Ppup009502.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pteromalus puparum
Gene Symbol
ZNF236
Assembly
GCA_012977825.2
Location
Scaffold:4576183-4590992[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 5.6e-06 0.00052 20.3 1.0 1 23 182 204 182 204 0.98
2 26 0.00015 0.014 15.8 1.6 1 23 210 232 210 232 0.97
3 26 5e-06 0.00047 20.4 0.3 2 23 238 259 238 259 0.98
4 26 0.0014 0.13 12.8 0.7 1 23 265 287 265 287 0.97
5 26 0.00078 0.073 13.5 2.1 2 23 298 319 297 319 0.97
6 26 2.6e-06 0.00025 21.3 0.7 1 23 340 362 340 362 0.99
7 26 0.00016 0.015 15.7 0.9 1 20 368 387 368 390 0.96
8 26 9.8e-06 0.00092 19.5 0.3 1 23 396 419 396 419 0.97
9 26 0.00014 0.013 15.9 2.0 1 23 428 451 428 451 0.98
10 26 5.7e-08 5.4e-06 26.6 1.0 1 23 562 584 562 584 0.99
11 26 4.7e-05 0.0044 17.4 2.9 1 23 590 612 590 612 0.97
12 26 0.0004 0.037 14.5 0.9 1 23 618 640 618 640 0.95
13 26 0.013 1.2 9.7 1.8 1 23 644 667 644 667 0.97
14 26 8.6e-05 0.0081 16.6 3.8 1 23 728 750 728 750 0.98
15 26 2.1e-08 2e-06 27.9 0.3 1 23 756 778 756 778 0.98
16 26 0.00017 0.016 15.6 3.4 1 23 784 806 784 806 0.98
17 26 0.00021 0.02 15.3 5.7 1 23 812 834 812 834 0.97
18 26 0.011 1.1 9.9 2.9 1 23 1154 1176 1154 1176 0.94
19 26 0.0012 0.11 12.9 2.5 1 23 1182 1204 1182 1204 0.97
20 26 2.2e-08 2.1e-06 27.8 1.2 2 23 1239 1260 1238 1260 0.98
21 26 6.1e-05 0.0057 17.0 2.7 1 23 1266 1288 1266 1288 0.99
22 26 5.6e-06 0.00052 20.3 1.1 3 23 1296 1316 1294 1316 0.98
23 26 0.00042 0.04 14.4 2.4 1 23 1322 1344 1322 1344 0.98
24 26 7.8e-07 7.3e-05 23.0 0.8 1 23 1537 1559 1537 1559 0.98
25 26 5.1e-08 4.8e-06 26.7 2.2 1 23 1565 1587 1565 1587 0.99
26 26 2.2e-07 2e-05 24.7 2.5 1 23 1593 1616 1593 1616 0.98

Sequence Information

Coding Sequence
ATGGAGGACATGGGATTTATGAATATGCTCACTGATGATGGCACTACATTAGTGTCTGTACACCAGAGAGATGATGGAAGTTTGGAACTCGTAACAACACCAGTGACAATCATACAGGATGCGTGCAATGGCCCTGTGCAGGAGCTCAATGCTACCAATGCAGAGTTTATTTTTAATCAGATTAAGATCAACAATGCTCTTCCACAAATTATTGAGCAACCCAACATAACTTCCATTGATGTGATAAATTTGAATTCTCAAATTGTACAAGTGGCCAGTGATCAGCAGAGTTGTATTTCAGAAGTATCTAATAATTTATTACCTGATAATGTACAACAAATATCAAATGTAGAAAATAGCACAGCAAGTACTGCGGATGTAGCTGTAGAAAGAGAAGAGGAAGAAGTACAAAATGAATCTCTAGAAAAATCACAAGAATCCCAGAGTCCTAAAAAAAACTCTTCACCTTTTAAACAGCATAGCCATAAGAGTCTCGGTAGACCAAAAAAGCATAGCAAAAATGCTAATGGAGTGACAGTATATTTCAAGTGCGACATCTGTGGTATGGGATTCCGGAAACAGTACTTGATGCAAAAACACATGCAAGAACACGCACAAGAGAAACCACATCACTGTCCAAAATGTCCTGCATCATTTAATGTCCCAACAAATTTCACTTTGCACATGGCGACACACAACATAGGTGAGCCAAAATGCCCACAGTGTGGACGAAGATTTGCACGCATGGCCAGTCTCAAGGCTCATATGACGGTGCATGAGGTGGATGAGAATCACTATTGCACCGAGTGTGAAAGTGTCTTTGAAACAAAGGCTCAGTTGGACGCACACTTGAAGCTTCACAACGAGAAATGGTCAACGGACGACTACAAGCGTTGCAAGCTCTGCCGCAAGCAGTTTACTCAACCCGTCCTCTATCGTCAGCATTTACGCGATCACTACAAAATGCAGACCAAGTGCCCGAAACAGACGAAGCGCGGGGTCACGATCGGCACCATTTACAAGTGCAGACTGTGCCTCAAGTCCTTCGAAAAACCCAGTCAACTGGCCAGGCACATCAGGGTACACACCGGCGAAAAGCCTTACAAGTGCAATCTATGCAGCCGAAGCTTTTCGCAAAAAGGCTCCGTGAGGATTCACATGTGGCAGCATAATGGCATCAGGCCTTACAGCTGTTCCATTTGCAAGGCTAAATTCAGTCAAAAAGGCAACTTGAACGCACACGTGTTGCGAGTACACAAGATCCAGGAAGGCGCGCCGATCTACCGCTGCACGCGCTGTCCTTGTGTCTTCAAGAAGCTCGGCAGTCTCAACGGCCACATGAGACGAGCGCACGCCGGTGTCGACGATGGGACCACCGAGGAAACCGCCGAGGAGGTTCAGGAAATTCAGGAGACGACCGTCTACCCCGCCAGCAATGACGTAGAAACGCCGTCGGAGACGGAACCGAGTGCGGAGACGGAACCGAGTGTGGAGACGGAACCGAGTGCGGAGATGGAACCGAGTGCGGAGACGACGGAACTGCCGAAGGACGTTGAGGACGGTTTCATTCTTACAGATGATAAGGGGCAGACGGCCCTCGTTACGCTTTTGGATAAGGTTGCCAATGATGCTAAGGGGAAGTACATTAAGTTAAAGCAGCGATTTGTAAATAACTGTATACAGTACGAATGCGATTTCTGTGATAAAACGTTCAAGAAGCCATCCGACCTCATGAGGCATTTGAGGGTACACACGCGAGAAAGGCCTTTCAAGTGCAAGACGTGCGATCGATCGTTTACCCTCAAGTCTACTTTAATGACGCACGAGAAGCTTCACGAGAATGCTGGAAAGTACAAGTGCCAAAACTGCGACATGACTTTCAATACGGAAAATGCTCTCAGAGCTCACGACAAAACCCACAACAAAGTTCACAAATGCATGATCTGCGTAAAGGCCTTCTCAAGCTTCGAGCGTTTGCGGGAGCACTCCATGACTTTGCACATGGGCCGCAAGGTCCCGTCGAGCCGTCAGAAAACACAACTGCCATCGGAAGTGCTGAACCTAGCGCCCAAAGTCGTGTTGAAGGAGCCGCTTGTCTTGACCGAGCTTAGCAGCGGTATGCTTCACGCCCAGCCAAAGTTCGCGAGGACCAGCAAGCTGGCCCATATTAAGGGAAGGCCCCACAAGTGCCAGACCTGCCCGGCCGCTTTTACTAAGCTCAGTCATCTCAAACAGCATGTTCGGATGCATACCGGGGAACGACCGTTCGTCTGCCCTATTTGCGACAGGAGTTTCACGACCAACGGTGCTCTTAAAGCGCATCGTCGAACACACGATATGTTAAAACCCTACCAGTGTACAATATGTAGCATGAATTTTTCTACATTAAGTAGTATGAAGAGGCATCATGTTACACACAGCAATAAAAGGCCATTTATGTGTCCGTACTGCAATAAAACCTTCAAAACAACGGTAAACTGTAAAAAGCATATGAAACTGCATAAACAAGAAATCGCGCAACAGCAAATAGAGAGCGAGAAGAAACAGCAACAGCAGTCCTCAAATTCGAATGCAACAGAAACAATTCCGCCGACAGATTCAACCACTACTAATAATCAACAAATCACTTTTAAGCCTATAACAACTGACATAACGCAGAACTTGAATGAACAACTTCAAATAATGAACAAGAACAATAATTCTCCTGAATCGAATTCTGCGCTATCCCAAAATATTCACGTGTCTTGTCATCAAGGAAAGAATATATCCGTAGTAGAAAACTCTAACATAGGTTCGACCCAAACATTGCATGCCGATGAGACAGGCACTATTACCCTATCTAACTATACGGGTGACCCGACACTTACACCTGAGAGTATTAGAGTAATAGAGGAGACTCTGAATCAACAGTTATCCAATATCGGATTAAACATGGCACTTAACAGCAGCGTTAGGCAGATCGAGGAACATAATAATACCTCCACAGTAAATCGGGATCAACCAACTTTGAGCATTATTTATGATAAAACTGTGGCATCTCCTATGAATACAAATACCATGAGTACAAATGTTTTTTCTCCCCAATTCGAAAGTTTTGATATCAATCAAATTACTCTACAGGGTGACAATGACATTGATTTAGGAATAATACAAAATAATTCGGCACACACGACGAACATTTTACCGAATATGTTACATCAAAATCAAAATTACAGTTTGCAATTTGTCAATAATGATCTTTACATGAATACAATTCTCAAACAAAGCCAAGTAAATCAGTTAAAAGATAATGATCAATTGAATGAATCAATGAAAGTTGTAACAACTGATCAAGTTTGTGGTAATGCCAATAAATCTACGGACAAAGAAAATAATCTACAGTGCCATTTATGCAACATGCAAGAATTAAGTGTTGACGACTTGAAGGAACATCTTAAAACTCATCAAGAGCCTAAGGAATTTGAGTGCATCCAATGTCTTACAAAATTTCATACTAGTGCAGGCCTTAAGAGACATATGAAAACTCACGAGACACAGGAGACTCATAAATGCTACGAATGCAATCAAGAATTTTCCACGACGTTACAGCTTAGAGAACATATTAAAGAGCATGTCAAACACGAATTAAAACTCAAAAATGTAGTGGATGCTGATTCTATGCCTAATAATATTAAAAAAGGAAAAAACAAAGACAATACTGCCAATAAGGATAACCAATGCAAATACTGCCCAAAGACCTTTCGAAAACCCAGTGATCTCATAAGGCATATTAGAACGCATACCGGTGAGCGACCATATCAGTGCCAATATTGCGATAAGAGCTTTGCTGTTAAGTGCACATTGGATTCCCATTTAAAAGTGCATAAAGGCGATAAATTGTTTGGTTGCAATGTGTGCAATACCATGTTTACAACAAAGAGCAGTCTTAAAGTTCATTTACGACTCCATACAGGAGATAAACCATTCAAGTGTTCGATTTGTGACATGCAGTTTCGCACCTCTGGCCACCGCAAAGCTCATGAGATGTCCCACACGCGAGAAAGTAAACCCGTAGACCAGCCAACTTTGATTGACGGAAGTTTGGATTCAGTAAATACCATAGAGTCAGCAGAATCAGCGAACGACACCCGAATCGTGCAGATCGTACACACAGTTCCTGTTCATCAACAATTAGAACAACAAAACGCGAATTCCTTTAATTTCAATCCCAACAACGTTACGATAAATCCACAACAAGTAAGCTTCAGTATGGATGATGGATCGAGCCTGTTGAGTTTGAACGAAAACAATCAGTTGGTGGCGAATCTTGAATTTTTACTGGCTAACGGCTTGGTCAATATATCATCTGAAGGTCTGCAGTTGTCTGACGATTATATCGGACAGAAGATGCAGGAACAGCCAGATGATGCTGGTTCACAAGTGATCTTTGCGAGCGAATTGCCGGTCACGGATGTACAAATAGAACAAGAGTTGCATCCAAATGCGAGTAACATTGATATGGAAAACTGCATGGTTCTACCGCTGGATAACTTTAATTCTATTTTGGAAGAGAGAAATGTCGAGGACGGACTAAAAGAGGATGATAGCCCAAGCATGACGGGACCACGCTACGACTGTGAAATTTGTGGTAAATCATTCTCCAAACCTTGTCAGGTCGAGCGGCACATACGCGTACACACTGGTGAACGTCCATTTCAGTGTGAAATTTGTAACAAATCGTTCTCCCAGAAATCGTCGCTGCAGTTGCATCAAAAAAGTCACACCGGCGAACGGCCTTACAGCTGTCCACATTGTGATCAATCGTTTACTCAAAGCGGCAACCTCCAGACCCATGTGCGTCGCAAGCACAAGCTTGAGTCTGAAAAACGCCAACAGTTTGTCAATGTTAATTACTATGATCCGAGTAAAATTCTAGCGTCGGAACAGCAGCAACTTATGTTTAATAGGCCGATCGGATTTGAGGATATGTCTATCGTTGAGTTGCTTAATTGA
Protein Sequence
MEDMGFMNMLTDDGTTLVSVHQRDDGSLELVTTPVTIIQDACNGPVQELNATNAEFIFNQIKINNALPQIIEQPNITSIDVINLNSQIVQVASDQQSCISEVSNNLLPDNVQQISNVENSTASTADVAVEREEEEVQNESLEKSQESQSPKKNSSPFKQHSHKSLGRPKKHSKNANGVTVYFKCDICGMGFRKQYLMQKHMQEHAQEKPHHCPKCPASFNVPTNFTLHMATHNIGEPKCPQCGRRFARMASLKAHMTVHEVDENHYCTECESVFETKAQLDAHLKLHNEKWSTDDYKRCKLCRKQFTQPVLYRQHLRDHYKMQTKCPKQTKRGVTIGTIYKCRLCLKSFEKPSQLARHIRVHTGEKPYKCNLCSRSFSQKGSVRIHMWQHNGIRPYSCSICKAKFSQKGNLNAHVLRVHKIQEGAPIYRCTRCPCVFKKLGSLNGHMRRAHAGVDDGTTEETAEEVQEIQETTVYPASNDVETPSETEPSAETEPSVETEPSAEMEPSAETTELPKDVEDGFILTDDKGQTALVTLLDKVANDAKGKYIKLKQRFVNNCIQYECDFCDKTFKKPSDLMRHLRVHTRERPFKCKTCDRSFTLKSTLMTHEKLHENAGKYKCQNCDMTFNTENALRAHDKTHNKVHKCMICVKAFSSFERLREHSMTLHMGRKVPSSRQKTQLPSEVLNLAPKVVLKEPLVLTELSSGMLHAQPKFARTSKLAHIKGRPHKCQTCPAAFTKLSHLKQHVRMHTGERPFVCPICDRSFTTNGALKAHRRTHDMLKPYQCTICSMNFSTLSSMKRHHVTHSNKRPFMCPYCNKTFKTTVNCKKHMKLHKQEIAQQQIESEKKQQQQSSNSNATETIPPTDSTTTNNQQITFKPITTDITQNLNEQLQIMNKNNNSPESNSALSQNIHVSCHQGKNISVVENSNIGSTQTLHADETGTITLSNYTGDPTLTPESIRVIEETLNQQLSNIGLNMALNSSVRQIEEHNNTSTVNRDQPTLSIIYDKTVASPMNTNTMSTNVFSPQFESFDINQITLQGDNDIDLGIIQNNSAHTTNILPNMLHQNQNYSLQFVNNDLYMNTILKQSQVNQLKDNDQLNESMKVVTTDQVCGNANKSTDKENNLQCHLCNMQELSVDDLKEHLKTHQEPKEFECIQCLTKFHTSAGLKRHMKTHETQETHKCYECNQEFSTTLQLREHIKEHVKHELKLKNVVDADSMPNNIKKGKNKDNTANKDNQCKYCPKTFRKPSDLIRHIRTHTGERPYQCQYCDKSFAVKCTLDSHLKVHKGDKLFGCNVCNTMFTTKSSLKVHLRLHTGDKPFKCSICDMQFRTSGHRKAHEMSHTRESKPVDQPTLIDGSLDSVNTIESAESANDTRIVQIVHTVPVHQQLEQQNANSFNFNPNNVTINPQQVSFSMDDGSSLLSLNENNQLVANLEFLLANGLVNISSEGLQLSDDYIGQKMQEQPDDAGSQVIFASELPVTDVQIEQELHPNASNIDMENCMVLPLDNFNSILEERNVEDGLKEDDSPSMTGPRYDCEICGKSFSKPCQVERHIRVHTGERPFQCEICNKSFSQKSSLQLHQKSHTGERPYSCPHCDQSFTQSGNLQTHVRRKHKLESEKRQQFVNVNYYDPSKILASEQQQLMFNRPIGFEDMSIVELLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00286637;
90% Identity
iTF_01036451;
80% Identity
-