Basic Information

Insect: Psyttalia lounsburyi
Gene Symbol: -
Assembly: GCA_030522865.1
Location: JAPYZN010003386.1:2168-8002[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0025 0.41 12.2 0.1 1 20 197 216 197 217 0.96

2 20 0.021 3.5 9.2 2.6 2 23 227 249 226 249 0.96

3 20 0.0056 0.94 11.0 4.7 1 23 259 282 259 282 0.93

4 20 2.6 4.3e+02 2.7 0.1 5 20 572 587 571 588 0.92

5 20 0.25 41 5.9 0.8 2 23 598 619 597 619 0.95

6 20 7.9 1.3e+03 1.1 1.7 1 10 646 655 646 664 0.94

7 20 2.3 3.8e+02 2.8 0.1 3 20 776 793 774 795 0.88

8 20 0.0036 0.6 11.6 1.0 2 23 803 825 802 825 0.96

9 20 0.00033 0.054 14.9 1.1 2 23 835 857 834 857 0.92

10 20 2.1 3.5e+02 3.0 0.8 2 19 878 895 877 897 0.91

11 20 3.5 5.8e+02 2.3 5.8 1 23 905 928 905 928 0.96

12 20 0.23 38 6.0 9.6 1 23 939 962 939 962 0.93

13 20 0.019 3.1 9.4 0.2 1 23 982 1004 982 1004 0.97

14 20 0.17 28 6.4 5.2 1 23 1010 1033 1010 1033 0.94

15 20 0.11 19 6.9 0.2 2 23 1043 1065 1043 1065 0.96

16 20 8.5e-05 0.014 16.8 0.6 1 23 1129 1151 1129 1151 0.97

17 20 0.5 84 4.9 2.0 2 20 1267 1285 1266 1287 0.92

18 20 0.0039 0.65 11.5 0.8 1 23 1294 1316 1294 1316 0.98

19 20 0.45 76 5.0 1.0 1 19 1327 1345 1327 1350 0.81

20 20 0.0011 0.18 13.3 0.8 1 23 1536 1559 1536 1559 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0025	0.41	12.2	0.1	1	20	197	216	197	217	0.96
2	20	0.021	3.5	9.2	2.6	2	23	227	249	226	249	0.96
3	20	0.0056	0.94	11.0	4.7	1	23	259	282	259	282	0.93
4	20	2.6	4.3e+02	2.7	0.1	5	20	572	587	571	588	0.92
5	20	0.25	41	5.9	0.8	2	23	598	619	597	619	0.95
6	20	7.9	1.3e+03	1.1	1.7	1	10	646	655	646	664	0.94
7	20	2.3	3.8e+02	2.8	0.1	3	20	776	793	774	795	0.88
8	20	0.0036	0.6	11.6	1.0	2	23	803	825	802	825	0.96
9	20	0.00033	0.054	14.9	1.1	2	23	835	857	834	857	0.92
10	20	2.1	3.5e+02	3.0	0.8	2	19	878	895	877	897	0.91
11	20	3.5	5.8e+02	2.3	5.8	1	23	905	928	905	928	0.96
12	20	0.23	38	6.0	9.6	1	23	939	962	939	962	0.93
13	20	0.019	3.1	9.4	0.2	1	23	982	1004	982	1004	0.97
14	20	0.17	28	6.4	5.2	1	23	1010	1033	1010	1033	0.94
15	20	0.11	19	6.9	0.2	2	23	1043	1065	1043	1065	0.96
16	20	8.5e-05	0.014	16.8	0.6	1	23	1129	1151	1129	1151	0.97
17	20	0.5	84	4.9	2.0	2	20	1267	1285	1266	1287	0.92
18	20	0.0039	0.65	11.5	0.8	1	23	1294	1316	1294	1316	0.98
19	20	0.45	76	5.0	1.0	1	19	1327	1345	1327	1350	0.81
20	20	0.0011	0.18	13.3	0.8	1	23	1536	1559	1536	1559	0.97

