Pnig052149.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- Trerf1
- Assembly
- GCA_947425015.1
- Location
- OX380339.1:12396870-12446665[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6 1.4e+04 -2.2 0.0 31 43 574 586 567 586 0.89 2 2 3.4e-10 7.4e-07 30.7 0.0 3 46 1241 1284 1239 1284 0.96
Sequence Information
- Coding Sequence
- ATGTTTGCATTAAGGCTGATTGAACACAAGGAATGGGAAATTATCTTCGTAAAATCAATCCAATATTCACCATCGGGTGTCAAACTGCAAATTCAAAAAGTGGCTAAACCGTACTTGACGGCCAAACCTGAAGTTGGCTGCAGGTCGCTAGTAACTTCTGGGGAAAACGGCAGTTCGAACGTGCTCGTTGCCGAGGAACAAAAGAAGAACGGAAACGGGGCGGCGGAAGTGGTGAAGCTCACCGTTAAGAGGGCGCGACCGAAGGCTACTTCACCCAACCGACAGGGCCCCCAACAGTGCCAGGTGTGTGCCAAGGTGTTCGGGAACGCATCAGCCTTAGCAAAGCACAAGTTGACGCACAGCGACGAACGGAAATATGTCTGCACTATGTGCGGTAAAGCCTTCAAGCGGCAGGACCACTTGAACGGTCACATGTTAACCCACCGCAACAAGAAACCCTACGAGTGCAAGGCAGAGGGCTGTGGCAAGTCCTACTGCGACGCACGATCGCTCCGCCGGCACACGGAGAACCACCATAGCGCGGCGGGGGCGGCGGCGGCAGCGGCCAGCACGGCCTCCAGCAGCAGCACGGCGACGGTGTCTGCCACGACAAGTATGTCACCGGCCCAAGGCGCGGCAGCGGGCGATGCGGCTAGTCCGCATGGCTCCTCGTGTATTCAGTACGCGCCGCCTCCCACCACCACGGCCACGGCGACGACGACCACCACGACGAATAGTTCGGGGAAAAGTCAGTTGCAGCAGCTGCTTGCTACGGAACCTGTAAAGGGTGGAGCAGGAGGAAACAACGATGGCTTGACGAAGCAGCAGTTGGACTTAATCCATCAAATAATGGAACAAACGCAAAGACAATCGCAGCCTGTTACCAAGTCTCCAGCGAAAACCGCCTCTAAACCTACCACCAAGCAACCCTCCAAGGTTCAGCGGGTATGGACATCAACGTCGCAACAAACATCATCAACAAAGACCAGCACAAATAGTAGCGGATCCAATTCTTCGCAGGTGAAGGCGACGAGTGCGACGTCTGGCAGCGCAACGATGACAGCGGCGGCGTCTGGATCCACTTCTACGTCTAGCACCACCGCCGCCGCCTCCGCCGCACCCAAGCCTGAGCTCAAACCCGTCGAGTGTAATTTGTGCCACAGGAAGTTCAAGAATATCCCCGCGCTCAATGGCCATATGCGGTTGCATGGCGGCTACTTCAAGAAGGATGCAGAGAATAAGAAGTGCGAAAAGAAGGAAAGCACAGGACCGCCTTTGCAGACGGCCAGCGTTAGCGTACGCGCTCTCATCGAAGAAAAGATCATCAGCAAGAGAACAACGAACCCGGCCGCGTCGCAGCATTCGAGCGGCAGCGGTTCCACTGTGGCGGCGAGCGGTAGCGCCGTGGGGGCTGGAGGCGGAACACCTGCGAACACACCCACCGAGAGCACCGCACCGCCGCTTTATCCACTCTCCATGCATTCCACGGGCGATGCGGACGCCAGCGCCAAGGTGACGTCGTTCGTGGTGCCGGCGCCGCCTGCCCCTCAGCCCGCCGTCGCCGCCCCTGTGCCAGCGGCCGCGCGCAGACATTCCGACGCCGAGTTCACAGTCCCCCGCGCGCCTTCCACCGCCGCCGTGCAGCAGGAAGCCGAGGCTCTGGCCGACATGATCCTCAAGCGCGGCGGCAAGGTCTCTGTCAAGCGTGCTATCTCCGACCCCGGCAGATCTTCGCAACAAATACAGCTTCAGTTTCAACCTGGTGATGCTTTTGCACTCGCTGGTGTCACATACCAGGCTGAAGACGTCGGATACCTCTCGCCGAGTCTTCAAGATGATGTGTTTCACCAGGTGCAGGACACTATGCTGTTGCAAGGAGTTGATGCGCAACAACTGGTTCAGTTTCAAGCTTCCTTGCTACAAGAACAAGATGAACAACTTCAAGACATTGCTTCATTGGAGGATTATGCGACAGTGACAGCAAGTTTGCAAGAAACCGTGGTTGACTCTGCGACATATCAAGCGAGACAAGTAGTAAATCAAGAGTTACAAGCGGTGCTGGATTCACCGTTGCCAGAAAGTTTAGCGGAGTTTAGTACTTTTCACGCTAGCAATCTGGACATGCCGTCGCCGTCATACCAGACGCAATCACCAGCTCAGCAGTTTACGAACTCTCCACACACGTCTCTGGCTGCACAGTCTCCGCTGCAGTCACCATTGATTCGGCATGACTCGCCTGGGTTTGCTTACCCCACTCCACCGGCCAGCCATGAAGGACAAAGTCCATCATTCGTTCAAACGTCAATGTTGCCGATGATTTCTCCACAACAAGCCTCGGATTTTGTTCAGAACGTCAGTACGACGAGAGACCCGGAAGAACCTCCTCAGGCATCGTCGCCACTCTCTGCAGCATTTTTTACATCAACAATGTCGAGTGCAGCGGCTGTAGAAGAGGCTTTAGAGGAAGTGTTACCTGGTGAAAGTATATCACCAGATGATATCTATCCTTCTTTATCAAACTCCCCGCCTCCACAATCTCCCATCTCTGTCGCAATGACGCCTGTTCCATCTCCGTTATCAAGTATACCTACCTCTACGACTTCCGTTTCGTCTCCTAGGCCGCCTGCGTCGTTCACGCCGGTTTCAACAAATATCACGTTTCCAATGTCGCCTCATTATACGTTACAGTCTCAAATGATGCCTAACTCTGATGATCCGTTGTTATCTAGTAGTCCTAAAGACTTCTCAACGAGAAAACGGTTCGAATTCGGCAGTTTACAATCTGTAAAGATTGTGGGAAATGGATACATCGATTTTGGGAATCCCAATCTTGCTGGAATACTCGTAGACAATAATGGCGAATTAAAATTTATTCAAACTTCAGGAAGTCCTATTCAGGCAAAAAATCTTATAGTTACGTCAAATATTACATCTCCAAATACAACGATTAAAGAAGAAGTTAAAAATGTTCCTTTGCAGAGATTGCAGAAAATTAGTAAAACAACGCAATGTACAATACCAGCGAATAAAAATACTATTCAGAGGCCTAAGCTGCATGTTGCAGTCGACAATGTCAAAACTGAAGAAGCTGATGATGTTTTTCTCAGTCCTACATCCATTCCGGCAAGTCCAAACAGAGTATCGCGGAAGAGGCCGCGATCAGAACCATTACAACTGCCGGTGGTGCACCAATCGCGTCTTCGAGCAGCACGAGGGCGACCGCCTGGTGCTGCTCCTTACACTCCTTTGCCGATGTTAAATCCTTCACGACACGGACCTGGACTGTACTGGAATGCCAAACTTAAAACCACTGTTGCAGCCAATTCTCAAAATAATCAAGATGATAGTTCTATATCATCGACTTGTGAATCAGTTCCAGAGAGTGATTCAACCCCACATATAAATGTTGGTTCTCAGTATCAATGTACAATACCTCCATGTAAGTTAGGAAGAGATAAAGATGACAGAGAACCAACGTATGAGCACCTACTTTGGGATCCTGGCATCAACAACTATTGCACGGATAATGAAGTTGACATGTACTTGGATTTCGCGTGCTGTGCAGCAGTTCCCGGTGGTGGCCGAAACAAAGAGTACGCCTTACATTTGCTTCACATGTGTGGTGGAAATATTCATGAGGCAATGCTGAAGTTAATGCAACCAACGCCTACGTTACCACCAGATCACCCGCTTCTACACTATCATTACTCCGAGAGTGATCAGTGGACGATAGCAGAAACTGAAGGCTTCCATCAAGCTATTCAGAAATATGATAAAGACTTCTTTAGCATTGCACAAGAGATTGGTTCAAAAACTGTAAAACAATGTATACAATTCTACTATGTTTGGAAGAAAGTTTGTGTGGATGAGTACAGACGGCTCCGGTTAAATCGGGAACAAAAAGGTTACGTGAGTGGTAAATCAAATACCGATGTCGACTTTGAAGAGAAGCCCTGTTTAGATACCAAATTACTTGGAATTGCTGAAACAGAATCTCCCATGTCTGTAACAGATCATAGGCACTTTAGCTGCGATTATTCCGATTGTTCAGCTAGTTTCAACTCTCGGGCAGCTTTGACGGGTCACATTCGAATACACGGTGGCGCTGTTCGTCGATCACCGACTCCTACCTCCCACTTAGAGAGGCGAGTAAACAGTCTCACACCCACGCCTGTGACGACGGAACTTTCTGAAGAGTTCCCTTGCAAAATATGCGGGAAAGTATTCAGTAAGATAAAAAGCAGAAGTGCGCATATGAAATCCCATCGACCGCCGGACGTAGACCAGAAGAAAAAGAGTACCGAATATCTGCCTGGCCTAGTTCCTGACACGACCATATCAAGTCCAGCCGCGCATGCACCGTGA
- Protein Sequence
- MFALRLIEHKEWEIIFVKSIQYSPSGVKLQIQKVAKPYLTAKPEVGCRSLVTSGENGSSNVLVAEEQKKNGNGAAEVVKLTVKRARPKATSPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSAAGAAAAAASTASSSSTATVSATTSMSPAQGAAAGDAASPHGSSCIQYAPPPTTTATATTTTTTNSSGKSQLQQLLATEPVKGGAGGNNDGLTKQQLDLIHQIMEQTQRQSQPVTKSPAKTASKPTTKQPSKVQRVWTSTSQQTSSTKTSTNSSGSNSSQVKATSATSGSATMTAAASGSTSTSSTTAAASAAPKPELKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKESTGPPLQTASVSVRALIEEKIISKRTTNPAASQHSSGSGSTVAASGSAVGAGGGTPANTPTESTAPPLYPLSMHSTGDADASAKVTSFVVPAPPAPQPAVAAPVPAAARRHSDAEFTVPRAPSTAAVQQEAEALADMILKRGGKVSVKRAISDPGRSSQQIQLQFQPGDAFALAGVTYQAEDVGYLSPSLQDDVFHQVQDTMLLQGVDAQQLVQFQASLLQEQDEQLQDIASLEDYATVTASLQETVVDSATYQARQVVNQELQAVLDSPLPESLAEFSTFHASNLDMPSPSYQTQSPAQQFTNSPHTSLAAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPSFVQTSMLPMISPQQASDFVQNVSTTRDPEEPPQASSPLSAAFFTSTMSSAAAVEEALEEVLPGESISPDDIYPSLSNSPPPQSPISVAMTPVPSPLSSIPTSTTSVSSPRPPASFTPVSTNITFPMSPHYTLQSQMMPNSDDPLLSSSPKDFSTRKRFEFGSLQSVKIVGNGYIDFGNPNLAGILVDNNGELKFIQTSGSPIQAKNLIVTSNITSPNTTIKEEVKNVPLQRLQKISKTTQCTIPANKNTIQRPKLHVAVDNVKTEEADDVFLSPTSIPASPNRVSRKRPRSEPLQLPVVHQSRLRAARGRPPGAAPYTPLPMLNPSRHGPGLYWNAKLKTTVAANSQNNQDDSSISSTCESVPESDSTPHINVGSQYQCTIPPCKLGRDKDDREPTYEHLLWDPGINNYCTDNEVDMYLDFACCAAVPGGGRNKEYALHLLHMCGGNIHEAMLKLMQPTPTLPPDHPLLHYHYSESDQWTIAETEGFHQAIQKYDKDFFSIAQEIGSKTVKQCIQFYYVWKKVCVDEYRRLRLNREQKGYVSGKSNTDVDFEEKPCLDTKLLGIAETESPMSVTDHRHFSCDYSDCSASFNSRAALTGHIRIHGGAVRRSPTPTSHLERRVNSLTPTPVTTELSEEFPCKICGKVFSKIKSRSAHMKSHRPPDVDQKKKSTEYLPGLVPDTTISSPAAHAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00767655;
- 90% Identity
- iTF_01275695;
- 80% Identity
- iTF_01275695;