Ppup000595.1
Basic Information
- Insect
- Pteromalus puparum
- Gene Symbol
- bab1
- Assembly
- GCA_012977825.2
- Location
- Scaffold:893697-905728[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.1e-12 9.4e-09 34.8 0.0 1 35 40 75 40 81 0.92 2 3 3.1e-05 0.032 13.9 0.0 24 43 180 200 180 202 0.93 3 3 2.4 2.5e+03 -1.7 0.3 6 13 279 286 275 295 0.79
Sequence Information
- Coding Sequence
- ATGCGGCGTAAAATGTGGGCCAAGCTGTTGGAGTCGTCCCACGCTTGGCTCGGAGCCTCCACCTCCAGTATAGCAGCTGACTACTCGAGCCTGCTGAAGCTGAAGGCACCGACGTGGACGCGACAAGAGCTGCAGGAGGCCATCGAGGCCGTGGTCACGCAGAAGATGCGCTTCACCCAAGCCTCGAGCAAGTACGGCATACCCAAGGGCACACTCTACGACAACATCCTCGGCAAATCCAAGCGGATGATGGTACTCGAGGAAGCTGGTCTCGAGCCAGCCGAGGAGACAGCCGTACTCGAGTTCTGCTGCGACATCAGCGTCAGTCCTTACAATCGCAGGACGAAAAAGTCTCTGCAAGCTATCCTCGGCTTCGTTGAGAAGCTCAGGCGGCAGCGAGAGCCAAACTTTGCGTTCACCGGACTCTCGGGCTTCCGTTGGTGGTGGGCCTTCTGCAAAAAACACGGCATCGTCTCGCTCTACTTCAACGACGAGAACGACAACGATCACTCCGGCAGAAATCCTAATGCCAGGCCAAGGAAATACGATATTCCCTACCCGACGTTTGTACTTTACGCGAACCGAGTTCACAATATGCTCGGGCCGAGCGCCGACGGTGGAGCTGATCTGCGGCCAAAGGGACGAGGGAGACCGCAGAGGATCCTGCTCGGCGTTTGGCCGGACGAGCACATCCGCGGCGTGATTCGCGCGGTGGTCTTCCGCGACGGGCACTCGCCTCATATCGTCAAGGAAGAGCCAGCCACCATGTATCCCGCCTTGGCGAATTACGGCGCCTGCAACGGACCCGAGGGAGCAGTCAGCCCCAGTGCGGCTGCCGCCGCGGTCGCCGCCGTCGCTCAAGATGAGACAAACAATATTTCTGTGGAAGAAATGAAGAAAGATTAA
- Protein Sequence
- MRRKMWAKLLESSHAWLGASTSSIAADYSSLLKLKAPTWTRQELQEAIEAVVTQKMRFTQASSKYGIPKGTLYDNILGKSKRMMVLEEAGLEPAEETAVLEFCCDISVSPYNRRTKKSLQAILGFVEKLRRQREPNFAFTGLSGFRWWWAFCKKHGIVSLYFNDENDNDHSGRNPNARPRKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPATMYPALANYGACNGPEGAVSPSAAAAAVAAVAQDETNNISVEEMKKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -