Basic Information

Insect: Psyttalia lounsburyi
Gene Symbol: mecom-a
Assembly: GCA_030522865.1
Location: JAPYZN010003387.1:5185-8938[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.34 57 5.4 0.2 1 23 150 173 150 173 0.91

2 8 1.3e-05 0.0023 19.3 0.0 1 23 179 206 179 206 0.96

3 8 4e-06 0.00067 21.0 2.6 1 23 212 234 212 234 0.95

4 8 4e-05 0.0067 17.8 5.3 1 23 240 262 240 262 0.99

5 8 0.0028 0.46 12.0 0.5 3 21 271 289 269 290 0.93

6 8 5.7e-09 9.6e-07 29.9 1.2 1 23 674 696 674 696 0.99

7 8 7.6e-07 0.00013 23.2 3.2 1 23 702 725 702 725 0.97

8 8 8.5e-06 0.0014 19.9 3.4 1 23 731 753 731 753 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.34	57	5.4	0.2	1	23	150	173	150	173	0.91
2	8	1.3e-05	0.0023	19.3	0.0	1	23	179	206	179	206	0.96
3	8	4e-06	0.00067	21.0	2.6	1	23	212	234	212	234	0.95
4	8	4e-05	0.0067	17.8	5.3	1	23	240	262	240	262	0.99
5	8	0.0028	0.46	12.0	0.5	3	21	271	289	269	290	0.93
6	8	5.7e-09	9.6e-07	29.9	1.2	1	23	674	696	674	696	0.99
7	8	7.6e-07	0.00013	23.2	3.2	1	23	702	725	702	725	0.97
8	8	8.5e-06	0.0014	19.9	3.4	1	23	731	753	731	753	0.99

Sequence Information

Coding Sequence: ATGCCCaacgaaaaaagaaatccTGAAAATCACCTGTTGTCGAATCAGAATCCCCCGAGGCGTGCGAAATTCCGCGCAAACGAGGTCCGCACACTAGCCCCGGGGGCGAAGGGTCGCGGGGGTAGTGCCACCCCCTCACCATTAACGTCCCTGTATATCATCAAGGGTCGCGTGCTCTCAGCTCATCTGGTGCAAAACAGCGTCACAACAGAGGCACTATCTCACCACACGTGGAATGGCTTTCACACGACACGTTCGGTGCCTCCAAAGAAAGTGTACACCAGTCGTTGGAGGGGGTGGGGAGGGGTTGGCTCTGGAGGGGTTAAAGGGAAGAGGCCTTTGGCAAAATCAATGCTCCCACACCATATACATCCTGCACAATATGAGGGTGGCGATCTGACatTGGATTGTCACCTGGTGACCTCCCACCGCTACCCCTCGGACCAGCATCGCTGCGACAGCTGTCCCCGAGGTTTCGCCTGGCGGCCCCTGCTGGTCCGTCACCGAGCCCTGGTCCACAGAAATCTCCGGAAATATCCCTGCGAAAATTGTCCAAAGGCGCCTCCCCAGGTATTCACGGACGCCTCCAATCTCCAGCGTCACATCCGTACGAATCACGTTGGGGCTCGCAGTCACGCATGCACGGAGTGTGGAAAAACCTTCGCAACGTCATCGGGCCTGAAACAGCACACCCACATTCACAGTAGTTTCAAGCCCTTCAGATGTGAGGTGTGCTTCAAAGCCTACACACAATTCTCCAATCTCTGCCGTCACAAACGCATGCACTCCCTCTGCCGGACGCACATTAATTGCGCCAAATGTGGACAATCCTTCAGCAGCGGTACCTCTTTATCAAAGCATAAACGTTTCTGCTACTCAACAAATCCACCCCGCTGTGGTAATCCCCATCCGGgtccaccaccaccaccaccaccgccaccaCAATCGGGAGTCATGTCTCAACTGCCATCATCAGGTGGTGATCCATTCCTGGTGTATCCACGTCCACCAGTCTCACTGCCGGGTGGCTTTCCCCTCTATCCGCCAAGCCTAATGGGCCCCTACCCAGGAATCTTCCCCAATACTCCCAATTTCCTGAATACACCACTGCTCTTTCCAAAGATACCGGATGATCCGAAGCAAAACCAAAGTGAGAGTCCAAAGAAGGAGAGATTCACACCACCGAGAATTCTCCCAACCAACAAAGTATCACCATCGGCTGGTGAAGAGGCCACATCGACATTCAGACCATCACCAGCACGACCAAGTATTCAACCAACACCCGAGAGTGACGACGAGTCCAAGAAGGATGAGACACCAGTGGAGAAAATGGACGCTGAATCATCATCGTCGTCTGAATCCACTGATCAACCACTGGATCTTCGAGTTATGAAAAAGACTGAGGGACATGGAGTGACGAGAATTGCTGATAGTCGAACACCATCGCCAGTACCAGTGCCGAGGAGTGTTACACCGGAGATTAAATCAACTGTAGACGATGATGATAAAGAGCAGAGGAGAAATATGGATATTAGAATAATGAGTGAAATGAGCAAATTGAGCGAAATGAGCGAATTGAGTAAAATAAGCGAAATGAGCAAAATGAGCGAAATGAGCAAAACAagtaaattgtgtaaaaatcGTGATACACGCGATTACCACGAATCACCATCATCCCCAGTAACGAGAAATCATCCCCAAGAGCAACAACTACCAAATACACCACCTCACATCTCATATCCACGTCCAATTCATCCGATGTTCATCGAGGCAATGTACAGAAGTCCAGGAACATTTGCTGGCTTTCATTCGGCTCCACCATCAGCACCTGACTCACGTCTACTACCCCCATTACCCCACTTTGGACCAACACGGGGCATACCTTTTTTGGGCAATCTCATGAATGGTCTGAATAGATCGGGTTTTGATCTACTGGCAAGACCGCCCATGAATTTTCCCGGTGTCAAGCCCTTTCAGGAGAGTGTAATGCATCATCCACTGGGTAAGATCAAGGACAGGTACTCGTGCAAATTTTGTGGCAAAGTATTTCCTCGATCGGCCAATCTCACGAGACATCTGAGAACTCATACGGGGGAACAGCCGTACAAGTGTAAGCACTGCGAGAGATCATTCAGCATCTCCAGCAATCTTCAGCGACACGTCAGGAATATTCATGATAAGCAGAGGCCATTCAAGTGTCCACTTTGTGAGAGGTGTTTTGGACAGCAGACCAATCTTGATAGACATCTCAAGAAGCATGAGGCTGATGATGGTAGTGTTGTTGTGTCGGTTGCTGACTCGCCGGGTAGTAGTAATGAGAATGATCGCGAGGAGACTTACTTCGATGAGATCAGATCGTTCATGGGGAAGGTCACTTATGCTGGGGATAATTATGGCATTGGCCATCCGGAGTTCATTAGTGGGAAGAGGGGGGAGTATGAGTATGATGAGTACAGCGAGGAGAGGGTTAGTCCTATTGATGAGAGGGGTATGAGCCCGGAGGGGGGCCGCAAGGAGATCAGGGATGGCTTTGAGATGGGCTGCAGGGACAAGGGGGAgattatcaataataatacCGCTGAACCCGTCATCGAGATCTCCACATAG
Protein Sequence: MPNEKRNPENHLLSNQNPPRRAKFRANEVRTLAPGAKGRGGSATPSPLTSLYIIKGRVLSAHLVQNSVTTEALSHHTWNGFHTTRSVPPKKVYTSRWRGWGGVGSGGVKGKRPLAKSMLPHHIHPAQYEGGDLTLDCHLVTSHRYPSDQHRCDSCPRGFAWRPLLVRHRALVHRNLRKYPCENCPKAPPQVFTDASNLQRHIRTNHVGARSHACTECGKTFATSSGLKQHTHIHSSFKPFRCEVCFKAYTQFSNLCRHKRMHSLCRTHINCAKCGQSFSSGTSLSKHKRFCYSTNPPRCGNPHPGPPPPPPPPPQSGVMSQLPSSGGDPFLVYPRPPVSLPGGFPLYPPSLMGPYPGIFPNTPNFLNTPLLFPKIPDDPKQNQSESPKKERFTPPRILPTNKVSPSAGEEATSTFRPSPARPSIQPTPESDDESKKDETPVEKMDAESSSSSESTDQPLDLRVMKKTEGHGVTRIADSRTPSPVPVPRSVTPEIKSTVDDDDKEQRRNMDIRIMSEMSKLSEMSELSKISEMSKMSEMSKTSKLCKNRDTRDYHESPSSPVTRNHPQEQQLPNTPPHISYPRPIHPMFIEAMYRSPGTFAGFHSAPPSAPDSRLLPPLPHFGPTRGIPFLGNLMNGLNRSGFDLLARPPMNFPGVKPFQESVMHHPLGKIKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKHCERSFSISSNLQRHVRNIHDKQRPFKCPLCERCFGQQTNLDRHLKKHEADDGSVVVSVADSPGSSNENDREETYFDEIRSFMGKVTYAGDNYGIGHPEFISGKRGEYEYDEYSEERVSPIDERGMSPEGGRKEIRDGFEMGCRDKGEIINNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01273278;
90% Identity: iTF_01273278;
80% Identity: -