Ppup004718.1
Basic Information
- Insect
- Pteromalus puparum
- Gene Symbol
- -
- Assembly
- GCA_012977825.2
- Location
- Scaffold:7473525-7476337[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-09 3.8e-06 26.5 0.0 5 38 56 88 54 94 0.88
Sequence Information
- Coding Sequence
- ATGGCTCGTAAAAAAAAGGTTACCAAGAAGAAAGTTGCAACTAAGAGTCCAAGCAAAGAATCAACTATAGTTAATGTGAATGTAAAGTTAAAAAAGAAGAATGTTGTTATAGTTAATAATACTGAAAAGGTGAAAGTAAAGAGAAAATGTTATTCTGTGAATAGCCTTCAGAATGCCCTTGATGCACTCGACACTGGTCTTTCTATTCGAAAAGCTGCAAAGGCGTATGGAATTCCAGTAGCTACCTTAGCTCGTAAGAAAAAAAATCCTGTTATGCTGAACAAAAAAAGTGGAGCAAGTACTATTTTATTGCACGAAGAAGAGGAAAACATAGTTAAGTGGATCGTGTACAGGGCAGAAAGAGGTTTCCCAGTGACGAAGAATGAACTTTTAGATAATATACAGAAGTTTATCATCCTCAAGAAAAGAACGACACCCTTCATTAATAATCGTCCAGGTCGTCACTGGTATGAGGGATTCAGGAGACGACACCCTAATATAACAGTCAGAACTGCACAGCATTTAAGTTTGAGTCGAGCTGGTGTTACACCTGATGATCTCAAAGAGTGGTTTGGTGATCAAAAGAAGTTTTTAATAAGTAAAAATCTTATTGATATTTCTCCTACACGAGTTTTCAACTGCGACGAGAGCAATATTTTACTATGTCCTGACTCGGATAAAGTTTTGACACGAAGAGGTGCTGCTGCAGCGTATAAGATTACAGATGGTGGCAAGGAAGGCATTACTACTTTGTTCATGTATAGTGCAGCAGGTACACGTGCTCCCCCAATGGTGATGTTTGCATATAAAGAAAATATACCAAAGAAGATTATCGACAACATGCCAAAGGGTTGGGGCATTGGAATATCAGAAAGTGGGTGGATGACTACGGAGACCTTCTATGAATACATAACAAATGTATTCTACCCATGGCTGATTAAAGAAAAGATAGAGTTTCCAGTAGTCATTTATTTGGATAATCACTCATCGCACATCAACTTCCCTCTTGTCACCTTTTGTCGACTCAAGCAAATTGAGATAATCGGTTTATATCCCAATTCGACCCATATAATGCAACCACTGGACATTTCATTTTTTCATCCTTTCAAGATAGCATGGAAGAAAACTGTAGTAAAGTGGAAGAATGATAAGAATGTGCTAAAACTTAAAAAAGAAAATTTTCCAGCAGTTTTGAAACTTACACTAGATGAAATGAAAGAAGAAAAGAAAGCTATAATTAGTGGATTTGCAGGAGCTGGTCTGTTGCCATTTGATGTAAATGCCATAGATTATGATATTCTTGTGAAAAACAAAAAAAAGAAACGCACTTGTAGTGTACATGATGACTCCGTAATAATGGACCAGCTATCTAAGACTACGAGCCATGAGGATATGGAGCAACACTTAAAGAATTTTGAAAGCAACATATCATCTGCACTATTAGAACAGTTCAACGATGCTGTAACAAATGGATTGTGGACCGGAGAAACTGAAAATAAAGCTCTTTTTGAGTATTGGCTTAAAATTAGCAAAAAATCTCTTGATGCTATTGATAGTTTAAATGCTAAACCTCAAGTGAAAAGCATAGAAACTTTAGCCACAAAAGTTAGACTAGTAATACCCGAAACTCAAGAGCTTTCTAACATACAATTAACGGACGACGATATTATATTGCCATGGGATAACGCTATCAGTGATGAAAATTTAGTTGAAAGAACCGAAGACAATGGTATACCAGTAGTCGACATTACAAATATACAAAAATTGCCACATAACTTGGACATCACAAATAATATTATATTAGACGCATCAAACTTAAATGAAAGCGAATTTTCATCAACTGAAGAAGGAGCGGAGTCACCAAAAGTTGCTCAAGTCGAATCTAGTATAAAAGTTGGAGCAGACATTGAAAAGATGCAGAGTGCAGCCATTGATTCTATGGATTCCGCAGAAATTTCCAATGTCGCATCTGACTCTCAAGGAAATGGGGAATCTCTAACCGAAGGAGAAAGTCTGACGCAAACAGTTGCTCAAGATAAAGAAAATGCTGCTGCCATTGCTAACCAAGAGCCTGCAATTGTCCAAGATGAAACTTTTTCAACGGTATTTACATTACCTACAAAATATTTGCCAAAGAAAAAACGATTCAAATTAGAGGCATCCGGAAAACCTAAAGTGCCAGCAGCAGCAACGAGTGATGCATGGTATAATATGGAGCTGGAAAAGCAACGAAGGCAAAAAGAAAAAGAAGAGCAGCTTGCAAGAAAAAAGGAACTACAAAATCAAAAAAAAGCAATAGCTGAAGAAAAGAAGAAGTTAAACGCAAAGATGAAAGAATTGCAACTAAAGATTAAGCAAGAAAAAAAATAA
- Protein Sequence
- MARKKKVTKKKVATKSPSKESTIVNVNVKLKKKNVVIVNNTEKVKVKRKCYSVNSLQNALDALDTGLSIRKAAKAYGIPVATLARKKKNPVMLNKKSGASTILLHEEEENIVKWIVYRAERGFPVTKNELLDNIQKFIILKKRTTPFINNRPGRHWYEGFRRRHPNITVRTAQHLSLSRAGVTPDDLKEWFGDQKKFLISKNLIDISPTRVFNCDESNILLCPDSDKVLTRRGAAAAYKITDGGKEGITTLFMYSAAGTRAPPMVMFAYKENIPKKIIDNMPKGWGIGISESGWMTTETFYEYITNVFYPWLIKEKIEFPVVIYLDNHSSHINFPLVTFCRLKQIEIIGLYPNSTHIMQPLDISFFHPFKIAWKKTVVKWKNDKNVLKLKKENFPAVLKLTLDEMKEEKKAIISGFAGAGLLPFDVNAIDYDILVKNKKKKRTCSVHDDSVIMDQLSKTTSHEDMEQHLKNFESNISSALLEQFNDAVTNGLWTGETENKALFEYWLKISKKSLDAIDSLNAKPQVKSIETLATKVRLVIPETQELSNIQLTDDDIILPWDNAISDENLVERTEDNGIPVVDITNIQKLPHNLDITNNIILDASNLNESEFSSTEEGAESPKVAQVESSIKVGADIEKMQSAAIDSMDSAEISNVASDSQGNGESLTEGESLTQTVAQDKENAAAIANQEPAIVQDETFSTVFTLPTKYLPKKKRFKLEASGKPKVPAAATSDAWYNMELEKQRRQKEKEEQLARKKELQNQKKAIAEEKKKLNAKMKELQLKIKQEKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00287135; iTF_00287133; iTF_00287134;
- 90% Identity
- iTF_00287133;
- 80% Identity
- -