Basic Information

Insect: Psyttalia lounsburyi
Gene Symbol: -
Assembly: GCA_030522865.1
Location: JAPYZN010006757.1:1572-6884[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.27 45 5.7 0.2 2 20 429 447 428 449 0.89

2 11 0.0007 0.12 13.9 0.8 2 23 479 500 478 500 0.95

3 11 0.4 67 5.2 1.1 3 22 598 617 596 617 0.95

4 11 0.047 7.9 8.1 0.7 3 23 635 655 633 655 0.96

5 11 0.0076 1.3 10.6 0.2 1 21 729 749 729 750 0.97

6 11 1.4 2.3e+02 3.5 0.0 2 16 927 941 926 943 0.90

7 11 0.0013 0.22 13.0 0.1 1 23 967 989 967 989 0.97

8 11 0.45 75 5.1 0.5 1 20 994 1013 994 1015 0.94

9 11 0.0033 0.55 11.8 0.4 3 20 1034 1051 1032 1055 0.88

10 11 0.42 71 5.1 0.3 1 23 1673 1697 1673 1697 0.92

11 11 0.29 49 5.6 0.1 1 23 1707 1732 1707 1732 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.27	45	5.7	0.2	2	20	429	447	428	449	0.89
2	11	0.0007	0.12	13.9	0.8	2	23	479	500	478	500	0.95
3	11	0.4	67	5.2	1.1	3	22	598	617	596	617	0.95
4	11	0.047	7.9	8.1	0.7	3	23	635	655	633	655	0.96
5	11	0.0076	1.3	10.6	0.2	1	21	729	749	729	750	0.97
6	11	1.4	2.3e+02	3.5	0.0	2	16	927	941	926	943	0.90
7	11	0.0013	0.22	13.0	0.1	1	23	967	989	967	989	0.97
8	11	0.45	75	5.1	0.5	1	20	994	1013	994	1015	0.94
9	11	0.0033	0.55	11.8	0.4	3	20	1034	1051	1032	1055	0.88
10	11	0.42	71	5.1	0.3	1	23	1673	1697	1673	1697	0.92
11	11	0.29	49	5.6	0.1	1	23	1707	1732	1707	1732	0.95

Sequence Information

Coding Sequence: ATGGACAAGGAGAACATGGAGAAGTGTCGTCGTGTGTCGGTGGTGCTAACACCCCTGAAGAGCTCCGAAATAAAAAGATGGAAAAACCAAAGAAAATCTCATAAAAAGCGGAAAAATCGTTGGCAGAAGGGCTATGTGAAGCCTCTGAAGCATCCAGTGAGAAAGTTATCGGTGTCCTCATCGAATATCCAGGAAAATTCCAGGGATGATGCTGATATAAGGACACCAGTGACTCTACTCTCTGATGATCCTCCGCCTGCTGACATCAGAAACGCTGATGTCAGCAATGCTGATGAAACGAAAGAGCTGAGCGTTCCTGGTGGTGACGACGAGGCCCTCACACTCTGGAAGTACAAGAGAAAACGAGCGAGCATTTCGTCGGATTCTGGTGGCGAGGAGCCAGCCCCCAAACGAGTCACAGATCCCGAAGTCACTCCTAAGAAATTGACGATCAATCTATCTAGACTGGCGGTCCAAATGCCATCTCGAGGAGTTCTGCTGGATGACGAGAGTGAAGTGGAGGCTGACAGTGTCGAGGATGCTGCCAGTTTGATAATGGACAGCTGTGAGGACAGCGCTGACAGGGCTCAAGGGGGCCAGGGTCTGAGGCAGAAGCCTCGAGAGTCCGACGCCAGTGATGAGGAGGGAGTCAAGGAAAGCGAGAGAATTATTGAGAGTGCCAGTCAGAATTCCGAGCCAGAGAGTGTCAACATGACTGAAGCACTCTCTGACGATGAGAACGAGTCTGATAATGACGAGGAGCTGATGGATTTGTGCCTCATGAAGGAGCCAACAGTTCTCGTGACCAAACTGGAGGATGTCATCGAGGCACTCGAGCACAATCGCTATTTTCCTGATCGACAACACTTGACTGACAGGTATCTGGATATTATCAGGAGATTCACGAGTCAGGAGGACTCTGAGGACTCTTACTATCTCATCATGTCACCGGATTCTAAGAGCTCACATTCTAGTGGTgatgatgacgatgatgatgatgaattATTTACTACTAATCGTTTCTCTGGAAGATTGAGAAACAGGAGAAGAATCTCAAGTGATATGAGCTCTTGCTCTGATGTTGATCCACTGCGGAATGGGGAGAACGAGGACTCATCAGGAGCTCAGGGCTTGACTGTGATTGAAAAGTCCGGGACTTCGGCTGGTGCTCCTGGAGAGAAGGGCCCCAATGTCTCAGAGGCTTCCGCATGTTCCAATATTCCAGCTGTTAATGAAGAGGATGACACCTCCAACTCGCCAGAGACAGTTCTGAGTACTCCGCTGTCCTGCGAGGAGTGCAAAGAGACATTTGCAACTGTAGGTGGAGTACTGAAGCACACGTGCGAGCCTACCTCCCCGAATAAGGGTAAATCCAAGGGTAAAGCTTTGAAGACGAAGAAACACCCCAAATTAACGCCCAAATCTACTAGTCTTGAGTGCACTCTATGCTCTCAGACTTTCGAGAATCACGGACTTCTGCAGAGGCACTTGTTGGCTCACTCGGCTAGCGATCACGAGAAGGCTTTCAAAGCTGCCAAACGTCAGTCTCGAAGTAAGCAATCGCAACCGGAGGTCGAAGTCCTGAGCTCAATTGATTCAGACAAATCAGATACAGAGGACAAGTCAGACACTGAGAGAACTGCGCTCAATGAGCCAGGAATTGCCATAATGAATGAGAAATCAGCCACAGGAAACAGCAAGAAAACCTCAGTTCCAGTTGCCATTTGTCCTTGTCACGTGGACGATCTAAAACCCACTGATCTCACAGTGCAGATCGAAATGGTTCTCTTCTGCGAAATCTGCAAAGTTTTATTCAGAAGGAGCGAGTGCATTGAGACCCACTACAGAACAAATGCTCTCTGCAATAAAGACAGGAGAAAGGGAAGATCACCTAGACTGTTTTGCAGCACCTGCAGAGTTGTCCTGAGTAATCTGTCGGATATGAGGAAACACCTCGAGAAACATGTCAGCATAAATCGTCACGGAACCGTCACCTTTGTCTGCAACATCTGTCGAGTTGTCTTCTTCGGTGTGGGAACAGTCTTCTGCACCCACTGGTTCAATCACGAGAAGGACCCCATGTTTGTGGCGAGTAGGTACTCATTCCCAAAACTATGTGTCTCGAATCGAGGAAAGAATCCCATTGGAAAACAGGCTGGAGAGCAGTATTTTTTCGTCGCCGAGTACGTCTGCAGATCGTGCAAGCAGCAGTTCTCATCGGACGGTGATTTATTGAATCACATGAGAGAGTGCAAGGGCGAGGAGTCAAAGCAGCCTAGTCTACCAAAGGAAGCCCCTAAGGAACCCCCGAAGAATTCGCCAGCACTTCCAGCCCCGCCAGCCCCTCCAGCACCGTCAGCACCACCAGCACCGCCAGCACCGCCAGCACCGCCACCAGTGCCAGAGCCCACCAAGAAGCCAGTGGAGAAAGTCAAATTCAATGTGATACCCAAGTCGCAGGTGATGGTGGCACTCCCACCTCGAGCCCCTCGACCTCGAAGCAAACCTGTCGTGCTAAGACCACCTCCACCTAGACCTGTACCTCGAGCAGCTGTGAACATACCCACTCCCCCTCGAAACATTCTACCTCAGCCCACTCCGGCCCCTCCACAGCCTACACCAGCCCAGAAAGTCCCCCAGACCATCTCCAAATCCCCACCCAAACCTAAGCCTCGAGCCCCTCCAGCTGTGACGATAATACAGACCCAAAGAGTCCCTCTACTTATCCCCAAACCCCCTGGAGTCCAAGACACGGCTGATGCTTACGTGAAAACTTGGATATGTGATATCTGCGAGAATGCATTCTCAACGAGGAGATCTCTCGTCGAGGAGCATGCCTCGAGCCACTTCGACGCGACCCTCGCCCTCCAAAAGTTCAACAAATCTGCTGACAGACCCTTCGCCTGTACAATTTGTCGAAAGGCCTATGGCTCGTTAGATGCTCTCAACAATCACTGGCTCAAGCACGAGTTGATGAGGTACTGTTGCTCTGTCTGCAAAGACACCTACTACACCCTCTCGGCGTACATCAGGCACGTGGCAATCCTCTGCAGGAAGGAGAATCCCACCTGTAGAGTCTCCTTTGGGACCAAGGACATCTGTCGACTGTGTAATCTTGCCTTCAAGAACTCTAGCGATCTTTCTAGACACAATATCGATTATCATGCCGCTGGGAGGATTGTGGGGACTCGAGTGGAACTCAGACAACTCGTCCCGCAGCCAGTGGTGACCAGAGCTCAGGGATCTGACAGCCAGAGCCAGAGGCCAACAACACCGACAAACAATTTAATTCCTGTATCTTGTCAATTCTCACCGAAAAGTCCCAAAACTTCACTGCCTTCAGCTGTAATTCTCTCACCCTCTAGGAATTCTCAGTCCGGGGGGCTTGTTCTCTGCGTTCAGCCCCAGAATACCAATGAAATTGGCACGAGTCAGCAGGTGAATGGGCCTGTGGTCATCAACATTGCTATACCCAATGTCGTTAATAATTCTAAGCAGACGACTTCGCCACCGAAAGTCAGGGCTCTCGAGGATCCAACGGTCCAGGTGGTGCTCACGCAGGCCAATAACTCTGAGTCGACGCTCTCTGCCTCTCTCGTCAGTAATTTGCAACCGGTGAAGACTATGGAAGCCTCGAGGAGCCAGAACTCGTCGACATTCGCTCTCACTGTGAGGGATACAACAGCCACTGGGGGTTCTGTCACTGAGAGGGACGCTGCCGTGGAGGAGGAGACCATCTCCAGTGATGCCATGAATTCTCTCCTGCAGAATCGACCGGATGGTGCTGATGCCAATGCCCAAAATCAGGAGAATCCAAGGGTCAATCTGACCTCTGGGGCTGGGAGTGACGAGTGCAGACTCGCTGTTGAAGACATACCAGAGAACAACACCACCAACAACAGTGATGATGTCCAGATTCTAGAGGTGACGAAGAGCCCCCCGAAGGGATCATCGCAAAATCGACTTTCTATTCTGAGGAAGTCTCTTCTAACTCCAACAGCTCCGGACAGTGACATTGAGATCCTCTCGGAGACTTCAGCTCCAGATGAACCGGAGAAATCGTCACCTAAGGAACAAACTCCAGAGCAGGCCAAGAAGAAAAGCCCAGAGGAAGCTGAGGGCAGCTCGACAACTCTTGTTAAGAAACCTCTCTCGAAACCGCAGGGATTTTTACGTGTTAAAAATTTATCTGAACTGCAGGATGAGAATAAAAGTTGTAACCAGACTCGTGGAAATAGTAAGAAAGGAAATACACTGACTGAGCATTTGATGGCACGCTTGAGGCCAGCCAAGCAGCCGACTTCATCGGCCAATGGATTGGAGTCTGAGGTAAATACTCGGAATACCGAGCGTCTGGTAAATTCTCCCCACGTTCCAGGCAGTCGAATACTTCCGAATATTCCTCAGAGGATCCAAGGAAACGACGCCAGAAGAGCAACACCACTGTCAGCGCGACAGGACTCATCGAGTGGACCACAAAAACCCATGAATCGAGTGACACCAATACCAACGTCAAACACTGGAAATGGACACTACAGCAGAACAATGAATCCACAAGTGTATGGTGGCCTGAGTGGGGATGAGAGACTGCAGGGAACAGTGAATCAAGGAGGGAATACACAGAATACATACGTATGTCCAATTTGTCCACAAAATTATCATAACACTCTCTATGATTTCCTCACTCACTTAACTCATCATCAAAATTTACCTCTCGATGTTCAAGCAGTTGTGTACAGTTTgattaatgagaaattcccATACCAGATGCAGGGTCAGAGACAACTGGTGGGTCACAACAAGTACAAGTGTCTAGTGTGCTCGACCTTTGAGACTGATTCACCCGGAGCATTCCAGAAACATTTTGCCACACACTCGCAGCAGATGCTAAGCTCGGCAATTCAAAATTGTAATATGGCTTACAGTCAGCAATTGGGTACGGCTGTTAACTCTATGTATGGACAATATCAGTATCAGAATCAGGTGCCATCATCGACAACGCACAATCCACAGATGTTCAGCTGCAGTTTGTGCTCGAATTATCAGTTCACAAATTATCAGGATCTTGAGGCACATGTGCAGGCTATTCATGGAAATATTATGAATGTGTCGGAACGTTTTGTATGCGCCCTCTGTCCCAATGTCACGGTCTTCGATAATGAACAGACGCTGAAGGAGCATCAGGAGACACAGCACACATTTTTGTGCACAATCTGTATGCAGAAGTTTAACAATTCGTTTGAGTTAGATAGTCACTGCAGTCTTCATAAGGATGGACAGATTGGCAGTCAGTATGAAAATAGTAGTGGGTGA
Protein Sequence: MDKENMEKCRRVSVVLTPLKSSEIKRWKNQRKSHKKRKNRWQKGYVKPLKHPVRKLSVSSSNIQENSRDDADIRTPVTLLSDDPPPADIRNADVSNADETKELSVPGGDDEALTLWKYKRKRASISSDSGGEEPAPKRVTDPEVTPKKLTINLSRLAVQMPSRGVLLDDESEVEADSVEDAASLIMDSCEDSADRAQGGQGLRQKPRESDASDEEGVKESERIIESASQNSEPESVNMTEALSDDENESDNDEELMDLCLMKEPTVLVTKLEDVIEALEHNRYFPDRQHLTDRYLDIIRRFTSQEDSEDSYYLIMSPDSKSSHSSGDDDDDDDELFTTNRFSGRLRNRRRISSDMSSCSDVDPLRNGENEDSSGAQGLTVIEKSGTSAGAPGEKGPNVSEASACSNIPAVNEEDDTSNSPETVLSTPLSCEECKETFATVGGVLKHTCEPTSPNKGKSKGKALKTKKHPKLTPKSTSLECTLCSQTFENHGLLQRHLLAHSASDHEKAFKAAKRQSRSKQSQPEVEVLSSIDSDKSDTEDKSDTERTALNEPGIAIMNEKSATGNSKKTSVPVAICPCHVDDLKPTDLTVQIEMVLFCEICKVLFRRSECIETHYRTNALCNKDRRKGRSPRLFCSTCRVVLSNLSDMRKHLEKHVSINRHGTVTFVCNICRVVFFGVGTVFCTHWFNHEKDPMFVASRYSFPKLCVSNRGKNPIGKQAGEQYFFVAEYVCRSCKQQFSSDGDLLNHMRECKGEESKQPSLPKEAPKEPPKNSPALPAPPAPPAPSAPPAPPAPPAPPPVPEPTKKPVEKVKFNVIPKSQVMVALPPRAPRPRSKPVVLRPPPPRPVPRAAVNIPTPPRNILPQPTPAPPQPTPAQKVPQTISKSPPKPKPRAPPAVTIIQTQRVPLLIPKPPGVQDTADAYVKTWICDICENAFSTRRSLVEEHASSHFDATLALQKFNKSADRPFACTICRKAYGSLDALNNHWLKHELMRYCCSVCKDTYYTLSAYIRHVAILCRKENPTCRVSFGTKDICRLCNLAFKNSSDLSRHNIDYHAAGRIVGTRVELRQLVPQPVVTRAQGSDSQSQRPTTPTNNLIPVSCQFSPKSPKTSLPSAVILSPSRNSQSGGLVLCVQPQNTNEIGTSQQVNGPVVINIAIPNVVNNSKQTTSPPKVRALEDPTVQVVLTQANNSESTLSASLVSNLQPVKTMEASRSQNSSTFALTVRDTTATGGSVTERDAAVEEETISSDAMNSLLQNRPDGADANAQNQENPRVNLTSGAGSDECRLAVEDIPENNTTNNSDDVQILEVTKSPPKGSSQNRLSILRKSLLTPTAPDSDIEILSETSAPDEPEKSSPKEQTPEQAKKKSPEEAEGSSTTLVKKPLSKPQGFLRVKNLSELQDENKSCNQTRGNSKKGNTLTEHLMARLRPAKQPTSSANGLESEVNTRNTERLVNSPHVPGSRILPNIPQRIQGNDARRATPLSARQDSSSGPQKPMNRVTPIPTSNTGNGHYSRTMNPQVYGGLSGDERLQGTVNQGGNTQNTYVCPICPQNYHNTLYDFLTHLTHHQNLPLDVQAVVYSLINEKFPYQMQGQRQLVGHNKYKCLVCSTFETDSPGAFQKHFATHSQQMLSSAIQNCNMAYSQQLGTAVNSMYGQYQYQNQVPSSTTHNPQMFSCSLCSNYQFTNYQDLEAHVQAIHGNIMNVSERFVCALCPNVTVFDNEQTLKEHQETQHTFLCTICMQKFNNSFELDSHCSLHKDGQIGSQYENSSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01273421;
90% Identity: iTF_01273421;
80% Identity: -