDEKPWVCEICGENFRRKDHLRNHKKTHMKDTIYPCNICNIDLFSKSSYKNHVASCHTESKEYSLLNKSEKGYTCEICKKEFKYKINYEDHYRMHSGQRIYSCNVCDKTFGTKIILLQHKKTHLDYDQLPYQCEICKKKFQRTENLRNHRRVHTGEKPFPCPICQRPFRVRGEMVKHMRIHIRKDERKIQKLSSEIVSDTDNSTENIFSRLDSNSRQEILSITQSSQDYCRLCAELSQTDILVPIFDNDRTRYEHMLELCLPGKFKEHDIYPRMICISCIKKLEECYKILISFMRADNIIRKIFNKELKSCLNIRIKNSTYKQGADEKSADSSVIKIRSDLHRENPVSVYATKKIKLEEIEDPLSLHDDQKKEEDPLSLKIGQNKEEDPLSLNIVPKIEYEDPLFIINNNDSVVENSTIQQPEFFQVHKNKTTEQEKLEIKYQCLRCLKLYNNKKDVTDHSLLSHPCKENNEKVFRVVMAKLRKKISTETVSIKNKDVNTKTVSNEKFTTKEIFEYKYQCIKCYQLFINKLQFHIHSAEKHSTLNRKIVCKLVKVKKAIINNEVKLDEEHPMFVKYENLISPFYQQTKKRMLNIPENNETTSEPIETYRIKYQCKGCSLLFNTYKDVLDHSEHLHPILKESGAVASVVKVKDTDDKEINLIISINDGTIIELNPNVKQTRKFRCSQQKIKSEIRFKCLKCNKLFQTKKLILQHSLTIHAMKLTHGWNEINCKMVTVKREMNYRPKIRTTYECLICCSNHVTKSGLIQHTRVFHPSVSQNKFLCRYVDPKNKQFKECLHCNEILKSYSRYREHLPKHAVFICEKCGTNLNSLSQFRIHLKSHEELKPVKTTYTCHVCETKFTSNLQLRKHKLIHNIPKEVSCSKCNKPFTTEIELKKHEQIHDTRVCDVCGKTFDAKYIQKHIQTHNIGTPYKCKSCPKTFKTQHMLWAHQRAHLQVPSCIMCQICGKVIRKAYLTLHMRIHNGLKPEVCDICGLSFRRKDHLRNHMKTHMEDRSNPCPICNIPLYTNQSYWSHLSIMHGGKKPVPNHSERPFACVICEKTFSQKSYLQDHFRKHTGEKICSCRICGKTFASRIHLWQHKFAHMDYDQLPYKCEYCDKKFKRSEHLRNHRRIHTGEKPFPCPICQRPFRVRAEMIKHTRIHKQKDEREIRTKSTKSTKITVEKIEDILSVDDSNSCVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -