Pnig036376.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- -
- Assembly
- GCA_947425015.1
- Location
- OX380337.1:40743965-40745905[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.93 2e+03 0.5 0.0 1 19 8 26 8 31 0.89 2 5 0.13 2.8e+02 3.3 0.1 31 44 52 66 46 68 0.84 3 5 0.001 2.1 10.0 0.3 3 46 113 172 111 172 0.69 4 5 0.0029 6.2 8.5 0.2 3 42 240 293 238 297 0.63 5 5 0.0025 5.2 8.8 0.6 4 45 399 451 396 452 0.90
Sequence Information
- Coding Sequence
- ATGCAATCAGAGGCTTCTTGTAAGGATCCTTGGCAAAAATCAGATACTCTTCATTTAATTAAATTAATAAGTGAATTTAAATCATCTAGTGACAGTGACAAAGTAAATAATAACGAGTTGTATATACAAGCTGCTAATAAACTATTTGAATATGGCATTTCCCGTACTTATATCCAATGTAAAAGTAAATGGAAAGAATTAGTAGATTCTTACAATGAATACAAGAAAACACAAACAGGAGATCCACCACCATATTATACTGAACTTGATAACATGTTATCAGAAGCATTTAGCGAATATGACTCCGCGAGTGAAGGAATAAACCCTTTCGGGACTCCTTGGACCCAATACGAAACAACAACACTTATCAGAGTTATGAAAGTTGGTAATTTTATCAACAAATTAAAACATGAAGAACCTTTAAACGTTTATGAACAAATAGCTCAGTACATGCAGAAAGTGGGCCCCATTACAAGAAACAAAGAAGATATCCAACAACGATGGAGGAATTTGAAACAGTCTTACATAAAATACATTAAAGGAGATTTATTACATTTTAAATATTTTGAACTAATGGATGCACTTCTAGATTGGGAACCTAATTCAATTGCATTTGAAGAAGACCAATTCAAAGATGGCCATGAATACGGTGATGAATCGTACCAAAATCCAGATGACTACGAAATCAAAGGAGCCCCATCCAGCAAGCGAGCTTTAAATTGGACTCACAAAGAAACTGAAGTACTTTTGGACGTAGTACAAAAATACAATTTGAAACAAATGAAACGAGATGATATTGCTGCAGTTTTTGATGAAGCATCCATGCAACTTAGATTACAAAGCTTCAAAAGATCTTCAGAACAATGTCGAGTTAAATTCAAACATTTAAAAGTAAAATACTTTAGCGCACTTAAAAAATTAGTTAGCGGCAACGACCATCCAGAAAGATATTTCTATCATTTTGATAGAATGCGAGATATTATGCAATCTTTAAGTTCCGATGGCAATACAGACACTGACAACGAAAACAGCGATTTTACCCAAGATTCAGAACATTATGAAGTTGAATATTTAGAAGATAATTTAGATGATGGTGCACCAGAACCAGAAACGTTTGCAAAAGTATTTTTAAAAGAAGAAAATCATGCAAAATTTTCTTGTTTACCGAAACATAATCGAAAAGGAAGAGTCATTTGGTCTCAAACAGAAACACAATATTTATTAAATTTACTAAAAGCTAAGAATGTAAAACGTTACTGTCGAAGACAAACATTTGAAGAAATTGCACAAGAAATGACGAAAGCAGGCTATAAAAGAAATTCACAAATGTGTATGATTAAATGGAAAAACTTAAGGAATCAATTATATTCATGTATAAGAAACATGGTTGAAGGTAAAGATGAATTATGTCCATTTTATGATGAAATTTGTGAAATTGTTCAAAAGAATGGTCAAGTTGATATCTCTTTAATTTCTGATCAAGATCACGGCGAGTTTGATGAATCTGAAGACCAATTTGAAGCGGAAGATTCTTCTGATCATAAATTTCACGATACTTCTTTGGACACCGAAGAAATTGAATTTCATAAAAGTCCTGAAAAATGTGGCGAGAAACAAACGAATGAGAGAAACAATAAGAATCCACTTGAGATTGAAATCAATGAGAAAAAAAGACCCTTCCCAGTTGAAAAACAAATTGTTGAAATGTCAACTGTTGTGCATGAAAATAAAAAGTTTAAAAACAGCGAAACCAACACTGAAATTACAAATAATACTGATGATAGCTCCAGATATATTTGTAATTATAAAATGGATGATACAGAACATTATTGTATGTCTTTAGCTACCACTTTTAAACGGTTATCAAAGAAAAAACAAGCCAAGTTAAAAATTGAGTTACAGAAATTATTGTATTCTGCAGAATTTGATGAAGATTTTTGA
- Protein Sequence
- MQSEASCKDPWQKSDTLHLIKLISEFKSSSDSDKVNNNELYIQAANKLFEYGISRTYIQCKSKWKELVDSYNEYKKTQTGDPPPYYTELDNMLSEAFSEYDSASEGINPFGTPWTQYETTTLIRVMKVGNFINKLKHEEPLNVYEQIAQYMQKVGPITRNKEDIQQRWRNLKQSYIKYIKGDLLHFKYFELMDALLDWEPNSIAFEEDQFKDGHEYGDESYQNPDDYEIKGAPSSKRALNWTHKETEVLLDVVQKYNLKQMKRDDIAAVFDEASMQLRLQSFKRSSEQCRVKFKHLKVKYFSALKKLVSGNDHPERYFYHFDRMRDIMQSLSSDGNTDTDNENSDFTQDSEHYEVEYLEDNLDDGAPEPETFAKVFLKEENHAKFSCLPKHNRKGRVIWSQTETQYLLNLLKAKNVKRYCRRQTFEEIAQEMTKAGYKRNSQMCMIKWKNLRNQLYSCIRNMVEGKDELCPFYDEICEIVQKNGQVDISLISDQDHGEFDESEDQFEAEDSSDHKFHDTSLDTEEIEFHKSPEKCGEKQTNERNNKNPLEIEINEKKRPFPVEKQIVEMSTVVHENKKFKNSETNTEITNNTDDSSRYICNYKMDDTEHYCMSLATTFKRLSKKKQAKLKIELQKLLYSAEFDEDF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -