Basic Information

Insect: Pteromalus puparum
Gene Symbol: -
Assembly: GCA_012977825.2
Location: Scaffold:2157221-2162176[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.015 1.4 9.5 1.0 1 23 134 157 134 157 0.96

2 19 0.051 4.8 7.8 4.6 1 23 167 190 167 190 0.94

3 19 0.058 5.5 7.6 1.5 1 23 195 217 195 217 0.97

4 19 2.5e-05 0.0023 18.3 0.2 2 23 224 245 223 245 0.97

5 19 0.0037 0.35 11.4 0.1 1 23 251 273 251 273 0.96

6 19 0.23 22 5.8 0.5 1 23 282 304 282 304 0.97

7 19 0.00032 0.03 14.8 0.0 3 23 311 331 309 331 0.97

8 19 1.6e-06 0.00015 22.0 1.6 1 23 337 359 337 359 0.99

9 19 8.1e-05 0.0076 16.6 4.0 1 20 365 384 365 386 0.95

10 19 0.0021 0.2 12.2 1.1 1 20 487 506 487 507 0.95

11 19 0.0029 0.27 11.8 0.2 2 21 526 545 525 546 0.94

12 19 1.7e-06 0.00016 22.0 0.6 2 23 586 608 585 608 0.96

13 19 1.9 1.8e+02 2.9 0.2 2 23 613 635 612 635 0.90

14 19 0.002 0.19 12.3 0.9 3 23 643 663 642 663 0.96

15 19 4.7e-05 0.0044 17.4 4.4 1 23 670 693 670 693 0.94

16 19 0.2 19 6.0 2.0 1 23 702 724 702 724 0.98

17 19 0.028 2.6 8.7 0.9 2 23 731 751 730 751 0.97

18 19 0.00036 0.034 14.6 0.4 2 23 758 779 758 779 0.95

19 19 7.5e-06 0.0007 19.9 2.1 1 23 785 808 785 808 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.015	1.4	9.5	1.0	1	23	134	157	134	157	0.96
2	19	0.051	4.8	7.8	4.6	1	23	167	190	167	190	0.94
3	19	0.058	5.5	7.6	1.5	1	23	195	217	195	217	0.97
4	19	2.5e-05	0.0023	18.3	0.2	2	23	224	245	223	245	0.97
5	19	0.0037	0.35	11.4	0.1	1	23	251	273	251	273	0.96
6	19	0.23	22	5.8	0.5	1	23	282	304	282	304	0.97
7	19	0.00032	0.03	14.8	0.0	3	23	311	331	309	331	0.97
8	19	1.6e-06	0.00015	22.0	1.6	1	23	337	359	337	359	0.99
9	19	8.1e-05	0.0076	16.6	4.0	1	20	365	384	365	386	0.95
10	19	0.0021	0.2	12.2	1.1	1	20	487	506	487	507	0.95
11	19	0.0029	0.27	11.8	0.2	2	21	526	545	525	546	0.94
12	19	1.7e-06	0.00016	22.0	0.6	2	23	586	608	585	608	0.96
13	19	1.9	1.8e+02	2.9	0.2	2	23	613	635	612	635	0.90
14	19	0.002	0.19	12.3	0.9	3	23	643	663	642	663	0.96
15	19	4.7e-05	0.0044	17.4	4.4	1	23	670	693	670	693	0.94
16	19	0.2	19	6.0	2.0	1	23	702	724	702	724	0.98
17	19	0.028	2.6	8.7	0.9	2	23	731	751	730	751	0.97
18	19	0.00036	0.034	14.6	0.4	2	23	758	779	758	779	0.95
19	19	7.5e-06	0.0007	19.9	2.1	1	23	785	808	785	808	0.98

