Pnig013836.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- grh
- Assembly
- GCA_947425015.1
- Location
- OX380347.1:28779525-28790531[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 3.4e+04 -4.7 2.9 92 113 99 120 92 148 0.52 2 2 1.1e-62 3.1e-58 198.2 0.1 29 221 583 770 568 772 0.93
Sequence Information
- Coding Sequence
- ATGATGCTAGAAGCCGAAGCCGAAGCCGAAGCTGTGATGACTGATGATCGATGGATGCTTCCTTCTGCTTACAGCCCTGCCCCTGTATCCAGATTACTAATAGCCATCACTTTATATTATCGTGCGTTCTGTGTTTTTTGCACGAGCAGACGAAAGCGCAAGAACAGTATAGAggcggtgcaggtgggtggaagtgacgcgggcgggagcgaagggggcggtggcgaaggcggcggtgtgtccccgctgcaggggcccacggcacgcatggcagaactgtcgagcgaccagcagcagcagcagcagcagcagcagcatcaacagcatcagcagcaccagcatcaacaccaccaacaccaacatcaccacgggcaggctggcgaccaagaacaacatacgtggcgtgcgtactacgagcatccgctcaccgccgccacgaccgccatgctcaacatctctggaggcggtgccgacgacCAGGCCGCCACGATGGGACTCATCTACGAGTACTACAAGCTGCCGCCGCTCGCCCCCGACTCTGCCAAAGACAAGCTCGCCGACATCTGGCCGAGCAGTTCGCAGCATAGCGGTATTCTGACGTCACAGCTAAAGGCAGCCAATGGACTAGTGAGTGGGGCGGGGCTCGAGATCGCCGCACCGCCCCTCGGCACCGCGCTCGGCGGACAGCTCGGTGCGCAGCCTGACATCGGGCTGTTCATCAACCAGCACGTGGGATACGCACAGGCACAGCCTACGGCGGCCGTCGGCGTCGGCCAGAACCTGCAGATCGTAAAGCGCGAACCCGAGGATCTAAGCCATCACCGCAAGCTGGACAGTGGCTCACCGGAGCATCAGCTTCAACACCAGCAGCGTCCCAAGGTGGTGTTGGTGTCAGCAGCCAACGGACAGCCGAACGACCTGGTGGTGGACGTGAACAGTCCGCACGCACTTATCAAGGACGAGTCGCACGTGCACCGCGGTCTCAACTCGCCGCAACACGGTTCACGCTCCATCAACGGCACACCCACGTCCACGCACAGCAGTCTACTGGCTGACGGCTCGTCTAACGCCGGTCCCATCGAACTGATCTCTGCGTCAGACGCCGGTCTCAAGCCCACCATGTACACGGCACAGATATACACCCATGGCAGCGCCAGCGGCTCGCCCTCGCCCATTCCATACGGCGAATATACACAGAGCTACGTGGGGCGCGCGCCTACTTCCAGCACCAGTGCCAGTGCCAGCGCGAGCGCCGCATTCACCGTGGCCGATCCTTACTATCGCGAGTACTTTACGACGGTTACGTCAGCCGGTGGCGGTACGCCTACCCCCGAGCCTGTGTACTCCACGCAGCTGCGTCAAGGCTACGTGGACGAGGGCTCGGGTGCTGCTACAGCCAGTTTCGTGGAGCGCTATGTGCGCCAGACCAGCGCCTACCACAGCAAGGGCGTTATAGCTGCTGCCGGACTCACTGTGGACCTGCCTAGCCCCGACAGCGGCATCGGTGCCGACGCCATCACACCAAGAGACCAGAACGCCTTGCAACAGTCGTTCGACTACACGGCAGACCTATGCCAAGGGCAAGCGGGATTATTAGACCCCACGGCGCTGGGAACCGCACGCGCTCCTAGTGCCGGAGCGTCGCCGCAGGCCGCCGGCGCCACAGGCCGCAGCCGACCCTGGCACGACTTCGGCAGACAGAACGACGCCGACAAGATACAAATACCAAAACTATATTCTCCGGTCGGATTTAAATACCATTTGGAAACGCCCATTTCAACATCTCAGCGCCGAGAAGATGATCGCATTACATATATCAACAAAGGACAGTTCTATGGCATCACTTTGGAATACATTCCTGATCCTGACAAACCGCTTAAAAGTCAAACTGTAAAAAGCATAGTCATGTTAATGTTCAGAGAAGAAAAAAGTCCTGAAGACGAAATTAAAGCCTGGCAGTTTTGGCATGGGCGACAGCACTCTGTCAAGCAACGCATCTTAGACGCAGACACGAAGAACAGTGTAGGTGTCATAGGGTGCATAGAAGAAGTAGCTCACAATGCGATAGCTGTTTACTGGAATCCTCTGGACAGTTCCGCTAAGATAAATGTAGCTGTCCAGTGTCTTAGCACAGATTTCAGCAGTCAGAAGGGTGTAAAGGGTTTACCTCTACATTTACAAATAGATACGTATGAAGAACCTCGTGATTCCACCATTTCACATCGTGGCTATTGTCAAATCAAGGTTTTCTGTGATAAGGGAGCTGAAAGAAAAACTCGTGATGAAGAACGCAGAGCTGCAAAGAGGAAAATGACAGCAACCGGACGGAAGAAATTAGATGAGTTGTACCATCCAGTCTCCGAACGTTCTGAATTCTACTCCATGAGCGACTTGGGCAAACCACCCGTGCTGTTTACACCCGCCGAAGATATAGATAAGCTAACATCAATGGAACTGCAAGGATTCTACAACCACGAGACGGACAGTTCACTTAGTGGTGGCGGCGGCGGCGGCGGAGGTACTGGAGCCGGCGACTCACAACACCTAAAGGCAGGCTCACCATTCCTGCTACACGCAGCCGTCAAGCCTCCTACGACGCCAACGCTCAAGTTCCACAACCATTTTCCGCCGGATGGTGATAAGAAAGATGGCATCTTGGAGGCAGCTGTAGTGGCGGACGGCTCGGTGTTCTCACCACCGCTTAAGCGACCTAAGCTTATGGCGGCGCCGCCGCTCAACGAGCGCGTCATGCTGTATGTACGCGAGGAAAGTGAGGAAGTGTACACGCCGCTGCACGTAGTGCCGCCCACCACTGCTGGACTGCTGAACGCGATTGAACATAAATATAAAATAGACTCATCGCGAGTCAATAACTTATTTCGCAAAAATCGAAAGGGAATTTTGGCCAAAATTGATGACGAGATGGTGACGTATTACTGCAACGAGGACCTGTTTCTGCTGGAAGTAAAGCCCGTGGTGGGCATCGACGACGAGCTATACGACATCACGTTCATCGAGTTGCCCGACCACTGA
- Protein Sequence
- MMLEAEAEAEAVMTDDRWMLPSAYSPAPVSRLLIAITLYYRAFCVFCTSRRKRKNSIEAVQVGGSDAGGSEGGGGEGGGVSPLQGPTARMAELSSDQQQQQQQQQHQQHQQHQHQHHQHQHHHGQAGDQEQHTWRAYYEHPLTAATTAMLNISGGGADDQAATMGLIYEYYKLPPLAPDSAKDKLADIWPSSSQHSGILTSQLKAANGLVSGAGLEIAAPPLGTALGGQLGAQPDIGLFINQHVGYAQAQPTAAVGVGQNLQIVKREPEDLSHHRKLDSGSPEHQLQHQQRPKVVLVSAANGQPNDLVVDVNSPHALIKDESHVHRGLNSPQHGSRSINGTPTSTHSSLLADGSSNAGPIELISASDAGLKPTMYTAQIYTHGSASGSPSPIPYGEYTQSYVGRAPTSSTSASASASAAFTVADPYYREYFTTVTSAGGGTPTPEPVYSTQLRQGYVDEGSGAATASFVERYVRQTSAYHSKGVIAAAGLTVDLPSPDSGIGADAITPRDQNALQQSFDYTADLCQGQAGLLDPTALGTARAPSAGASPQAAGATGRSRPWHDFGRQNDADKIQIPKLYSPVGFKYHLETPISTSQRREDDRITYINKGQFYGITLEYIPDPDKPLKSQTVKSIVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGVIGCIEEVAHNAIAVYWNPLDSSAKINVAVQCLSTDFSSQKGVKGLPLHLQIDTYEEPRDSTISHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVSERSEFYSMSDLGKPPVLFTPAEDIDKLTSMELQGFYNHETDSSLSGGGGGGGGTGAGDSQHLKAGSPFLLHAAVKPPTTPTLKFHNHFPPDGDKKDGILEAAVVADGSVFSPPLKRPKLMAAPPLNERVMLYVREESEEVYTPLHVVPPTTAGLLNAIEHKYKIDSSRVNNLFRKNRKGILAKIDDEMVTYYCNEDLFLLEVKPVVGIDDELYDITFIELPDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01104034;
- 90% Identity
- -
- 80% Identity
- -