Basic Information

Insect: Pteromalus puparum
Gene Symbol: -
Assembly: GCA_012977825.2
Location: Scaffold:260734-262308[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.013 1.2 9.7 5.1 2 23 147 168 146 168 0.92

2 10 7.5e-05 0.0071 16.7 2.1 1 23 271 293 271 293 0.98

3 10 1.6e-05 0.0015 18.8 0.7 1 23 299 321 299 321 0.95

4 10 6.5e-07 6.1e-05 23.2 2.1 1 23 327 349 327 349 0.98

5 10 0.0012 0.11 13.0 4.1 1 23 360 382 360 382 0.97

6 10 9.5e-07 8.9e-05 22.7 2.4 1 23 388 410 388 410 0.98

7 10 1.8e-08 1.7e-06 28.2 2.2 1 23 416 438 416 438 0.98

8 10 2.3e-07 2.2e-05 24.6 3.0 1 23 444 466 444 466 0.97

9 10 1.5e-06 0.00014 22.1 3.3 1 23 472 494 472 494 0.98

10 10 6.5e-06 0.00061 20.1 2.3 1 23 500 522 500 522 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.013	1.2	9.7	5.1	2	23	147	168	146	168	0.92
2	10	7.5e-05	0.0071	16.7	2.1	1	23	271	293	271	293	0.98
3	10	1.6e-05	0.0015	18.8	0.7	1	23	299	321	299	321	0.95
4	10	6.5e-07	6.1e-05	23.2	2.1	1	23	327	349	327	349	0.98
5	10	0.0012	0.11	13.0	4.1	1	23	360	382	360	382	0.97
6	10	9.5e-07	8.9e-05	22.7	2.4	1	23	388	410	388	410	0.98
7	10	1.8e-08	1.7e-06	28.2	2.2	1	23	416	438	416	438	0.98
8	10	2.3e-07	2.2e-05	24.6	3.0	1	23	444	466	444	466	0.97
9	10	1.5e-06	0.00014	22.1	3.3	1	23	472	494	472	494	0.98
10	10	6.5e-06	0.00061	20.1	2.3	1	23	500	522	500	522	0.98

Sequence Information

Coding Sequence: ATGTGCGATCGATGTGTGACAAGAGCAGAATCTGCGTTGCTCTTTAGAGAGCAGTGCCGAGCTGCGGATCAAGCTCTGAGACAAGCAGCTGTCAGAGTATCCAAGGATAGAGTACGGCAAAATGTTCTTCCTTGCAAAGCGTATCAGCAAACTCCCAGTTTTGTGCCATTTCAGTACTCCCAAGACAGATTGAAGGCAAGCGATTGTAGAGCTTTGGCAAATCATCAGGATCTGTATCTGCACAATCGACTGCATCCCCCATTTTATCAAGGAGAAGATAACATACCTCAGCATATGCACATTGTTGAGTCGCACAATAACTATCTAAATTTGAGCAGGTACAGTGGTGGTTCCATAAACCATGAAAGTGTGAGGCCAGATGACTTTGACCCAATTGCCAGGCATAATACAATACAAAATAGAGCATCTTGTGCATTGCAGTGTTCACTGTGTCACAGCACTTTCACCAATAGAACTCAGTTGGAGAATCACTGTATAACTCACAATTCAGATAATGTTGATATATCAAGCGATGAAGTTAATATTGAAGTTGAAGAAAACTCCAATCATCTTGAAAGGAATCACAGTTACGAGAGATCCATGAACCAGTCTGTGCAACAACCTACTGAAAATATTACGTACAATAAAATGAAACCAGATTGCCAAAATAGTTTTCAAGATCTTACGTTCTCAAACTCCATCAACAGAAAGTATTCCAACCAGGTGAGTGCAATCAGTACAACAGTCATTTCTCAGGAGCCAGAATCTATGGCGCGTACAGAGCCTCAAGAAATTTCCGAGAACAACAGATATAAGTGCGAGACGTGCTCCCGATTATTCAGTCAAAAATCCAAATTCTTAGCTCATCAAGTTACCCACGATAGAAAAAAGCCCTTTGAATGTATCGACTGTGGCAAGTCTTATTCTTCGAGAAGTAAACTCACGGCCCACTCAAGACTACACACGCAGACAAATGTTCATCGATGTAAGATCTGCCAAAAGATATTCTCCTATCCATCGTACTTGGCAGACCACATGAAATCCCACGACGCTAAACCAGTGAAAAGAACAGCATCCTTCGAGTGCGCACAGTGTAAGAAGCAATTTCAATTTGCCAAAAGCTACAAGCGGCACATGAAATTTCACATAGGCAAGGACTTGTTCCACTGCGACATCTGTGACAAACTGTTCAATCAGAAGTACGCGTTGAAGGCTCACATGAAGTCTCACGAGTCCGCCAAGTTTCATAAGTGCGATTTGTGTGACAAATCGTTCAATCAGAAAAGCAACCTCGTAGAGCACATGAGAATTCACACAAAAGTCAAGCCGTTCAAGTGCAAAACTTGCGGGAAGAGTTTTGCGCAGTCTAGTCATTTGAAGAGTCACGAGGCGTCGCACGATTCGGTTCGACAATTCCAATGCAGAATGTGTGGAAAACGATTCAAACTAGCGAGTCATTTGAAACGTCATGTCAACTTGCACACAGGCTTAAAAATGTACAAATGCGATCAATGCGAGCAGGTATTCTCTCAGGCATTCAGCTTGAAGCGCCATTCGAAAAAGCACTCGGAATGA
Protein Sequence: MCDRCVTRAESALLFREQCRAADQALRQAAVRVSKDRVRQNVLPCKAYQQTPSFVPFQYSQDRLKASDCRALANHQDLYLHNRLHPPFYQGEDNIPQHMHIVESHNNYLNLSRYSGGSINHESVRPDDFDPIARHNTIQNRASCALQCSLCHSTFTNRTQLENHCITHNSDNVDISSDEVNIEVEENSNHLERNHSYERSMNQSVQQPTENITYNKMKPDCQNSFQDLTFSNSINRKYSNQVSAISTTVISQEPESMARTEPQEISENNRYKCETCSRLFSQKSKFLAHQVTHDRKKPFECIDCGKSYSSRSKLTAHSRLHTQTNVHRCKICQKIFSYPSYLADHMKSHDAKPVKRTASFECAQCKKQFQFAKSYKRHMKFHIGKDLFHCDICDKLFNQKYALKAHMKSHESAKFHKCDLCDKSFNQKSNLVEHMRIHTKVKPFKCKTCGKSFAQSSHLKSHEASHDSVRQFQCRMCGKRFKLASHLKRHVNLHTGLKMYKCDQCEQVFSQAFSLKRHSKKHSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00144050;
90% Identity: iTF_00287495; iTF_00286662; iTF_01487245; iTF_01037263; iTF_01036468; iTF_01035676;
80% Identity: -