Basic Information

Insect: Pteromalus puparum
Gene Symbol: -
Assembly: GCA_012977825.2
Location: Scaffold:2149725-2155204[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0027 0.25 11.8 3.5 1 23 55 77 55 77 0.97

2 28 3.7e-05 0.0035 17.7 2.7 1 23 83 105 83 105 0.98

3 28 1.5e-07 1.4e-05 25.2 0.1 1 23 111 133 111 133 0.98

4 28 0.00051 0.048 14.1 2.9 3 23 141 162 140 162 0.96

5 28 3.1e-06 0.00029 21.1 4.2 1 23 167 189 167 189 0.97

6 28 2.3e-06 0.00021 21.5 0.6 1 23 198 220 198 220 0.99

7 28 3.2e-06 0.0003 21.1 1.0 1 23 226 248 226 248 0.97

8 28 5.6e-05 0.0052 17.1 1.3 2 23 255 276 254 276 0.97

9 28 0.68 64 4.3 1.7 1 23 343 366 343 366 0.87

10 28 0.00024 0.022 15.2 3.0 1 23 378 400 378 400 0.97

11 28 5.7e-06 0.00053 20.3 5.5 1 23 424 446 424 446 0.98

12 28 0.00029 0.027 14.9 3.7 3 23 453 473 451 473 0.97

13 28 0.0013 0.12 12.8 0.0 1 23 478 500 478 500 0.98

14 28 2.8e-06 0.00026 21.2 1.3 1 23 508 530 508 530 0.98

15 28 0.08 7.5 7.2 2.4 1 23 536 559 536 559 0.94

16 28 0.00024 0.023 15.1 0.3 3 23 572 592 570 592 0.96

17 28 1.4e-06 0.00013 22.2 1.8 1 23 598 620 598 620 0.96

18 28 3.8e-08 3.6e-06 27.1 0.2 1 23 626 648 626 648 0.98

19 28 2.8e-07 2.6e-05 24.4 0.9 1 23 654 676 654 676 0.98

20 28 0.00063 0.059 13.8 1.7 1 21 682 702 682 703 0.96

21 28 0.012 1.1 9.8 0.8 2 23 752 774 752 774 0.95

22 28 0.002 0.19 12.2 1.6 1 23 778 800 778 800 0.99

23 28 0.0026 0.24 11.9 2.9 1 23 806 829 806 829 0.94

24 28 5.5e-06 0.00051 20.3 1.9 1 23 836 859 836 859 0.96

25 28 2.8e-05 0.0027 18.1 1.8 1 23 891 913 891 913 0.98

26 28 1.3e-05 0.0012 19.1 0.3 1 23 917 939 917 939 0.98

27 28 0.00064 0.06 13.8 0.8 3 23 945 965 943 965 0.96

28 28 2.7e-06 0.00025 21.3 2.3 1 23 971 993 971 993 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0027	0.25	11.8	3.5	1	23	55	77	55	77	0.97
2	28	3.7e-05	0.0035	17.7	2.7	1	23	83	105	83	105	0.98
3	28	1.5e-07	1.4e-05	25.2	0.1	1	23	111	133	111	133	0.98
4	28	0.00051	0.048	14.1	2.9	3	23	141	162	140	162	0.96
5	28	3.1e-06	0.00029	21.1	4.2	1	23	167	189	167	189	0.97
6	28	2.3e-06	0.00021	21.5	0.6	1	23	198	220	198	220	0.99
7	28	3.2e-06	0.0003	21.1	1.0	1	23	226	248	226	248	0.97
8	28	5.6e-05	0.0052	17.1	1.3	2	23	255	276	254	276	0.97
9	28	0.68	64	4.3	1.7	1	23	343	366	343	366	0.87
10	28	0.00024	0.022	15.2	3.0	1	23	378	400	378	400	0.97
11	28	5.7e-06	0.00053	20.3	5.5	1	23	424	446	424	446	0.98
12	28	0.00029	0.027	14.9	3.7	3	23	453	473	451	473	0.97
13	28	0.0013	0.12	12.8	0.0	1	23	478	500	478	500	0.98
14	28	2.8e-06	0.00026	21.2	1.3	1	23	508	530	508	530	0.98
15	28	0.08	7.5	7.2	2.4	1	23	536	559	536	559	0.94
16	28	0.00024	0.023	15.1	0.3	3	23	572	592	570	592	0.96
17	28	1.4e-06	0.00013	22.2	1.8	1	23	598	620	598	620	0.96
18	28	3.8e-08	3.6e-06	27.1	0.2	1	23	626	648	626	648	0.98
19	28	2.8e-07	2.6e-05	24.4	0.9	1	23	654	676	654	676	0.98
20	28	0.00063	0.059	13.8	1.7	1	21	682	702	682	703	0.96
21	28	0.012	1.1	9.8	0.8	2	23	752	774	752	774	0.95
22	28	0.002	0.19	12.2	1.6	1	23	778	800	778	800	0.99
23	28	0.0026	0.24	11.9	2.9	1	23	806	829	806	829	0.94
24	28	5.5e-06	0.00051	20.3	1.9	1	23	836	859	836	859	0.96
25	28	2.8e-05	0.0027	18.1	1.8	1	23	891	913	891	913	0.98
26	28	1.3e-05	0.0012	19.1	0.3	1	23	917	939	917	939	0.98
27	28	0.00064	0.06	13.8	0.8	3	23	945	965	943	965	0.96
28	28	2.7e-06	0.00025	21.3	2.3	1	23	971	993	971	993	0.99

Sequence Information

Coding Sequence: ATGATATATTACTTATTCTTAATTTCAATGTCCATTCTGGAGGAAAGGAATTCTCTGAGCCTAGCTAAGATAAACAACGAAACTGAAAAGGAAACTGTGACCCTTAATCTACCCCAAAAACTCGCCGAAGAAGACAAACTCGACGGAGACGACCAAGAAGGCTACCAGTGTCAGCTCTGCTCGAAGTGTTTTAAGTCTAAGAACCTCTACGACGGCCATCTGATATCCCACAGCGATGCTCGGCCTCATCAATGCAACATCTGCCTCAAGTCTTTCAAGCGCACTAATACCTTGGCGGTTCACCGCCGTATCCACACCCGTGAGCGGAACTTCGTCTGCGACGTCTGTGGTCGAGCTTTCGTCCAGGCCTCCCAACTAGCTACACACCAGCGGCGGCACTCCGACCGGTTCACGCGACACTGCGATCTCTGCGACAAAGGATTCTTCACCAACGCCGAGCTGCACAGCCACATGAACGTCAAACATGCAGCTAATCAACACGTCTGTGATACCTGTGGTAAATCTTTCCCGAACAATCACTCGCTGACAAGACATTCTAGAAGCCACGATCCGGATTTTGAACCAGCGAAGTATCAATGCGAGTTCTGCGGCAAGACTTTCGCTTACCGAAATTCTCTAGTAGCACACGTCAAGTCCCATACCGGGGAGAACAAGTACGACTGCCATCTCTGTGGAAAAAGCGTGTCATCAAAGGGATCGCTGCAGGACCATCTCAGACTACACGGTGGAGAAAAGAACCTGGTGTGCGACGTCTGCGGAAAGGCTTTTCACAAGAGGACGACACTCGTCGTGCATAAGAGGACGCATACGGGTGAAAAGCCATTCGCATATCCCGAGCATAATAACCCGCAGATGATCTCGGACGGCAAGAGCGCCTCTCCAGACCATACGAGCGTAATCACAAAAAAGAAGCAACAGATGCGAAAGCTCGAGGTCCAGTCACCTGTCGTCAAAATCGAGGATACTCACAGCAGCTTCGAGCTCGATGACGACCTGCCTTTGGCCTATTTCTGCAAGCCCTGTAATACCTTCTTTGCCTCTCAGGACCTCTTGGACTCACACAACTTCAGTTTTCATCAAGAGGAGGAGGCTTCGGCCAAGAAAAAAAGGTACGATTGCGCGCACTGCGGGAAAGTGTGCCGAACCGCCCTCAGTCTTCGTCAGCACGCCAAGCGCCACAAAAGTGACGACATAAAGGGCGAGGAGAAGGAGAAAGTTGAACAGCAGCAGCAGCAGGAGGAGGACGATTTCACCTGTAAGACCTGCGGTAAGGTCTTTCAACACAAGAGCAGCTATCAGAAACATCTGATGCGGCACACAGTGGGTGATCTTGCTTGTAAGCACTGTCCCAAGAAGTTCCGACTCTTCCGTGATCTTACTCGCCACGAGAAGACGCACTTCCTTCCCAGCTACGTCTGCAAAGAGTGCGACTACGAGACGACGGTCCTGGCTGCTTTAAGCATTCACATGGCGAGGCACACCGACAAAGCCGAGCTGCCATTCAAGTGCCAGGAGTGTGACAAGAGATTCAGGAAGGCCAACGAACTGCAGGAGCACTACAATATACACTCGGGCGACAAGCCCTTCGTTTGCCAGACCTGTAACCAGGCGTTCTTCCTTCGCAGACAGCTAGCAGCCCACTGTAGGAGACTGCACCCGGAGCTCAAGGCGCAGAAGGTCACCAGCACTGCCTGTGATATCTGCGGTAGGGTCCTGGCCACCAAGCGCTCGTTGTTCAGACACAAGGAGAGCCATAACCCAACGAAGCTTTACCTCTGTGATTACTGTGGTAAAAGTCTCAGCAGTGCTGAACATTTGAAGAAGCACAGAAGGATCCACACAGGAGAAAAGCCCTACGTGTGCGACATCTGTGGCAAGGGATTTACCGACTCGGAAAATCTCAGAATGCACAGGAGGATCCATACCGGGGAGAAACCGTACAAGTGCGATCAGTGTCCGAAAGCTTTCAGTCAGAGGTCCACGTTGACGATACACAGGAGAGGACACACTGGGGAGAGACCTTACGTCTGCCAGATTTGCCATCGAGGATTTTCCTGTCAGGGAAATCTCACGGCTCATCAGAAGTCCACAATCACTCGCCGAAACGGGCATGCTAAAGGCACTTCAAATGGCAGACAAGATCAAAAAGCAGAAAAGACGTCAAACGGTAGAGTACGTCGTCGCCCCACTTGGCTGAAGGACAGCGTAACAGACTTTGATAGTCTGCGAAACACCTGCCCTTTCTGTGAGAAGCGCTTCAAGGACGACAAACGCGTTGAGAATCACGTGCGCAACGTTCACCGCAAGCCCTTCAAGTGCGATTTGTGCCGGCGCCAGTACTTCACTGTAGAAACACTCGAGGCCCATCGCAAGACTCACAACACCAATTCGCATTTCGAGTGTCCTGTCTGCCACATGAAGTACAAACGCGAAGAGACACTGCATAGTCACTACGTGCGAGTGCACAGTGACCTCAAGGCGACCTTCACGTGCGATCATTGCGGTAAAACTTTCAAGCTCAAACAGGACCTGATGCTGCACATCAACCAGGTGCACATGAGCAGCTACCAGATCTGCCGGTTTTGCGGCAAGAACGTGAAAAACGTCAAAACTCATGAGTGGCATCATCAAAAAGCTTCCAAAGAGATATTTCCATGCAGCCTTTGCTTCAAGAAGTTCCGAAGCGAGAGCAAGCTAGAGAACCATCTCATGAGACACGTAGCACGTTACGAGTGTAACATTTGCAATGAGACCTTCTCTGGTCCTGGACAGTTGATGAATCATAAGACCAAGCACAAGCCTGGAGTCAATTGCGTCTATTGCTACAAGTACTTTAGCTCTCGGAGCAACTATTATCAGCACGTCCTCATGCACGCCAAGATACGGCCTTACAAGTGTGACATCTGCAAGCAGGACTTTACTCAGAGATCCACATTAGTGAGACACAGGAAGATGCATCCAGACAGTGATCAAAATCCGATTATCGTGGTGCCCATAGCTGACATGGCTAGAAAGGTACTTGAAAGCCTTAAGGATGTTGAGGACGATTGA
Protein Sequence: MIYYLFLISMSILEERNSLSLAKINNETEKETVTLNLPQKLAEEDKLDGDDQEGYQCQLCSKCFKSKNLYDGHLISHSDARPHQCNICLKSFKRTNTLAVHRRIHTRERNFVCDVCGRAFVQASQLATHQRRHSDRFTRHCDLCDKGFFTNAELHSHMNVKHAANQHVCDTCGKSFPNNHSLTRHSRSHDPDFEPAKYQCEFCGKTFAYRNSLVAHVKSHTGENKYDCHLCGKSVSSKGSLQDHLRLHGGEKNLVCDVCGKAFHKRTTLVVHKRTHTGEKPFAYPEHNNPQMISDGKSASPDHTSVITKKKQQMRKLEVQSPVVKIEDTHSSFELDDDLPLAYFCKPCNTFFASQDLLDSHNFSFHQEEEASAKKKRYDCAHCGKVCRTALSLRQHAKRHKSDDIKGEEKEKVEQQQQQEEDDFTCKTCGKVFQHKSSYQKHLMRHTVGDLACKHCPKKFRLFRDLTRHEKTHFLPSYVCKECDYETTVLAALSIHMARHTDKAELPFKCQECDKRFRKANELQEHYNIHSGDKPFVCQTCNQAFFLRRQLAAHCRRLHPELKAQKVTSTACDICGRVLATKRSLFRHKESHNPTKLYLCDYCGKSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRIHTGEKPYKCDQCPKAFSQRSTLTIHRRGHTGERPYVCQICHRGFSCQGNLTAHQKSTITRRNGHAKGTSNGRQDQKAEKTSNGRVRRRPTWLKDSVTDFDSLRNTCPFCEKRFKDDKRVENHVRNVHRKPFKCDLCRRQYFTVETLEAHRKTHNTNSHFECPVCHMKYKREETLHSHYVRVHSDLKATFTCDHCGKTFKLKQDLMLHINQVHMSSYQICRFCGKNVKNVKTHEWHHQKASKEIFPCSLCFKKFRSESKLENHLMRHVARYECNICNETFSGPGQLMNHKTKHKPGVNCVYCYKYFSSRSNYYQHVLMHAKIRPYKCDICKQDFTQRSTLVRHRKMHPDSDQNPIIVVPIADMARKVLESLKDVEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -