Pnig023239.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- Xbp1
- Assembly
- GCA_947425015.1
- Location
- OX380350.1:6163019-6165464[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-15 2.5e-12 48.1 11.6 2 64 46 108 46 113 0.95
Sequence Information
- Coding Sequence
- ATGAGTACACCGGTTTTAATAACATTACCGAAGTTTGTTTCCACAAATACGAATCCAGTTTTCAAGGATTATGTGGAATGCAAGTCGTCTGATGCGTCAAAAGGACGAAAAAGAAGGCTGGATCACTTGAGCTGGGAAGAAAAATTACAACGCAAAAAATTGAAGAATCGCGTTGCTGCCCAAACATCCCGAGACCGGAAAAAAATGAAAATGGAAGAAATGGAATCAACAATTAAAGACCTCATGGACCAAAATGACCTACTCGTGGAAGAATGCCAAAAACTACGAAATCTCAACAAGAAATTATCAACAGAAAACACAGAACTCAGATCATCACCAACTTGTCAATGCTCTAAACAGAACAATTCTGTCGATTGTAATCTTTCTATCGGATCAGCAGACACAGACTACTCTGGTGGTATTGAAGATGCTTCTGGCTTGCCTGCTGTCACAGACCTCCTTGAAGACTTCGACACAGAACTCGACATTGACAAACTTGAGGAATTCGCTCAGAGTTTACTCGAAGATATCACCGCAGACTTGGAGACATCTGCTGCGGAAAGACAGACTTCAACGAATTGTGTCAAACAAAATTATCCAGCAAAAGTGGTGGGGCCGGCACCAAAACAACTGGAACCCAGTCGAATCAAAAGCCTAGAGGATTTACCACCCTCCAGCACCATTCCTGACCAGCAGTCCTCAACAGTCGTTCACCAGGACAACCTAGAATCACAAGATATGATCTACGCAACAATAGACGATACAGACAACTGCATAACGATCATTGTATCAAACGAAGATGAAATTTCGACCAATGAGGTTGAAGTTGTTGCAGAAGAAACGCAGAATCTCGCGGATTTCGTTTCTAATTATACTGTTGTTGATGATGATGAGAATATTAATGTAGATTTGTCTTTAGCAAGTGTTAAATCAGAAAGAGCGCTTTCTGACTGTGGATATGAGTCTTTAGGGTCGCCGCACAGCGAATCTAGCGATGTAGAAATGTCAGAATTGTGGAATCAAAGCTTTACGGAATTATTCCCAAATTTGATGTAA
- Protein Sequence
- MSTPVLITLPKFVSTNTNPVFKDYVECKSSDASKGRKRRLDHLSWEEKLQRKKLKNRVAAQTSRDRKKMKMEEMESTIKDLMDQNDLLVEECQKLRNLNKKLSTENTELRSSPTCQCSKQNNSVDCNLSIGSADTDYSGGIEDASGLPAVTDLLEDFDTELDIDKLEEFAQSLLEDITADLETSAAERQTSTNCVKQNYPAKVVGPAPKQLEPSRIKSLEDLPPSSTIPDQQSSTVVHQDNLESQDMIYATIDDTDNCITIIVSNEDEISTNEVEVVAEETQNLADFVSNYTVVDDDENINVDLSLASVKSERALSDCGYESLGSPHSESSDVEMSELWNQSFTELFPNLM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -