Pnig037408.2
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- kn
- Assembly
- GCA_947425015.1
- Location
- OX380340.1:12729771-12750469[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-121 1.1e-116 392.1 0.0 208 387 44 231 37 236 0.98 2 2 3.7e-09 6.6e-05 23.0 14.2 415 560 239 389 233 400 0.61
Sequence Information
- Coding Sequence
- ATGCACGCGAGGGTGGACGACGGACGCAGAGACGCGACTGTCTTAGGGTTCTATGTTCCTATGTTCTTTGATGCCGCAAAATGGCTGCACGTGGCTCTTGCTTACAAGACGATCAACTATTTATTTCTGTTGCAGGTGGTGATAGCGACGCAGGTAGCAGTGGACGGTCCACTGTTAGCAATCTCCGACAACATGTTCGTGCACAACAACTCCAAGCACGGCAGACGAGCGAAGCGCCTGGATCCCGCTGAAGGTCTATACCCGCCACTTCCCGTTGCAACCCCTTGCATAAAAGCCATCAGTCCAAGTGAAGGTTGGACATCAGGAGGTTCAACTGTCATCATCGTAGGTGATAACTTCTTCGATGGCCTTCAGGTTGTCTTCGGTACCATGCTCGTCTGGAGTGAGTTAATAACACCGCACGCAATAAGAGTACAGACGCCACCGAGACATATACCGGGCGTTGTGGAAGTGACGTTGTCGTATAAATCGAAACAGTTCTGCAAGGGCGCCCCTGGACGATTCGTCTATGTCTCAGCTCTCAACGAACCAACGATAGACTACGGCTTCCAGAGACTTCAGAAACTCATACCGAGGCATCCGGGCGATCCCGAAAAGTTACCCAAGGAAATAATCCTCAAACGAGCAGCAGACCTAGCAGAAGCCCTCTACAGCATGCCACGCAACAACCAGCTATCGCTGAGCGGTCCACGATCTCCTAGCATGGCCAACAACGGCATGACAGGCGGTTTCAATACTTACACGGGACAACTGGCCGTCAGCGTGCAGGACACCGGAAACGGTCAGTGGACTGAAGAGGAGTACGGGCGAGCGGCGAGCAGCAGCGTGAGTCCTCGCGGGGGCGGCTACTGCAGCAGCGCGTCCACGCCGCACTCCAGCACGGGTGGCGGCGGTTCATACGCCGCAGCGCCCGCACCCGCCAGCCAGGGCCCCGCCGTCAACGGCTACGGCGCCGCCACGCCAACCTCGGGGGCTCAGCTGGGGAACATGCTGCCGGGGTCGCCCTCTGGCATCTTCAACTCCACCACGATTGCAAACGAAAGTTCAGGGCATTATCATTTCGGGTCTGGGACGCGGGCGGCGGCGGCGGACAAAGAGCGCAGCGCGTTCGCCCCCGTGCACCCTATCTACCCCGCCGCCGTGCCGCAGTTGCACCAGCCCGCCGCTAGTTGGCACCAGCCCGCCGCTAGTTGGCACCACCTCACCGTCCAGTAG
- Protein Sequence
- MHARVDDGRRDATVLGFYVPMFFDAAKWLHVALAYKTINYLFLLQVVIATQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPAEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSLSGPRSPSMANNGMTGGFNTYTGQLAVSVQDTGNGQWTEEEYGRAASSSVSPRGGGYCSSASTPHSSTGGGGSYAAAPAPASQGPAVNGYGAATPTSGAQLGNMLPGSPSGIFNSTTIANESSGHYHFGSGTRAAAADKERSAFAPVHPIYPAAVPQLHQPAASWHQPAASWHHLTVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00429627;
- 90% Identity
- -
- 80% Identity
- -