Sequence Information

Coding Sequence: ATGGCTCGGGCGATGATCTACCGGGGCTCCTCGAGCCTCCTCCACGTGGACTCACCCACAGATGAGGTGGATCCCCTGGAGTTACCGATAAAAACCGAGCCAAGCAGTCCAGCGGGGGAGTCCGCTTCAGATTTTCCTGACTCCCCATATCAGCCTCCAGACTCGACAAGTGTCTCAGATCCGCCAGATGTCCGGGAGCCACTACAGCCATTAGAGCATGCGGAGTCCCTGGGGCCATCCGAGCCAGTGGCGTCCGAGGAGCCAGCCGAGCCTGTAGAGTCCCAGGAACCCCCAGAGCCTATGGACACACAGGAATCCACAGTGCCTCCAAAATCACTGGAGCCACTAGAACCACTGCAATCATTGGAACCAGAGCAGCTGGCGTCACTGGAGTCCCTGGATCCGCCAGAGCAACTGGATCCACCCGAGCCCCAACAGGACCCTCTCTCGTCGCCAGCGCCACCAGATTACGACTCCTCGGCAAGTTCAACCagTCACCAATTAGCTCGATTTCTCCTCAACAATCGAGGTAAACTCAAAGGTAGTAGACTTCGCACTAGATGCGAACAATCGACAATATCCGTAGTCTATAAATGTCCAATTTGTTTCGCTCCATTCAACGATCGCGGCGGTTTATCAAAGCACTTGACCTTCTTCAGAGGTTCCCCAAAGCGAATAAGTTGTCATATGTGTAAGACAGCCCTAGCAACTCCCCATCAGTTGCTCTCCCATCGAAAGTCCTCCCATCGCCACATCGTCTGGCCAGACGCGCCCTACAAATGCGAACATTGTCCCCTCTCTTACTCAACAAAATTATCTTTGCAAATGCACCTGTTTCACTACCACAACATAGCGAATGGTGATAAGACGCGAAAGCGTAAGGTTAGGAAGCCACCAGCTCCCTCGCTACCTATTAATAATGAACGAGCGTCAACGAGAAGTGCGCGTAAGCGAAAACGAGCTCAATCGGCAATTGAGCGTAGTCAGAGTCTGCCCGCAGCCCCGcaaactcgtgcgaaaaatcGACCAGGcccaaaatttgcaaaatccATCGGCGAGGATTTCATGTCCCCCAGTCTGACATCTCTGTCTAGCGGTCCTAGTGCCAATACCTCGGGCACAAATGCTCCCTTTGTTCAGATTCATGCGATACCTCAGGAGGTCGAGGCCCTCTTGAGTGATTACGAGGGCAGTCCTCTGAGCCAGACGAAGCGCGACGAGTCCGAGGAATTAGCTGAAGCTGTGGAAGTCAAGTATTTGAGATCAGGTAAAACGGTGAGACTATCAACGGCTAGTAAGCCTGAGGTGTCCGAGACGAAGCTCCAGGAGTCAGACCCAAAGTCTGAATCAAAAGCCAAGACACCTTTGAAGAGATCCTCGTTATTTCATCCAACTCCGAAGAAGAAGGGAACACCGATGATACTAGCCACACGAAAAGTCACTCTTCTGAAGATGCTTTATAACTGCCGAGAGTGTTATGTTCCTCTAACTAGAATAGTAGGACCTGAAAATGGAGTGAATGAGACCTCTGAAGTGGTGCTCTCCAGCGAAGCCGAGATGGAAGGGACATCGATTGATCTACAgctgaaaaatttggaaattgccCTGAAAAAACTTGAGTCCACTGACTCGACTGATGCAGGTGAGCCTccaatagaaattgaaaagacCAAGGACACGAAGAAGTCAAAGCCCGAGATATACAGATCGAGTGTGTGTCGTACGAGGTTCACAACGACGcagaaattaatcaatcactaCTTGTGCTTTCACACTAACTCGAATCAGGATGAATGTGGGGTCTGCAGAATACGTTGCGGTAATGCTAGAAAATTGAAGAGTCATTTGTTACTTCACTGTGTCAAGATTATTCATTCCAAGCAGGACAAATCGCCGATTGATCCACGAGGACCGTGCGAGAAGTACCGAAAGAAATATGTCTGTCGGGGATGTAAGAAGCGATTCTGGCTGGGCTTTTGCTTGATTAAACATGAGGAGATCTGTAGATTCATTCAGCCAAAATGTAAAAAGAAACCTGAGACGAAGGACAATGTCATTGTCCGAAGGACATCTCCGAGGAAGCTTGAGAAGAAGACTGTTGAGATACAGCCTGTCAAGACTGGCAATCAGGATAATAAGACTGATCATCAGGCAAAGAAGACTGTTCAACCAGCGATGGACAATTTCGCTGTAATGGGAGTTAGTTGTGCTGGGCCATGGAACGCAATAGGCTCCTCATCACAAACAATGACTCATCATTCCTCAGCGCCACCAGGTTACCACTGGTGGGATAACAAAGTAATTACAGGATATCCCCCGCTCGCTTGTTCTATCTGCAACAATAATTTCATCACCACCGGCACCTTGGGAGagcataacaaaaaattttcaccgaaACAGTACACTCGCTGCGACAGATGTGGAACCTTGTTCCCCTCCAGGACACTCCTCCAGAGCCACAGGAAAGTGACTCATTCCGATGAGGATCAGTCGTCAAAAATGAGATGTCCCATTTGTGATCAGGgattctccaaaaaaaacaGTCTACGGGCTCACTTTCTCCACATCCATCAAGATCAGATAACCAACGGCATCGATGAGTGGCGGCGGCCGTATCCCAAATACGAAATGAAGTGTAATGTCTGCAAACTCATCTTCCACAATCGAAAAAGATTCATTGAGCATTCTCTATACTATTTCGATGATGAGCAGTACAAATGCGAGGTCTGCCAGGCGCGATTCACTGGACAATTTCGTTGTCACAAACACTTGAAGACCGAGCACTACTCGAAGGAGATACAGCAGGCTTACACTCACCACTGCTCCATCTGCAACGAGGGCTTTATGTATCAGTCACATCTGCACTCTCATATGTTTCACATGCATGATGTCGCTAATGATGTCACAGTTCATGGCGGCCATTTGGTGAATCTCGAGGATCCATTTGTCTGTGCCACATGTGAGCAACGCTTCGCCAGCATCAAGTTGCTGGATCAACACCAAAATCTTCATACCAATGACGGGACGTATCAGTGCGACAAGTGTGGTAGGAAGTGTCGATCTAATTCGATCCTCGAGTGTCATCTCAGGTCGTCGCACTCAAGAGAGGGAGACATACTTTATCCCAAATGTCCACTTTGTGGGGAGGGTATAACATCAACAACCTCTTGGATTTCCCACATCAAACATGCCCACCCAAACTCGACTAATCAGCCCTCAGAGTTCTGCCTTGAGAACATCTGTTCACTTGACGAATTGATACGTGAGCTAGGAGTGAGTCCCACAATTGGCAGACAATTGACCAGATCGACTGTCAACGAGGATATTGTAATATTGGATGAGGACGACAATCTGAGTATTGCCGAGATTCAGTCGTCCATCGAGTTCAATTGTGCTATTTGCGATGAGAAATTCACGTCGAGTCAGGAATTGAAATTACACAAGATCACTCATGGTCCCGTTAATTACGGATATCACGACAGCTTAAGCTATCCCAACGACCATGGGACTTACACCTCAACAGAGAATGATGTCGCCACGGAGACTCAtccattacaaaaaatgcCGACTTCCGATGTGATTTCTCCACCACTCGAGACAGTTCACCTTCCCCGCCTCTCTACCCAAGACTCCGCCGAGATTTTCCATGGTTATACCAGCGATAAGGGCCCCTGCAACATCTCAATCGCCAATATTTGCTCAGTCGGATTGGACGAGTACGAGAAATTAGCGAATAATCAGCTCCTCGAGGTGACTACGAATGACAACGCGGCAGTCGAAACAACTGAGACCAGCCTGAACTGTCGGATCTGTCATCTGGTCTTCTCCTGCAACAAGACCCTCCAAAATCACCTGATAAATTACTCCAACACTGGTGACTACATTTGCGAGGTCTGCGGACGGAGATTCAAGTGGCTGAAAGTCTTTCGCTCGCACATCAGAAGACATAATAAGAAGAAGGACGGAATTGTTCCGCTGTACTACTGCGAGCAGTGCGACGAGGCCTTCGCCACCATGGACGCCAAGCATATGCACTTCGCTCATATTCATAATGACCTTCATATGAAGCTGTCGGATGACGACGATGATGTTACGGTTGTTCGGGCAAAAGCGTCGGCCACCATGGGCGGGAATTCTGAAACTTCCCCGGAACAAACGCATTGCGAGACGTCAAAAGAACAAGCGAACAGGCAGACTATCGAGGTTGATCTTACTGAGGACGAGGAGGAAGGTGTTGCTGATACATCTCGAACTGTCAAGGGCACTGCGACATCAACGCCAACGCATTCCGTGGCACCTCTGAGTGCAGCTGTCAAGCCAACAGTTGCACAAGCGAGGGTTCCACCGATAACCCATCGTCTCTCTCAAGTTGTTCCCAACATCTGTCCAATTGTTTGTAATATCTGTCACATTGAGTGCCTTGATGTTGACTTTCTCGTGACTCATTTTGCTAATGCTCATGGCATTCGTCTGGCACCTTATTCACCAAACGATCAGTACAATGTTGAGGTACAATCCAATTATCAAAACAAGTCGGATCCCTTGAAAAATCCCCCGAACTATCAAGTAAATAGCAAAATTGATGGTGAACAACCGTCCCTGTTTTATTACTGCAAGACTTGTAGAATTCAATTTGCCAATGAATATTCATTGCTCAGTCATCTACGCAATGCTCATGCCAACAGTGAAACCGTACCTGGTAAACAGGATAATTGGAATTCATCGGATACAAAATCAAGTGGTGGAGGCGAAAGGGTTATGGTGGGGTCAAAAGTTCAGGGACAGGCAGCGGGAGTTGTGTCTATGGAGACGTCGTTCATCAATTCTGATAATTATATGTCAAATGCTGATTCATCAGTGCCCGATAATGCCATTGATCtgacaaaaaagaaaactgaTAACGTTGTATTaacgaaaattgatttgaaggGCAGACCTGACAGGCCTTATCGCATTCTCGGTGgcaaaaattcacagaatattcaattcattaGTCTTCAGAAGAAAGATCTTGTTAGTTTGACGCGACAGAGATTACAGACGAGTAAGAGTACGGGAGGGGAGTAA
Protein Sequence: MARAMIYRGSSSLLHVDSPTDEVDPLELPIKTEPSSPAGESASDFPDSPYQPPDSTSVSDPPDVREPLQPLEHAESLGPSEPVASEEPAEPVESQEPPEPMDTQESTVPPKSLEPLEPLQSLEPEQLASLESLDPPEQLDPPEPQQDPLSSPAPPDYDSSASSTSHQLARFLLNNRGKLKGSRLRTRCEQSTISVVYKCPICFAPFNDRGGLSKHLTFFRGSPKRISCHMCKTALATPHQLLSHRKSSHRHIVWPDAPYKCEHCPLSYSTKLSLQMHLFHYHNIANGDKTRKRKVRKPPAPSLPINNERASTRSARKRKRAQSAIERSQSLPAAPQTRAKNRPGPKFAKSIGEDFMSPSLTSLSSGPSANTSGTNAPFVQIHAIPQEVEALLSDYEGSPLSQTKRDESEELAEAVEVKYLRSGKTVRLSTASKPEVSETKLQESDPKSESKAKTPLKRSSLFHPTPKKKGTPMILATRKVTLLKMLYNCRECYVPLTRIVGPENGVNETSEVVLSSEAEMEGTSIDLQLKNLEIALKKLESTDSTDAGEPPIEIEKTKDTKKSKPEIYRSSVCRTRFTTTQKLINHYLCFHTNSNQDECGVCRIRCGNARKLKSHLLLHCVKIIHSKQDKSPIDPRGPCEKYRKKYVCRGCKKRFWLGFCLIKHEEICRFIQPKCKKKPETKDNVIVRRTSPRKLEKKTVEIQPVKTGNQDNKTDHQAKKTVQPAMDNFAVMGVSCAGPWNAIGSSSQTMTHHSSAPPGYHWWDNKVITGYPPLACSICNNNFITTGTLGEHNKKFSPKQYTRCDRCGTLFPSRTLLQSHRKVTHSDEDQSSKMRCPICDQGFSKKNSLRAHFLHIHQDQITNGIDEWRRPYPKYEMKCNVCKLIFHNRKRFIEHSLYYFDDEQYKCEVCQARFTGQFRCHKHLKTEHYSKEIQQAYTHHCSICNEGFMYQSHLHSHMFHMHDVANDVTVHGGHLVNLEDPFVCATCEQRFASIKLLDQHQNLHTNDGTYQCDKCGRKCRSNSILECHLRSSHSREGDILYPKCPLCGEGITSTTSWISHIKHAHPNSTNQPSEFCLENICSLDELIRELGVSPTIGRQLTRSTVNEDIVILDEDDNLSIAEIQSSIEFNCAICDEKFTSSQELKLHKITHGPVNYGYHDSLSYPNDHGTYTSTENDVATETHPLQKMPTSDVISPPLETVHLPRLSTQDSAEIFHGYTSDKGPCNISIANICSVGLDEYEKLANNQLLEVTTNDNAAVETTETSLNCRICHLVFSCNKTLQNHLINYSNTGDYICEVCGRRFKWLKVFRSHIRRHNKKKDGIVPLYYCEQCDEAFATMDAKHMHFAHIHNDLHMKLSDDDDDVTVVRAKASATMGGNSETSPEQTHCETSKEQANRQTIEVDLTEDEEEGVADTSRTVKGTATSTPTHSVAPLSAAVKPTVAQARVPPITHRLSQVVPNICPIVCNICHIECLDVDFLVTHFANAHGIRLAPYSPNDQYNVEVQSNYQNKSDPLKNPPNYQVNSKIDGEQPSLFYYCKTCRIQFANEYSLLSHLRNAHANSETVPGKQDNWNSSDTKSSGGGERVMVGSKVQGQAAGVVSMETSFINSDNYMSNADSSVPDNAIDLTKKKTDNVVLTKIDLKGRPDRPYRILGGKNSQNIQFISLQKKDLVSLTRQRLQTSKSTGGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01273367;
90% Identity: iTF_01273367;
80% Identity: -