Ppup003092.1
Basic Information
- Insect
- Pteromalus puparum
- Gene Symbol
- grn
- Assembly
- GCA_012977825.2
- Location
- Scaffold:152775-183308[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-19 5.7e-16 57.8 4.7 1 35 425 458 425 459 0.98 2 2 8e-18 2e-14 52.8 5.6 1 35 482 515 482 516 0.97
Sequence Information
- Coding Sequence
- ATGGACATGAGCAGCGAATCGAGCGCGGCGCGCTGGTACGAGCCGCCGAGGAGCCTCGGCGAGCCCGGCTCAGCGGGCGGGGCCGGTGGTGGTGGCGCGGGTGGCGGTGGCGCCACTAGCGGCGGAGCAACACCAGCCAGCGCCGCAGCTGGCAACAACTCCGTCGGCAACCCCCAGGACTATAGGGGTTACTACACCCACGCGGCTCCCACCCACCACCCCGCCGCCCATTACGCGCACAGTAGGATGTCCAGCAGCGGGATGCCAGGCGGCCCCATAAGCCAGGTCTGCCGTCCGCACTTTGCCCCGTCGCTGCACCCCTGGGGCTTCCCCACGACGTCCGCCTCGACGAACGGCTCGTCCGAGGAGAAGCCCCAGAGCCCGCTGGGTTCGAGCATGGCTCCGGGCAGCACGGCCGCGAGTCTGGCCAGCCACGCGGGCGGACACCCCTTCCCCTTCCCGCCGACGCCGCCCAAGGACGCCACCCCCGACAGCATCACCGCCAGCAACACCTCCAGCGGGGCCAGCAACAACAACAACAACAACAACACGAGCAGCAACAACAACAACAACAACGGCCTGGGCCTGGGCTCGGGGAACGCGGCCGGCAGCGAGTACCAGGCGGCGGTGGCGCACGCGGCGGTCATGGGCGCGTTTATGCACCACCAGGACGCGCTCGGCTCCTCGGCCGCGGGCTCCTGCGACGTCAAGCCGTCCGTCATGCTCGGCGGTCACCACCAGCACGGCGCCCCATCGCCACCCCACCAGCACAACGCCGGAGGCCAACAGTCCCAGGGCGGCCAGGTCAAGCAGCGCGAAGGTAACCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGGCCAGCCAGCAACAAGACTACAGCCAGAGCAATCAGCAGCAGCAGCAGCAACAGCAGACGCCAAACTCGCCGTGTCGAGAGAGCTACTCGAACGCGCACCACAACTCGCAGTACGACCCGGCCGCCTCGGCCTACAACATGTACCAACACCTCCAGTATCCCAGCCATCACTCCCACAACCATCCCCCCGCGGCAGCTTCCCTCTTCTCCTCGGCGGCGAACCACCACGCGGCCGCTGCTGCAGCTGCGGCGGCTGTCGTGCCTGGTCTCGGCTCCGCCGACTCCTCCAAACTGTTAGGCTCGCATGTCGGCTCACAGAACACGCCCAACTCGCCCGGCTCCCAGCAACATCATCAACAGCAGCAGCAAAAGCCCAGGAACAAGTCCAGGACGTCCGCCGAAGGCCGCGAGTGCGTCAACTGTGGCGCGACGTCGACACCGCTCTGGCGACGAGACGGCACCGGTCACTACCTCTGCAACGCCTGCGGACTCTACTACAAGATGAACGGCCAGAATCGACCGCTGATCAAACCCAAGCGACGGCTGTCACTACAGAGCGCCGCGAGACGAGCGGGCACGAGCTGCGCGAACTGCAAGACGGCGACGACGACACTCTGGCGGAGGAACCAGGCCGGCGAGCCCGTCTGTAACGCCTGCGGCCTCTACTACAAACTCCACAACGTCAACCGGCCACTGACTATGAAGAAGGAGGGCATCCAGACGCGAAACAGGAAGCTCTCGTCGAAGAGCAAAAAGAAGAAGGCTGGAGGCTGCCTCGGACTCGGCGGTGTCATGGGCGACATGATCAAGGCCACCGGACACCTGGACCTCGACAACAAGCCCTTCCACTCCGGATTCGGATCGCCCATGAGCGACTATCGTACCTCGCAGCACCACCACACGATGCATCCGGCGATGCAGCACTACATGTACCACACGGGTGTCGGCGTGGGCGTCACCGGCTCGCTACACCAGGGCTTCGCGCCGCCGGCTCCGCCGCCGATTCACCCGCACTCCCACTCTCACTCGCACTCGCACCACATGACGAGTTTGCAGGGACTCCAGCTGGCCGCCACGACGAACGCAATG
- Protein Sequence
- MDMSSESSAARWYEPPRSLGEPGSAGGAGGGGAGGGGATSGGATPASAAAGNNSVGNPQDYRGYYTHAAPTHHPAAHYAHSRMSSSGMPGGPISQVCRPHFAPSLHPWGFPTTSASTNGSSEEKPQSPLGSSMAPGSTAASLASHAGGHPFPFPPTPPKDATPDSITASNTSSGASNNNNNNNTSSNNNNNNGLGLGSGNAAGSEYQAAVAHAAVMGAFMHHQDALGSSAAGSCDVKPSVMLGGHHQHGAPSPPHQHNAGGQQSQGGQVKQREGNQQQQQQQQQQQQASQQQDYSQSNQQQQQQQQTPNSPCRESYSNAHHNSQYDPAASAYNMYQHLQYPSHHSHNHPPAAASLFSSAANHHAAAAAAAAAVVPGLGSADSSKLLGSHVGSQNTPNSPGSQQHHQQQQQKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKATGHLDLDNKPFHSGFGSPMSDYRTSQHHHTMHPAMQHYMYHTGVGVGVTGSLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01037410; iTF_00305934;
- 90% Identity
- iTF_01037410;
- 80% Identity
- -