Ppup005148.1
Basic Information
- Insect
- Pteromalus puparum
- Gene Symbol
- nfxl1
- Assembly
- GCA_012977825.2
- Location
- Scaffold:741819-747339[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2 1.8e+04 -4.8 1.9 15 19 43 47 43 47 0.85 2 17 0.11 9.3e+02 -0.0 0.3 4 10 78 84 77 84 0.96 3 17 1e-08 9e-05 22.4 16.7 1 19 92 109 92 109 0.99 4 17 0.001 9 6.4 13.2 3 18 147 162 144 163 0.94 5 17 0.41 3.6e+03 -1.9 0.2 6 10 188 192 187 194 0.88 6 17 0.00011 0.97 9.5 9.2 1 19 198 217 192 217 0.89 7 17 0.00011 1 9.4 9.1 1 18 253 270 253 271 0.97 8 17 0.0059 52 4.0 7.6 1 12 305 316 305 316 0.94 9 17 0.41 3.6e+03 -1.9 1.0 6 10 326 330 325 330 0.92 10 17 7.5e-08 0.00067 19.6 14.6 1 19 336 354 336 354 0.93 11 17 0.00062 5.5 7.1 7.6 9 19 402 412 400 412 0.90 12 17 0.0005 4.5 7.4 6.8 1 12 422 432 422 432 0.95 13 17 0.74 6.6e+03 -2.7 5.8 14 18 463 467 463 468 0.89 14 17 0.00012 1 9.4 5.9 1 12 504 515 498 515 0.91 15 17 0.68 6e+03 -2.6 1.7 6 10 540 544 539 544 0.88 16 17 0.00099 8.7 6.5 14.3 3 19 553 569 552 569 0.92 17 17 1.9e-05 0.17 11.9 11.1 1 16 614 628 614 633 0.95
Sequence Information
- Coding Sequence
- ATGCGTCACCAGCATATTTGGAGTTGTGCAGAATGTTTCACTTTTATGCATTTACCTTGCATTCAACATTGGGTGAGGGATAGTTTGAGTTCTAAACATGAGAAAGGAATTATACCATTGTGGGGATGCCCTAAATGCAGAAAAGAATATAGAGAAGATCAAATACCAAAAAAATATACATGCTTTTGTGGAAAAACTGAAGATCCACCATATCAACCATGGTCGATTCCTCATTCTTGTGCGGACATATGTAGCAAGTTTCTTTTACCAAAATGTGGACACAAATGCATGCTTCTATGTCACCCTGGTCCATGCCCCCCGTGTCCAAAAATGGTGTCAGTTACCTGTTTCTGTACAAAACAATCACTTTGCCCACGGAGATGTAATGCAAAAGAGTGGTCCTGTGGAATAGTTTGTAATAAAAAATACAAAACATGTGAACATGCATGTGTTGAAAATTGTCATCCTGATCCTTGTCCACCTTGTGTAAAAAAAGTGCTCACAGCCTGCAATTGCAACAATAAATCTGAGTTAAGAAAATGTAATGAATCATTTTGGCAATGCAACAAAGTTTGTGGAAGACGTTTCTCATGCAATGTTCATATTTGTGAGAACTACTGTCACAAATCTGGAGATTGCAATACTTGTCCATTAGAACGTAATAGAACTTGTCCTTGTGGTAAGAAAAGATATGCTATAACATGCAAACAGCAGCAAGTACCAACATGTGGAGACACTTGTGGAAAATTATTGGATTGTGGAGCTCACTATTGTAATATGAGATGCCATACAGAACGTTGTGGCCAATGCTTAGAAGTTGTAACAAAATCTTGTCGTTGTGGTAGTTTTAGTAAAGAACTTTCATGTACTAAAGAATTTCACTGCAATAAAAAATGTTCTCAAGTAAGACTTTGTGGTAGACATCTTTGCAATAAAAAGTGCTGTGATTGTTTGATTAATAATACTTTTAAGGCCTGTGAAAAGGTATGTGATAATACTCTAAACTGCCGCAAACATAAATGCTCTGCTCCTTGCCACAGTGGACCTTGTTACCCGTGTCCTCGTACTATTGTTATTCAATGTCGTTGTGGCAATAGCAAAATTACTGTACCATGTGGAACACTTAAGAAGATCAAACCTCCAAATTGTAACAAGATGTGTAAAATTCCTCCGATTTGTCATCATCTAAAAAGAGAGTCACACAAGTGTCATCAAGGTGTCTGTCCACCTTGTCGTAAAACATGTAAATTAACTTATAAAAGATGTGGTCACGCTTGTCAAGTAGTGTGTCATACTAAAGTTTGGACTAAAGTGAAACCTAATGGAGTTACCAAACCTATTGGACCATGGGAAAATCATAAAGAAAGATGGGAATATCAGTCCTTCCCATGTCCTCCTTGTGAAGTCTCTGTAATGGTCACATGCCTTGGAGGACATGAAACTATGCCTTGGCCTTGTTACAAAGCTGTTTCAACTTCTTGTCTTAGAGAGTGTGGACAATTATTGATGTGTACAAATCATTATTGCGAAAAACTGTGTCATAAGCTAAACTCATTGGATGGCGACGATGATGATGATGATGATGATGATAATGATGATGATAATAAGTGTATGGAATGTGAAAAACCATGTAGTTTTCCAAGACCAAAGGGATGTACACATGCTTGTCCTAAATTATGTCATCCTATTCCATGTGAACCATGTAAACAGCTAGTAAAAATTTATTGTCACTGTGGAATCAATACTCTTTATATACGCTGTGTTCAACTCACTTCTGCCACCACTGATAGACGCAGTGAACTTCTACAATGTGGAAATCAGTGTCCCCAAAATTATCCCTGTGGACATCGATGTACTAATAATTGCCACCCTGGATTATGTCAAAAAGCTGAACTTTGCAATAAGAAAGTTAAAATGTTTTGTAACTGTAAAAGATTAAAAAAAGATTTTTCTTGTAACATAGTACGAGCTGGAAAAGCTTCTGTGGAATGCGATAACTTATGCCAAAAGAGAAAAGAGGAATTGCATAAAATAAGAGAATTTGAGTTAGAAAAAAAACAAAAAGAGGAAGAACTAAAAAATTTAAAGGAAATCGAAATGTTTGAGAAAAAATTTAAACCGAAACGAAGAGGAAAAGAGCGTCATCTGAATAAAGAGCTCTTAAACAATAAAACTGGCTCTC
- Protein Sequence
- MRHQHIWSCAECFTFMHLPCIQHWVRDSLSSKHEKGIIPLWGCPKCRKEYREDQIPKKYTCFCGKTEDPPYQPWSIPHSCADICSKFLLPKCGHKCMLLCHPGPCPPCPKMVSVTCFCTKQSLCPRRCNAKEWSCGIVCNKKYKTCEHACVENCHPDPCPPCVKKVLTACNCNNKSELRKCNESFWQCNKVCGRRFSCNVHICENYCHKSGDCNTCPLERNRTCPCGKKRYAITCKQQQVPTCGDTCGKLLDCGAHYCNMRCHTERCGQCLEVVTKSCRCGSFSKELSCTKEFHCNKKCSQVRLCGRHLCNKKCCDCLINNTFKACEKVCDNTLNCRKHKCSAPCHSGPCYPCPRTIVIQCRCGNSKITVPCGTLKKIKPPNCNKMCKIPPICHHLKRESHKCHQGVCPPCRKTCKLTYKRCGHACQVVCHTKVWTKVKPNGVTKPIGPWENHKERWEYQSFPCPPCEVSVMVTCLGGHETMPWPCYKAVSTSCLRECGQLLMCTNHYCEKLCHKLNSLDGDDDDDDDDDNDDDNKCMECEKPCSFPRPKGCTHACPKLCHPIPCEPCKQLVKIYCHCGINTLYIRCVQLTSATTDRRSELLQCGNQCPQNYPCGHRCTNNCHPGLCQKAELCNKKVKMFCNCKRLKKDFSCNIVRAGKASVECDNLCQKRKEELHKIREFELEKKQKEEELKNLKEIEMFEKKFKPKRRGKERHLNKELLNNKTGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01190905;
- 90% Identity
- iTF_00286886;
- 80% Identity
- -