Sequence Information

Coding Sequence: ATGATAATAATCTCTCAAACACTAAGCGATAACGAACTGGTCTACTTCGAGGTGCTCAAGGAAGAAGAAGAAGACATCAACGAAGACGAAGTCGTAGGCGACGTCGTAGTCGAAGAAGAAGAGCAAGAAGAAGTAGAAGAAGAAGCCGAGGAAGACGAGATAGACGAGGCTCTTCAAATGGAAGATTTCGATCAGTACGAGGAAATCGACGGGGAAACGACCATAAACCCAGACAAGGTGATCCCCCAAGACCCAGACAACATCTGCGAGCAGTACGAGTACCTCGAAAACGAGGAACAACTTGCCGACCAGACTGACGATGTCACCGAGGAAGATCCCATAACCGAGCCTATACGCAGTCTCCTCGTTCGTATGGATTCTGGATCGTTGAAGAGACTGTACCAGTGCAGTCAGTGCGAACAGGTGTTTGCCACGGTAAAGCTCTGCGTGCGGCACATGTCGGTAGAACACCCCCGCGGACGCAAGTACCGTGTAGCCTACCGCTGCAAGACCTGCCAGAAGCTCTTCCGCACCAAGTATGGCTGCGAAAATCACATCCAGGGAAAACACAAGCACCGCACCTTCGAGTGCCGCTACTGCGGCTTTAAGACCGCCAGCATCACCTACATCAAGAAGCACGAGAGGAACCACGTGGACGACTTCGAGATCCGTTGCGACGTCTGCAACAAAGGCTTCGCCTCTAAGAACGTTCTCGAGAGGCACATGATCAGTCACACGGGAGAGAAGCCATTCGTTTGTAAGGAGTGTAATTCCGCTTACGCCGACAAGAGAAGCTTGATGCTCCACGCGACGGTGCACAATCCCGAGGGTAGGCCCAAAAAGTACACCTGTGAGGTGTGCGAGTACTCGAGCTTCTGGAAAAACGCGGTCAAGACGCATATGAAGATACACACAGGCGCCAAGGTCATCTGCGACGAGTGTGGACAGGCCGTGGCGAGTAACTACTATCTCAAGATCCACAAGAGGATTCACTCGGATGAAAAGCCGTTCACGTGTGATACTTGTAATAAAGGCTTCAGGCAGATGAAAAATCTTGTGGTGCATCAGAGGACGCATAGCAAGGTCAAGCCGTATAAGTGCGAGACTTGCAAGAAAAGCTTCTCACAGAACGTTTGGCTGAAAAAACACAAGTGTAATCCTGCAACAAAGCGAGCGAGAGGTTGTGTGCCACGGATCCTTCAGCGCAAGCGACAAGCAAATGATGCAACCTCCGATTCGGAGCAAGAGGTGTCACCGAAAATTCCTAGAATACGACTAGCTACAGCAATAGCCGCCACAAAAGTACCTGTGCAGCAATCGGTCTTGAAGAGTATCTTCGTCAAACCATTCGCTCATATAAAAGAAGTGTCAATATCGCCCTCACTGGATACTACTGAAGACTTGTCAAAGAACTCCGATCCGCTTACACTAAAAAAACGTATAGTTACTCGTGAGATCCACCAGTGCGATTCCTGCGACGAATCTTTCCATGATAGATCATCTCTAATAATTCATAAAACTGAAAAATCGATAGTTCGGACAAGGGAAGCACTACGCGAGCCTCAGGTCAAGGTCAGTTGTGAGATGTGCAATCGTCAGTTCATCTCCAAGGGTATGCTGGACCGACATTATAAGAACTGCGGCGTTGTCAGTACGGAAGATATGGCTGTGAAAGCTTATCGTCGTCGCAAACCTACTAAGCCGGCGAAGAAGAACAAAGAAAACGAAGGTACAAAGGAGGAGGAGGGCCCCATAACTTGTGATAAGTGTGGTAAGGTCTTCAAGAAAGAGAAATATTTGAAAGCCCACATGACGATGGCTCATGGCGAACACATTATGTGTCACTTCTGCGATGTGAAGCTCGACGCGGTGGCCCTCTTGAAAAGCCACATGACTGAAGAGCATAGCGGAGAATATACGGAATTCTGTTCGATATGCAACAAAGGATTCTTTTTGAGGCAATCGCTGAAGGTACACATGACTGCACATGCACGCGACGGTAAGCTGCACTACTGTGATATCTGCGGTAAAGGGTTCAGGCACAAAGTGTACCTTGAAAAGCACGTGCAACACGTACACGTGGAAATGCAGGACCGCAAGAAATATCAGTGTGACGTATGCTCTTACGAGACCCAGTACAAAAATGTTTTCAAAGAGCATATGTACAAGCACACCGGAGAGGACCTGGTACAGTGCGAAGTTTGCAACAAACGCATGCGGAGGTCGTACATGAAAATACATCTTAGGATACACTCGGGATATAAACCCGAGGTTTGTGAATTCTGCGGCAAAGCCTTCACGGCGAGAAAATACCTGTCAAAGCACAGAGTGGTGCACACTGGCGAGAAACCCTACCAATGTAGAGTGTGCGATAAGAGGTACACGCAAAAGGGTACCCTGACGTTGCATGTAAGAAAAAAGCATCAGCAACTTGACGTTGAAAACGGTGACGAGGTCGCTGAAGAAGAAGAGGAGGGGGAAATGGACCACGGTACTCTGGAACAGTTTGTCCAGGTCGGTGACGGTGCTGCACTGGAGCTCGCCAAAGAAAAAGACGTAGAGGAGAGTCAACTTATGGATGGTGAAGATAAAGAGGTCGTTGAGAACGAGCGCGACGTAATGCTTCAGGGTGACGAGGAAGGCGAGCTTATCGACGACGATGGCCAAGTCGTGTATGTGCAAGAATTCGCAGACGAGAAAGATAAAATCATGTATAACGTGACCAATAGAAGTGACAAGAATATCATTTGCGAGATGGAAAATGACCCGGATGTAGACGATGCTGAAGTGCTCGTAAGTGGCGTTGAAGAGATTGTGGAGGACATCGAGGAGGCGGATGAATCCGTTGAAAGAGGAATCAAATCTGAAGAGAGCGAGATAGAAGATGAAGACGTTATTTACGAAGAACCTGAGGACGAAAATGATGATCAAGTCGTAGAAAATGAGGCCGAAACAGCCAAGGATGATAGTACCTCAGATGAAAGTTTCAGATTAGAAATGTTGAGCGATAATGGTATCGAATACTTGGAAGAAGTTGTGGAAGAAAATTGA
Protein Sequence: MIIISQTLSDNELVYFEVLKEEEEDINEDEVVGDVVVEEEEQEEVEEEAEEDEIDEALQMEDFDQYEEIDGETTINPDKVIPQDPDNICEQYEYLENEEQLADQTDDVTEEDPITEPIRSLLVRMDSGSLKRLYQCSQCEQVFATVKLCVRHMSVEHPRGRKYRVAYRCKTCQKLFRTKYGCENHIQGKHKHRTFECRYCGFKTASITYIKKHERNHVDDFEIRCDVCNKGFASKNVLERHMISHTGEKPFVCKECNSAYADKRSLMLHATVHNPEGRPKKYTCEVCEYSSFWKNAVKTHMKIHTGAKVICDECGQAVASNYYLKIHKRIHSDEKPFTCDTCNKGFRQMKNLVVHQRTHSKVKPYKCETCKKSFSQNVWLKKHKCNPATKRARGCVPRILQRKRQANDATSDSEQEVSPKIPRIRLATAIAATKVPVQQSVLKSIFVKPFAHIKEVSISPSLDTTEDLSKNSDPLTLKKRIVTREIHQCDSCDESFHDRSSLIIHKTEKSIVRTREALREPQVKVSCEMCNRQFISKGMLDRHYKNCGVVSTEDMAVKAYRRRKPTKPAKKNKENEGTKEEEGPITCDKCGKVFKKEKYLKAHMTMAHGEHIMCHFCDVKLDAVALLKSHMTEEHSGEYTEFCSICNKGFFLRQSLKVHMTAHARDGKLHYCDICGKGFRHKVYLEKHVQHVHVEMQDRKKYQCDVCSYETQYKNVFKEHMYKHTGEDLVQCEVCNKRMRRSYMKIHLRIHSGYKPEVCEFCGKAFTARKYLSKHRVVHTGEKPYQCRVCDKRYTQKGTLTLHVRKKHQQLDVENGDEVAEEEEEGEMDHGTLEQFVQVGDGAALELAKEKDVEESQLMDGEDKEVVENERDVMLQGDEEGELIDDDGQVVYVQEFADEKDKIMYNVTNRSDKNIICEMENDPDVDDAEVLVSGVEEIVEDIEEADESVERGIKSEESEIEDEDVIYEEPEDENDDQVVENEAETAKDDSTSDESFRLEMLSDNGIEYLEEVVEEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -