Basic Information

Insect: Psyttalia lounsburyi
Gene Symbol: ZIPIC
Assembly: GCA_030522865.1
Location: JAPYZN010018743.1:422-2342[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.067 11 7.6 1.0 1 15 169 183 169 188 0.85

2 10 5.8e-07 9.8e-05 23.6 0.9 2 23 248 269 247 269 0.97

3 10 0.0072 1.2 10.7 2.2 1 23 275 297 275 297 0.94

4 10 5.4e-05 0.0091 17.4 0.6 1 23 302 324 302 324 0.99

5 10 5.8e-07 9.7e-05 23.6 0.2 1 23 330 352 330 352 0.98

6 10 4.4e-07 7.4e-05 24.0 1.8 1 23 358 380 358 380 0.99

7 10 0.002 0.33 12.5 0.3 1 23 387 409 387 409 0.94

8 10 1.8e-05 0.003 18.9 2.7 2 23 416 438 416 438 0.97

9 10 0.00012 0.019 16.4 2.5 1 23 444 466 444 466 0.98

10 10 3.3e-05 0.0055 18.1 0.9 1 23 472 495 472 495 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.067	11	7.6	1.0	1	15	169	183	169	188	0.85
2	10	5.8e-07	9.8e-05	23.6	0.9	2	23	248	269	247	269	0.97
3	10	0.0072	1.2	10.7	2.2	1	23	275	297	275	297	0.94
4	10	5.4e-05	0.0091	17.4	0.6	1	23	302	324	302	324	0.99
5	10	5.8e-07	9.7e-05	23.6	0.2	1	23	330	352	330	352	0.98
6	10	4.4e-07	7.4e-05	24.0	1.8	1	23	358	380	358	380	0.99
7	10	0.002	0.33	12.5	0.3	1	23	387	409	387	409	0.94
8	10	1.8e-05	0.003	18.9	2.7	2	23	416	438	416	438	0.97
9	10	0.00012	0.019	16.4	2.5	1	23	444	466	444	466	0.98
10	10	3.3e-05	0.0055	18.1	0.9	1	23	472	495	472	495	0.96

Sequence Information

Coding Sequence: ATGGAGGAACGTGATAATAATTGTCGTCTGTGCCTGAAGGATTTGGAGGAGAATTGCCTGTCAATATTTACCAACCCCACCAGCGGTGGACCGTCACTCTCCACCAAAATCATGGTCTGCCTGTCGCTTCCgatTGAGCCAACGACTGCAATTACCCCCAAAATCTGTAAAAATTGCGCGGAGGAAATCGCCCGTTTCTACGACTTCAGGGACAAATGCCTGAGAACTCACTACAGTCTCTCCGGAGCATACGAAGCCTCAAACAATCACGAGCACTGCCTTCCTAAGGACGACAAACCAGAGGAAACAATTTCGGATCCCCACTCTGCCTTAACCCCTCAGAATGAAGAACCTCCAGAAGCTTTGATAGACCCTAAGACCACCAATGAGACAGTAAAATCCTCACCACGTCTGGCTCCAGCCCCACCCGAGGACAATCCCCGGGGGACCCTCCAGAACCCGACAATTTCCCTCCGCACCGAGTCCCAGAATACGATTTACGAATACAAATGTCTGCACTGCAACAAACTATTCTCCGACCTGGACGCAGCCTCGCTGCACTGCATGGAGTGCAACAATTCCTCGGAGGACCGAGAGCCCCTTCCAGAggccaccaccaccaccaggACAAGGTCTAGTCCCCCAAATGAGGAACCTAAAACCCCCAGAACTCTCGCCAATCCCCACGAACCAAGTGGCAATCCTTCACGTCCAAGAAAACCCAAAATGAGCACAACCGTCGAGTGTTCAGAATGCAAAACAAAATTCACACGAGCATCTCTGCTAAAGCGTCACATGTCAGTGCACACTGGTGAGCGTCCGTACGCCTGCGAGACCTGCAACCGGCGGTTCTCCCAAATGGGCCAGTTGAATTTCCACCGAAAGTTCCACGTGAATCCCCGGTACCGCTGCACCTTCTGCGAGAAGCCCTTCCTCCGGCCGAGCGACGTGGAGAAGCACGTGAGGACTCACACCGGCGAGAAGCCCTTCACCTGCGACATATGCGACAAGTCTTTCGCACAATTGGTAGCCCTGAAGCAGCACGAGCGAGTTCACACTGGCGACAAGCCCTACACCTGCGAAATTTGTGACAAGAGGTTTTCACAGAAGGCGAATAAGACGAAACATCTGAAGATCCACAAGGAGGGAACGAAACCCTACACCTGCGGAGTCTGCGGGCGGAGCTTCTACGAGCACGAGGAGATGGTCCTCCACAGAGCGGGACATGGCGGCGGCAAGCCGAGGAAGTGCGACCACTGCGACGAGAGATTCCGGAAACTTTCGGAATTGACGGATCACGTCAGGAGGTACCACACCTTCGAGAGACCTCACAAATGTGCCTTTTGCTCCAAAGGATTCTACTCTTTGTACAATCTCAAGCAGCACGTCATGATTCATACCGGGCAGAAACCTTACTCCTGCGCAATGTGCGAATTGAAATTCACGCAGAAGGGAAATTTGGCGAAACATTACGAGAGGAAGCACAAAAATCAAGTCACCGGTTCGTTGGAGGCTGGGAAAAGTGAACattatctctctatataa
Protein Sequence: MEERDNNCRLCLKDLEENCLSIFTNPTSGGPSLSTKIMVCLSLPIEPTTAITPKICKNCAEEIARFYDFRDKCLRTHYSLSGAYEASNNHEHCLPKDDKPEETISDPHSALTPQNEEPPEALIDPKTTNETVKSSPRLAPAPPEDNPRGTLQNPTISLRTESQNTIYEYKCLHCNKLFSDLDAASLHCMECNNSSEDREPLPEATTTTRTRSSPPNEEPKTPRTLANPHEPSGNPSRPRKPKMSTTVECSECKTKFTRASLLKRHMSVHTGERPYACETCNRRFSQMGQLNFHRKFHVNPRYRCTFCEKPFLRPSDVEKHVRTHTGEKPFTCDICDKSFAQLVALKQHERVHTGDKPYTCEICDKRFSQKANKTKHLKIHKEGTKPYTCGVCGRSFYEHEEMVLHRAGHGGGKPRKCDHCDERFRKLSELTDHVRRYHTFERPHKCAFCSKGFYSLYNLKQHVMIHTGQKPYSCAMCELKFTQKGNLAKHYERKHKNQVTGSLEAGKSEHYLSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01273283;
90% Identity: iTF_01273283;
80% Identity: -