Basic Information

Gene Symbol
Ubp1
Assembly
GCA_012977825.2
Location
Scaffold:1570389-1597131[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-63 4e-59 199.6 0.0 15 221 300 497 285 499 0.89

Sequence Information

Coding Sequence
ATGGAGCTGCAGCTCATCATGGACGCCGGCTCCGAGAGTCTCGGCGGCACGATGTGGCTCACAAACTCGCTGTCACCTACCTACCAGGAGCTATCGCCCGGTAGGCCGAGCGACGGCGACCCCATCGTTGGACAACAGGCGTCCCTTGGCTTTCACCACCAAGACCCGTCAAGCAACGGCAGCGGTAACATCCTCTGGCAGGACAAGCAGCTGTCCTCGTCGCCCAGGTCATCGCCCGAACACCAGTCAAGTCTGCACCAGCAGCATCATCACCATCATCGACACCATCAGTCCCCGGATTCGCCGCTAAGCAATTCGAGCAGCACCAATTGCAGCAGCAGTGGACAATCTCCCGAGCACAAGCTCTCACTCGGGTTGACCAGTCTTCAAACGGTCCAGCCGCAGCAGCAACAGCAGCCAGCGCTGAAACGACGAGCCGACGAGCCGCAGACCTACCAGCAATCCCAGCAGCAGGTCGGCGAACCCGAGAGGAAGCTCTTGCGCAGAAACGGAAGCAATGGCTCACAAGGATGGTCAACGCAGGTCGAGGAGATCGCCGAACACCTGGCCGCCGATTTCGACGGTTCGCTGTCGGCCCTCGCGGCCTCCGATCTCGCGACCGCCGTTGCTTCTTATAACATGAGCGAAGCTCTGCTGGCCTTGCCCTCGCTCACGGTTTTCAAGCAAGAAGCGCCATCGCCTGATAATCAACACAACAACACGACCTTAAATCACGTGTCTCAAAGGAATGTCAATGCTCCGCCGACAAGCAATGGAAACGGCGGTCTTGTCGAGGCGGACAGCAATAACAACGGCCAGAATCCAGCGAGCCTTCATCAGCTGCTCTACACGTCGAACGACGAATATCCGCCAAACTCCAACTCCGGCAATCACGTGTCTTCCTCCCAACAGGGAAATGATTTCAACGAGGATTGTCGCTTCCAGTACGTTTTGGCCGCAGCGACTAGCATTGCTACCAAGGTCAACGAGGAAACTCTAACATACCTCAACCAAGGACAATCATACGAGATAAAACTGAAGAAGCTTGGTGATCTTACAGCTTTACGTGGAAAAATCTTAAAGTCGACAATACGTATCTGTTTCCACGAGCGCCGGCTCCAGTATACTGAGCGCGAGCAGATTCTAGCATGGCAACGGGCCAGACCGGGCGAGCGTTTGCTTGAAGTCGACGTGCCCCTTAGCTACGGCATGGTCGACGTCTGTCAGTCCTCGCCATCTAACAACAGCGTCGAGTTCATGTGGGACCCTACCAAAGAGGTCGGCTGTTATGTGAAGATCAACTGCATTAGTACGGAGTTCACCCCCAAGAAACACGGCGGCGAAAAAGGCGTGCCGTTCCGTATCCAAGTGGAGACTCGGCTACCTGGAGGACCGCGGCTTCACGCCGCTTCTTGCCAGGTCAAAGTTTTCAAGCTCAAGGGTGCTGATCGCAAACACAAGCAGGACCGTGATAAGATACAGCGCAGACCACCTCACGAGCAGGACAAATACCAGCCTAGCTACGAGTGTACTGTGCTTTCAGATATACCTCTAGACTCACTTTCGTCGTCTAACTCGATCATCCAGAATGTTGGCAGCCCCTACGCTCCGACCGATGCTATATCACCGCAGAGCCGAGCAGCCATAAGCGGCAGTTCCTCGCCCGTAGCAGCGCCTCTAGCCCTGTCAACTAATCCGAGCATAGTAGTGCCTATAGTCCCCGCACCGGAGACCATCAAAGAGGATATCGGGGCAACCCCGGCCCTGCCCTCTCCTGCTGCAATTCTACCTGAACAGAATTGCACTGACATCAGCGTACCGCCTTGCCTTAACGAGTTACCAGCCGACGCAAATGCCGCGCAAACGAGCAGCTGGCTTCGATCCCGGCGCTTCCACGCTTTCGAGTCGACCTTCGCCAGCTTCTCGGCCTCTGACATCCTGCGACTATCACGCGATGACCTCATCCAGATCTGCGGCCTTGCCGATGGCATCAGGCTTTTCAATGCATTGCATGCTAAGGCGCCACAGCCGAAGCTCAGCCTCTACTTCGCCGTAGAAGCTGGTAACGGTGCCGGCGGCGGCGTCTGGCGAGCCGTCTACCTCGAGAGCCTTACCAGCGGTACGCTCACAAGCAAACTCTTGGCTGCCTTGAATCTGCCGCACGAGAGACTGCACTCGGTCATGGTACTTGGACCGCAGGGCATACATGTGCTCGTCACCAATGAGCTCATCGCTAATATGAAGGACGAGAGCATGTTCATCGTGGAGACTATCAAGGGTGGGTTGAGCTCGCATTTATTTCCTTTTAAAATTATTAAAATTTTGTTGGAAGTCTAA
Protein Sequence
MELQLIMDAGSESLGGTMWLTNSLSPTYQELSPGRPSDGDPIVGQQASLGFHHQDPSSNGSGNILWQDKQLSSSPRSSPEHQSSLHQQHHHHHRHHQSPDSPLSNSSSTNCSSSGQSPEHKLSLGLTSLQTVQPQQQQQPALKRRADEPQTYQQSQQQVGEPERKLLRRNGSNGSQGWSTQVEEIAEHLAADFDGSLSALAASDLATAVASYNMSEALLALPSLTVFKQEAPSPDNQHNNTTLNHVSQRNVNAPPTSNGNGGLVEADSNNNGQNPASLHQLLYTSNDEYPPNSNSGNHVSSSQQGNDFNEDCRFQYVLAAATSIATKVNEETLTYLNQGQSYEIKLKKLGDLTALRGKILKSTIRICFHERRLQYTEREQILAWQRARPGERLLEVDVPLSYGMVDVCQSSPSNNSVEFMWDPTKEVGCYVKINCISTEFTPKKHGGEKGVPFRIQVETRLPGGPRLHAASCQVKVFKLKGADRKHKQDRDKIQRRPPHEQDKYQPSYECTVLSDIPLDSLSSSNSIIQNVGSPYAPTDAISPQSRAAISGSSSPVAAPLALSTNPSIVVPIVPAPETIKEDIGATPALPSPAAILPEQNCTDISVPPCLNELPADANAAQTSSWLRSRRFHAFESTFASFSASDILRLSRDDLIQICGLADGIRLFNALHAKAPQPKLSLYFAVEAGNGAGGGVWRAVYLESLTSGTLTSKLLAALNLPHERLHSVMVLGPQGIHVLVTNELIANMKDESMFIVETIKGGLSSHLFPFKIIKILLEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01035205;
90% Identity
-
80% Identity
-