Ppup010135.1
Basic Information
- Insect
- Pteromalus puparum
- Gene Symbol
- -
- Assembly
- GCA_012977825.2
- Location
- Scaffold:53397-55437[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-07 0.0003 20.4 0.0 1 37 15 52 15 55 0.87 2 2 0.74 7.7e+02 -0.1 0.0 14 22 140 147 136 160 0.77
Sequence Information
- Coding Sequence
- ATGGTGCGGAATTATAAAAGAAAGACGGACAGAAAAATTTGGACTCATGGACAACTGCACTTGGCAATACAAAATGTGGTCGCACAAGGCAAGTCATGCAAGAGTATCGCCCAAAAATTTGGAATTCCACGGTCTACTCTGCAAAGGAAAATTAAACAATTTTCTGATCAGCAAGAAGTTTTTAATTTACAAGAAGACAATACTAAATGGAAAGGTTATGAACGCACTTTCACTGAGGAGCAAGAAGAGGCTTTGGCAAGAATTATTGAAGACATGGAAAGCAAATTATTAGGACTTAGTGGGCTTGACGTACGAAGGATTGCCTTTGAATTTGCTCAAAAATTGAACATTACTCACCGATTCAATTTTGAAAAAGAAGAAGCAGGCAAAGATTGGCTCCGTGGTTTCATGACTAGACATGGAATGTCACTAAGAAAAGCTGAGCACACATCTTCTGCCAGAGCTTATGGTTTTAATAAACAAGCTGTTCAAGAATTTTTTGTGCTTCTAAAAAAATTGTTAGACCAATATAACTTTACTCCAGACAGAATATACAATGTGGACGAAACAGGTGTGTCTGTTGTACCAAAGTCATCACCAAAGTTCGTCTCAAGAAGAGGACGAAGACAAGTTGGTGGATTGACTGCTGGTGAGAGAGGTGAGAATGTAACCGCAGAGATTTGCATGTCAGCATCAGGTATTTTTATGCCTCCGATGTTGATATTCCCTCGAGTCAAAGAAAACTTGGAATTACTGTATGGTGCACCGCCTGGAGCTTGGGCAGAATATCACAAAAGTGGTTACATGCAGACAGATATATTCACACGATGGTTTGAGAAGTTTATTGAATTCTCTCATGCGACACCAGCCAATCCAGTTTTACTACTCCTTGATGGACATGTAACGCACATAAGAAATATGAAAGTGCTCGAGCTTGCAAAAAGCAATGGTGTAGAAATATTGTGTTTCCCTCCTCATTGTACACACAAAATGCAGCAACTTGATGTGGGTTTTAATGGTCCACTTAATATCAACTTTGGCAGAGAAGTTTCATACTTCCAGCGACAGGGTAATCGTGTCACACTAAAGAACTTGTATTCTATATTTGGCAAGGCCTTTCTTGAATCTGCTAAGATGGAGACTGCTATCAATGCATTTCGACGATGTGGAATTTACCCTTTTAATTCAGAAATATTTTCTGACTCAGAATTTGCTGCTTCAAAAGGTGCAATAACTTCACATTTATCACAGTCAAGAAGCGAAGAGTCAGAGGCAAGAATTGAGGGCTACAAAGATGTTATTCGTGACATAATGAATTCCAAACAAGAACCACCTTCAACGAAAGCTCTACTTTCTACGCAAACACATGATTCAAAGAAAGGCCAATCTTCTACGAGTGCACACAGTTCAACGACAGAACAGCAAAAACAAAGCCCTTATAAAGTTGAGAACTGCAAAACTTCTACACTTAGACAACATTCAGAAAATACTAGTCACAATGTAACAGATGGTGAAATCCGGATACCTTTAAATTACCTGGCCCAAGCAATGCCTCTCATCAATTTATTGAGTTCTGCCTACTATAAATCAACTGGTAAATTATCGGAAGAGGTAACTATCAATAGTGCTGACAATAAACTGCATGAATTGTTAACGAGCACACCTCTCTCTACTGGAAAAGATCCATCTGTTTCACCTAGTCAAGAGAACATGGCATCTCCTTCGACCACAAGTCTATTCACATCAAATGCATCAGATGGAACAGCTTCAAAAAAAGGTAAAACAAAAGGAAAAGCAGCTATTATTACCGGTGATGGGTATCAAGAGAATTTAATGGCTGAAAATATAAGAAATATAAAAAAAGAAAAAGATGAAAAAGAAAAGATGTGA
- Protein Sequence
- MVRNYKRKTDRKIWTHGQLHLAIQNVVAQGKSCKSIAQKFGIPRSTLQRKIKQFSDQQEVFNLQEDNTKWKGYERTFTEEQEEALARIIEDMESKLLGLSGLDVRRIAFEFAQKLNITHRFNFEKEEAGKDWLRGFMTRHGMSLRKAEHTSSARAYGFNKQAVQEFFVLLKKLLDQYNFTPDRIYNVDETGVSVVPKSSPKFVSRRGRRQVGGLTAGERGENVTAEICMSASGIFMPPMLIFPRVKENLELLYGAPPGAWAEYHKSGYMQTDIFTRWFEKFIEFSHATPANPVLLLLDGHVTHIRNMKVLELAKSNGVEILCFPPHCTHKMQQLDVGFNGPLNINFGREVSYFQRQGNRVTLKNLYSIFGKAFLESAKMETAINAFRRCGIYPFNSEIFSDSEFAASKGAITSHLSQSRSEESEARIEGYKDVIRDIMNSKQEPPSTKALLSTQTHDSKKGQSSTSAHSSTTEQQKQSPYKVENCKTSTLRQHSENTSHNVTDGEIRIPLNYLAQAMPLINLLSSAYYKSTGKLSEEVTINSADNKLHELLTSTPLSTGKDPSVSPSQENMASPSTTSLFTSNASDGTASKKGKTKGKAAIITGDGYQENLMAENIRNIKKEKDEKEKM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -