Pnig037423.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- kn
- Assembly
- GCA_947425015.1
- Location
- OX380340.1:12888953-12891589[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-42 6.1e-38 132.0 0.0 36 124 12 100 6 106 0.93
Sequence Information
- Coding Sequence
- ATGACCGGTAATACACTTCACTCTCTGCCATCTGCCGATGTTTTGTCACACTTCAACGTGGGCGTCGGTCGGGCGCACTTCGAGAAGCAGCCGCCCAGCAACCTGCGGAAGTCCAACTTCTTTCACTTTGTCATCGCGCTCTATGATCGCGCTGGCCAGCCCATTGAGATCGAGCGCACCGCCTTCATCGGATTCATCGAGAAAGATCAGGAGACCGAAGGACAGAAAACTAATAATGGGATTCAGTACCGGCTGCAGCTCCTCTACGCCAACGGTAAGTGCGAGCACTCTTCGTTTTACTTTCCTACATCCCTCGATTATTGTATATGCTGA
- Protein Sequence
- MTGNTLHSLPSADVLSHFNVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDQETEGQKTNNGIQYRLQLLYANGKCEHSSFYFPTSLDYCIC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -