Basic Information

Insect: Pteromalus puparum
Gene Symbol: -
Assembly: GCA_012977825.2
Location: Scaffold:2822107-2825709[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.007 0.66 10.5 0.2 1 20 121 140 121 141 0.96

2 13 0.0084 0.79 10.3 4.6 2 23 259 281 259 281 0.91

3 13 1.7e-05 0.0016 18.7 1.1 2 23 340 362 339 362 0.95

4 13 5.9 5.5e+02 1.3 7.4 3 23 450 471 449 471 0.86

5 13 0.019 1.7 9.2 0.2 1 23 520 543 520 543 0.95

6 13 0.00044 0.041 14.3 0.0 3 23 592 613 591 613 0.90

7 13 0.00031 0.029 14.8 0.1 3 23 649 670 648 670 0.93

8 13 0.0067 0.63 10.6 3.7 2 23 714 736 713 736 0.96

9 13 0.023 2.2 8.9 2.7 3 23 751 772 749 772 0.94

10 13 5.2e-06 0.00048 20.4 0.2 2 23 817 839 817 839 0.96

11 13 6.6 6.2e+02 1.2 2.3 1 23 903 927 903 927 0.96

12 13 1.3e-05 0.0012 19.1 0.1 2 23 944 966 943 966 0.96

13 13 0.0094 0.88 10.1 0.5 1 23 1044 1067 1044 1067 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.007	0.66	10.5	0.2	1	20	121	140	121	141	0.96
2	13	0.0084	0.79	10.3	4.6	2	23	259	281	259	281	0.91
3	13	1.7e-05	0.0016	18.7	1.1	2	23	340	362	339	362	0.95
4	13	5.9	5.5e+02	1.3	7.4	3	23	450	471	449	471	0.86
5	13	0.019	1.7	9.2	0.2	1	23	520	543	520	543	0.95
6	13	0.00044	0.041	14.3	0.0	3	23	592	613	591	613	0.90
7	13	0.00031	0.029	14.8	0.1	3	23	649	670	648	670	0.93
8	13	0.0067	0.63	10.6	3.7	2	23	714	736	713	736	0.96
9	13	0.023	2.2	8.9	2.7	3	23	751	772	749	772	0.94
10	13	5.2e-06	0.00048	20.4	0.2	2	23	817	839	817	839	0.96
11	13	6.6	6.2e+02	1.2	2.3	1	23	903	927	903	927	0.96
12	13	1.3e-05	0.0012	19.1	0.1	2	23	944	966	943	966	0.96
13	13	0.0094	0.88	10.1	0.5	1	23	1044	1067	1044	1067	0.98

Sequence Information

Coding Sequence: ATGTCGTCCAGCCAAGAGACAACAACGACATGCCTACCGGCCGAGTCGACGACAGAGATCGATAGCGAGGGTTCGAGCTGTGAAGAACGAGGCGAGTCATCCCGGCGCCGGCTGCTGGGCGACCTCGAAGCCGGTATCCCTAAGAAGCGCCGGAAACAATCGACCCCCATCAAGTTCTCCACCACCAGTACGTCAGGTGACGTAATCCCCACCCCCGCAGATGTCGAGTCCGAAGATGAGGCCAGTGAGGAAGGTAAGCAGCCATCAAGCAACTCGCCGCACTCTAAGTCCATCCAGGGCCAGAATCAGCAGCTGCAGCATCAGCACGCGGCCGTCAAAGACGAGAACTTGAACAATGAGTTCCGCTGCCAGTACTGTAGTCAATTTTTCGGTAGTCGCGGTGCACTCGAGCTTCACCTCGAGTGCGAGCACGGATTCCAGCGCGAGACGCCGGCCTCCGCGAGGTCCAGTCCAGAAATGAGTAGCACTGCGCAGCCGTCGTCGGTCAGTCCGATTAACCTGTCGAGCATTAGCATTAGGAACTTTGCGACGAGCAGCGCTTGGCTCTCGGGGCAGAACCAGTTGCAACAGCAGGAGGCTTCTCTCGCGGCGACGGCAGCCAAGCTTCACGCCGCCGCTAGGAACAACAACCACTTTCAGCCGATTCCAGCCGGCTTCCCCTTCCTCTCCATGCCCGGCTTCCCCATGCCTGACTCTACGCAGATCCAGCGCGCGGCTATGGGCCCCTTTCCCAAGATCTTCAATCCCGACGCCTACTGCGACCTCTGCAACAAAGAGTTCTGCAACAAGTACTTTCTCAAGACGCACAAGGCCAACAAACACGGCATCTACGTCGACTCGCCGAGCAGTCAGTCATCCCAGGCCGGTGGTGACGGTACACCTTCGAATCCGTTCATTACTACATCCAGTCCCATTGCCGGCCTGCCTGGAAGCATGAGTCTCAAGGTCGTCGACCAGCAGAGACTCGAGAGCAACGGGATGCAGCAGCCGAGTATTCCCTGCGACATGTGCTCGAAACGCTTCAAGAGCGAGGACTCGCTGAGGAAGCACCGACAGAAGATCCATCTGAGCCAGAGCAACGAGTCCATGGACCCGTCCCAGCTTCAGATGAGCTTACCCTCGTCCTCCGGAGAGGAGGAGCGCCAGAGCCCCGGTGGCATGGAGACCCTCTTCAAGCAGGAGTATAGCATAGACCAGGAAGACTCGTCCTTCGCCTCCATCCCGAGAACCGCGAACATGTCGCCGCCATCCGCCCAGCAGATCAAGGACTCTGCGCTAAACGGCGACAGACTACGACGCCTGGGTGTCATGAACCCCGAGGCCTTCTGCGAGATCTGCTGCAAGGAGTACTGCAACAAGTACTTCCTGCGCACGCACAAGCTCAAGCGACACGGCATCTTCGTCCCCGAGACCGAGAAGTCGCCGAACCCACCAGCGGGTGCCGCCACCTGGCACCAGGTCCAGACCAGTCCGCTGAACCTCATCATGGCCGACGGCCTGGGCAACGGCTCAGAGTCCATGGATAGGACCGAGGAGTACGCCTGCAGGACCTGCGGGATACGTTTCCAGACTGAAGGACTGTATCGTCTGCACGTCGAGAAGATCCACGAGAGTGGAGAGCAGTCGTCGCCCAGACCCGAGCAGGAGCAGGACTCGACGGACCAGCGCACCGACTCCATCTCCGAAGACCTCCAGAAGCTGCAGACCATGATCCTGCAGCTGAACGGCCTCGAGTCGAACAAGGCCGCCTCCTGCGCCCTCTGCGGCAAGGACTACGATACACCTAGCGCTCTCAGGACCCACATGGTCGCCGAGCACGGCGTCGTCCCCGAGAACCTCACGGCGACGCCACCTCAGCAGCAGCAGCAGCAGCAGCAGCAACTGGCGAGGGAGAAATCTTCCCCCACTGCCGCCCAGGTCTTCTGCAGCATCTGCGACAGGGAGTACCCGAGCCAGGAGGCTCTGCGCAAGCACATCGCGGAGGACCACCAGCCGTCGACGCCCACCAGCTCCACGACTCCTCAACTTCCAACATCGGTACCCACGACTCCCAAGTCCAACGCCTCGTCCCAGCCGGAGACCCGCAAACCCACGGCCAACATCACGCCCACCTCCAGCTACTGCGAAATCTGCAACAAGGAGCTCTGCAACAAGTACTTCATGAAGACGCACATGCAGAAGATGCACGGCATCGAGATCGAGAACGGCGCCCAGATCGGCGGCGTCATCTGCAACATCTGTAAGAAGGAACTCTGCAGCAAGTACTTCCTCCGCGTTCACAAGCAGAACACCCACGGCATCGTAGAAGAGGGCGCCACTGCGGGCAAGCAGGAGAGTTTTGAACCGCCCGCCAACCCGGAGGACCTGGCTCTGAAACCCGAACAGCTGGGCGACCTCAGTCTGCGCTACATCACTCACTTCACGGAGGTCTGCCCCATATGCAACCGGCGATTCCGCAGCCCCAAGTGGCTGAAGGTCCATCTGCAGAGCGAGCACGGCAAGGCCGGCATGGACAAGTGGCGCGAGATCGAGCAATACCACCAGTCACTGCCCAAGACTCCTCTCAGGATACCCAACGGCTTCGAGCCCAACCAGCAGATCCGAGCCGATCTCGCGGCTCTGGGCAACCAGGTACTCTCCAACTTCTTCGGAGGTGGTGCCACTGATGACCAGCAGGCCCAGACCTACCGCTGCTCTCAGCTGCACTGCAACTTCTCCACCAACATCCTGCCGCTGTTCTTCCTGCACGAGCGGTCCCACAACCACCAGGACAACCCCTCGGCTGTCGACAGCGAGCGCATGCAGATCCAGTGTCCCATCTGCGCCCAGAGCTTCTCCCAGCCCGAGATGCTGCGCCAGCACATCGCTACAAGGCATCCGTTCCCAGGACTGCTCTCCCAGTTTCCCCTCCCGCTGCTCAACGACTTCAGCCTGGGTAACAACGAACAGCCCGGACAACAGCAGCAGCTCCAACTCCACGACTACGAGGCCAAGGAGGAGCTGCGCCAGCCCAGTCCCCAGATCATGAACGAGATCGACACGAACAAGATGAACAAGATCAAGCAGGAGGACCAGAACCAGGCGGTCCAGGTGATGCCCCAGGGCGCGTACAAGTGCGCCCAGTGCGGCTTCGCCACGGCCAACCTGAACCGCATCAAGAAGCACATCCGCAAGGATCACAAAAGCCTCGGCGACCCAGCCGAAACCGCCCTGGCCGAGCTCAGCAAGACCCTCAAGGACGTGGCCAACAAGCACAAAGTCCCGGCCAGCTATGCGATGCCTCAGGACGTGAACCTCACGCCCGACAAGACCATCATGCAACCCTTCATAATCGAGGAGCTCTGCAACGAGACTCCAACCCAGAACAACGGCAACAACGGCTGCACCAACGACGACAACAATCCCAGGCGGTTCGCCCCTGCCCTCGTGTTCCTACCGGTCAAGACGAGGGTCAGCGGCAGCCTCACCATGTCCTTCACGCTCAATCCTGCCTGA
Protein Sequence: MSSSQETTTTCLPAESTTEIDSEGSSCEERGESSRRRLLGDLEAGIPKKRRKQSTPIKFSTTSTSGDVIPTPADVESEDEASEEGKQPSSNSPHSKSIQGQNQQLQHQHAAVKDENLNNEFRCQYCSQFFGSRGALELHLECEHGFQRETPASARSSPEMSSTAQPSSVSPINLSSISIRNFATSSAWLSGQNQLQQQEASLAATAAKLHAAARNNNHFQPIPAGFPFLSMPGFPMPDSTQIQRAAMGPFPKIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDSPSSQSSQAGGDGTPSNPFITTSSPIAGLPGSMSLKVVDQQRLESNGMQQPSIPCDMCSKRFKSEDSLRKHRQKIHLSQSNESMDPSQLQMSLPSSSGEEERQSPGGMETLFKQEYSIDQEDSSFASIPRTANMSPPSAQQIKDSALNGDRLRRLGVMNPEAFCEICCKEYCNKYFLRTHKLKRHGIFVPETEKSPNPPAGAATWHQVQTSPLNLIMADGLGNGSESMDRTEEYACRTCGIRFQTEGLYRLHVEKIHESGEQSSPRPEQEQDSTDQRTDSISEDLQKLQTMILQLNGLESNKAASCALCGKDYDTPSALRTHMVAEHGVVPENLTATPPQQQQQQQQQLAREKSSPTAAQVFCSICDREYPSQEALRKHIAEDHQPSTPTSSTTPQLPTSVPTTPKSNASSQPETRKPTANITPTSSYCEICNKELCNKYFMKTHMQKMHGIEIENGAQIGGVICNICKKELCSKYFLRVHKQNTHGIVEEGATAGKQESFEPPANPEDLALKPEQLGDLSLRYITHFTEVCPICNRRFRSPKWLKVHLQSEHGKAGMDKWREIEQYHQSLPKTPLRIPNGFEPNQQIRADLAALGNQVLSNFFGGGATDDQQAQTYRCSQLHCNFSTNILPLFFLHERSHNHQDNPSAVDSERMQIQCPICAQSFSQPEMLRQHIATRHPFPGLLSQFPLPLLNDFSLGNNEQPGQQQQLQLHDYEAKEELRQPSPQIMNEIDTNKMNKIKQEDQNQAVQVMPQGAYKCAQCGFATANLNRIKKHIRKDHKSLGDPAETALAELSKTLKDVANKHKVPASYAMPQDVNLTPDKTIMQPFIIEELCNETPTQNNGNNGCTNDDNNPRRFAPALVFLPVKTRVSGSLTMSFTLNPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00287528;
90% Identity: -
80% Identity: -