Basic Information

Gene Symbol
Jarid2_1
Assembly
GCA_030522865.1
Location
JAPYZN010000096.1:25152-31055[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.3e-23 2.8e-19 70.3 0.0 6 89 1312 1393 1308 1393 0.94

Sequence Information

Coding Sequence
ATGGTCCTGGGACGAAATGATAAACGCAAGAGGAAGGAAGGGGATCTGGTGGATCTCATGGATCCAGCGTCAACTGCTCCAAAAAGAGCAAAAGTGCACGCCCAGCGAAAATTCGCCCAAGGAGTAGCGACGATATTCTCGCCAGTGCCAGCCCTGGTGAAAGAAAAAGAGAGGCCGAAGCCGGCCCTGGTAACCGAGCTAATAACGCACAAACGTCCAAATACCGAGGACTTCCTCACATTCCTCTGCTTCCGCGCTACCTCGATCCTCCCGCCTAGTCTGAACTTCTTCAATCAATCAAAGAAAGAGAAACCAGAGGCCAAGACCCCTCGTCGAGGACATGCCACCCCATCGTCCACCCACGGCCCAGCACCCCTGACAATTGCCCCGTCAAAACCCGAGCGAGAGGATTCCAAGGCCCTCTCCAAACCAGCCCCAGCAGCGCCCGTACCAAGTACCAccaagaaaaaattccccactGTAATCCACAAACCCGTAGCCGTGAACAAATATAAGACAGCGACATCCACAGTCCAGGcgctgaagaaaaaatataaagagcAAAGATTGGCAAAGCAACGAATCGAGAAGAAGTTAAAGACATCGGTGATGCGAACACGTTCAGCGGCCAATCGAACTCTCCTAAAATCCCCCACAAAATTATCATCAAACACATTCTTAAAGCACCTGAACAAGAAGAGCATCTGCTTGAGGAGCAGCGGAGCTGTCGAGAGGCCGACGAAGCCGAGCAAATTGTCGGCAAAGGTGAAGAGCAAACCAATGAAGAAGAAACTCGAAGAGAAGAGCGAGTCAAGTGGAGATTCAGCTTCTGAGGATCACACGACCCCCAGGAAAACCCCAAAATCCAAGGCTCCAGCTGTCCAACAACCACCAAAAGATATCGTTAAAGCGAAGAATCCTGGGAAGACTAAATCAGATCCCGTGAGAAGAGTGACACGATCTCACCGAGAGCCAGTGCAATCGCAGTCGAGCCAGAGGCCCTCGAGGAAGACTAAAGAAGCCGCTGCAGTCTACATGGAGATCCTCAGTCGAAAGCTAGTGAGTCCCGACCTCGATAATGACGACAATATTTCAGTGGAGAGTTTCCCTGAGGTGCCAAACGCTCGGCGGGACTCAGCTGCGAAAAATGCCCTGAACGAGAAGAAAAAGATCTCTCAGGCTGTGAAAAAGTCTCACGAGGAAGAGAAGAGGATTCCGGTCAAGAGGAGTGTGAAGAGCTCGAAGTACTCGGACAGTGACGACAACTACTCCATTCAATCCGAGAAGAGCAATCAGACGAGTGTAAAGACCCGAGCTATAACTCGAAGAAGTACCTCAGTCATCAAGTCCTCCTCGGCTCGTAATTTGCGCTCGACCGCCAAATTCCCAGATCAAAAATTTGACAAATCCACGAAATTAAGTCCAAAATCAGCGAGTGTTCTCAAAGACAAGAGGAAGGTGAAGCCCAAGCGGAAGAGCGACGACGAGAAATTGAGTGCTAGTGACAAGCCAAGAGCAgctgttaaaaaaatcctgaagaagAAAGCCGAAGTTGAGGGAGAGTCTGACGAGGAGCCCCTCGGTGCAGTCCTGAACCGAATAAACAAGTCCTCAAAGCCAGCAAAGACTCCAGCCAAGCGAGCTGCATCAAAATCTAACGAGATaaccaaaaaatttcccccCGAGCCTGTGATAATGATCAAGAAGATGAGCAAAATTGCGACAACGCCAAAGGAGTCCGACGACGAAGGATCCTTTCGCGGTTTCAGTAAGAAGTCTGTGAGAACTCTCCCAAGTCCTTGTTCACTCAAAATGAACAATGACGCCCCAAAGCCCGGAAAACCTCAAGAGACTGATGGAAAACCCGAGGGATCCAAGGATTCCAACAAGGAGAAGCCCGCAGTAACACCGATAGCTCAGGAAAATATTACGAGTGAGCCTGATAAAAGTGATCCTCCCCAGGATATCACTAAGCCTCTGTCCCAAAAAGAACTCCCCCAATTCTCCACCAAAAAACCGTCGACTGCCCTCCCCAAAGACCCCGAGAAGAATTTTCTCGACGTGCCAACACTGCAGTCGTTGGGTCGCAAGGAGCGAGTGAATATGTCGACGGAGCAGATAGAGAAATGGCTGAATGAGAGTTCGATAATGAAGGAGGAGAGCAAGGCTGAGATGGAGACTGTGATTAATTTTCCGTATGGCATAGAGCCAGAGAAGCCCAAGTTAATAATCCCAACTGTCCCAACAATTCTCAACCCCAGCACCCCAAGCCCCTGCCACCTGTCGATTCCCACGAGGATTCAGCACCTGGTGAGGCCGGTGAACGTGGCCATCGCAAAAATAGCTGAGAAGCAGCTGAACAGCGGTGAATCCAACGCCAACAACAGCAAAAACCCAAAACCAGACAGCATCGTTTACTCGAGTACTGGAATAGCCACAGCAAAGACCTCGAACATTCCGACAAACAGGAACAAAATAAACGCCGATATAAAAGAGATCATAAAAGGAAGAACAGTGAAGCTCTTGGACTACACCCCCGAGAAGACAAACCGCCAAGTCCCCGAGACTGACAACGAGTCCGATATGAACAGCCTCAAAATCGCCAGCGATAACGAGACAGTCACCACTCCCTCGCCCAACGAGAAGAAGAAGACTCAAGTTCAGGGACGTAAGCCCTTCGTCTCAAAGGTGAAAGAACGAAAGCTCTCGATACCAAACTCCAACGCTTTCTCTCCAGAGGACGAGAGCAGTGTCTACGCCTTCAAGAACGAGACAGAAACCCCAGTCAACACTCCCTTCAGGCGAAAAATCCGCGAGAACAGGAGTGAGACGAGCCTGAACGAGTCCAAGAAGTCCTCAGAAGTCGATAAGTCCGATCAAAAGTCAGTGAGCCCCTCTAAAAATCTGGATAAATCCCCAGGAGTCAGCCAGCAGGAGAATCCATCAGAGACGCCTGTCTTCAAGAACATCCCCTCGATATGGAACAACGACAGCTGCTCCACGTCCATCGCAGTCCAGATAAATTTCAACGACTCCGCGGACTCTCAAGGGCTGAACAATCCATTCTACCAAGTCCAGCCCCGTCAGAATGCCCAGAAGAACTCGGAGAACACGAGCAACGAGATCTCCACTCAAACCGAAAACTCAAACTCCAATGAAGACGAGAACAATACAACTCAAGTGTTCTATATCCCCCTGGAGAACGTTGGAAGAAATATCTCTCAATTTACGACACTACAGGGACAACCACTGATCCAAGGAGTTGCTGTCAAACTGGGGACAGAGGGTCCCAATGGGCCCAACCAGCGAGTCCTTCTGCGCGCCCAGCTGGTGACAAAGCCCCCGTTAACCGTCACCAGGTGTCCACCTATTGGAACAGTCCAACCTACAACGAGAGCGCCTCAGGGCTCCCTGGACCCGGTGCCATCGACATCAGCCTCGAATCCCTCATCATCGCCAGTTAAACCCGACAAAAATATCACCCCTAACAACGATACTGACACTCCAGACAACGTGAAGAAGCCAGCAGCAAAGCCCGTGACTCGTGAACCCAAGAAGAAGGCCGGCGACTCCCTGAAGAAGTCAGAGCCTCAAAAACGTCAGGAGAAGCGATCGAAGAAGACCTCGACATCCATCGAGACTGAATCCTTATCGTCCACCCAGAGTACAGCTCTTGGTGCATCGATAACGAGCGACAGATCGGAGGCCCGTCTGGCAGATGCTCCCACGTTCTACCCAACGGAGAAGGACTTCCAGGATCCCCTGGAGTACATTGAGAAGATTCGTCCGCTAGCCGAGAAGTATGGAATCTGTAAAGTCGTGCCACCATCCAACTTCAAGCCCGAGTGCAAAGTCTCGGACGACATGAGGTTCACAGCTTACAATCAGTATGTGCACCGAATGCTGCACCGGTGGGGGCCAAATGTCAAGGAGATGATGGCGATAAAGAAGTATTTGGCTACTCAGTCGATCACATTGTCACAGCCACCTTGGATTGGGGGAATGGAGGTGGACCTTCCCCATTTGTATCAAACGGTGCAGAGTCTGGGGGGCTTGAAGGAGGTAATCGAGAAAAAGAAGTGGCAGAAGGTGGCCGATGGCATGAAGATTCCCAAGTCCGCGCAGGACAGGGTGACCAAACTCGATGACATCTACTGCAAGTATCTTCTGCCGTATGACACACTGAGCACTGACGAGCGAGAGAAGCTGTTCGAGGATGTGGAGACCGAGTGGAGGAAGAGGGAGACTAAAGCTCTGGAGAGGCTCAACGACTCCACAACATCGTTGTCATCCCTGGACACCAGCAATaacgaggaggaggaggatgaGGACAGCTCTGATGACACTGAGGAGTGCATAGTCAAGGGTAGGAATATGCCGTTGAATGCCTTTTACAGGATAGCGAGGAACACTCAGAGGATGTGGTTCGGTGAGAGTAATGCCAGGAATCAGGGGAATGAGAGTGAGGCGTCCTCTGGAGACGTTGAGAGTGCTTTCTGGAGGCATGTCTCGGAGAGGAAGAGACACGTGTGCGTTCATGCTGCTAGTATTGACTCTAGTGGACGGGGATTTGGCTTCTCCGTGGCGAAGAATAGCCCGTTTGCTAGACATCCCTGGAATCTGAAGGTGTTGACTAATAATTCGGGGTCAGTTCTGAGGGCTCTTGGACCTCTTATGGGTGTCACAATTCCCACGATTCATGTTGGCATGCTCTTCAGTGCCTGCTGTTGGTACAGGGATCCCCATGGGCTCCCCTGGATCGAGTATCTTCACACGGGGGCCAAGAAAATCTGGTACGGAATACCGAATGAGTTCAATGATAATTTCAGGGAGGCTCTCTCGAAGATGGTCCCCAGGTTCTGCAAGAATAAGAAGATCTGGTTACCAAGTGATACTGCCATGGTCCCACCTGAGATGCTAGTCTCCAATGGAGTTCCTCTCTGCAGAACTGTTCAGGAACCGGGACAGTTTATCATTGTCTTCCCCAAGGCGTTTACCTCCAGCATTTGCACGGGATATGTCGTCTCCGAGAGCGTTTATTTCGCTCAGACCACCTGGCTCGGAAATGCTGAGGAGATTTTCAAGGATCTCCAGGACAGCTGTGAACCTTCCATGTTCTCGTTTGAGAGATTGATGTTCAGTATTATCAATGACTCCAGGTCACATATTGATATTTTAAAACAGATACTGCCAGTTATGATGAAGATACGCGAGAAGGAATTGCACTATCGGCAGCAATTGGAGTGCTACGGCTTATCGAAGAAGGAGAAATTGCCACTACCTGACAATGGCAAACGAAAGAAAGCGGTGAAGGTGAAGGAGGACGATGGGGACTTTGAGTGCGAGACCTGTCGAATGAATCTCTTCGTTTCCCTGATGAATAATTCACAGGACGACAGTACATACTGTCTCCCTCATGCTCTACAATTGATTGCCCATAAAAAGCAGGTGTTGAAACACTGCACACTAAAGTATACGTATAGTGagGACGAACTAGATGACTTAATCCACAAATTAGAAGACAGAATCGAAgcaaaatcaaagaaaaaatcctcaaaacaGTCAGACTAA
Protein Sequence
MVLGRNDKRKRKEGDLVDLMDPASTAPKRAKVHAQRKFAQGVATIFSPVPALVKEKERPKPALVTELITHKRPNTEDFLTFLCFRATSILPPSLNFFNQSKKEKPEAKTPRRGHATPSSTHGPAPLTIAPSKPEREDSKALSKPAPAAPVPSTTKKKFPTVIHKPVAVNKYKTATSTVQALKKKYKEQRLAKQRIEKKLKTSVMRTRSAANRTLLKSPTKLSSNTFLKHLNKKSICLRSSGAVERPTKPSKLSAKVKSKPMKKKLEEKSESSGDSASEDHTTPRKTPKSKAPAVQQPPKDIVKAKNPGKTKSDPVRRVTRSHREPVQSQSSQRPSRKTKEAAAVYMEILSRKLVSPDLDNDDNISVESFPEVPNARRDSAAKNALNEKKKISQAVKKSHEEEKRIPVKRSVKSSKYSDSDDNYSIQSEKSNQTSVKTRAITRRSTSVIKSSSARNLRSTAKFPDQKFDKSTKLSPKSASVLKDKRKVKPKRKSDDEKLSASDKPRAAVKKILKKKAEVEGESDEEPLGAVLNRINKSSKPAKTPAKRAASKSNEITKKFPPEPVIMIKKMSKIATTPKESDDEGSFRGFSKKSVRTLPSPCSLKMNNDAPKPGKPQETDGKPEGSKDSNKEKPAVTPIAQENITSEPDKSDPPQDITKPLSQKELPQFSTKKPSTALPKDPEKNFLDVPTLQSLGRKERVNMSTEQIEKWLNESSIMKEESKAEMETVINFPYGIEPEKPKLIIPTVPTILNPSTPSPCHLSIPTRIQHLVRPVNVAIAKIAEKQLNSGESNANNSKNPKPDSIVYSSTGIATAKTSNIPTNRNKINADIKEIIKGRTVKLLDYTPEKTNRQVPETDNESDMNSLKIASDNETVTTPSPNEKKKTQVQGRKPFVSKVKERKLSIPNSNAFSPEDESSVYAFKNETETPVNTPFRRKIRENRSETSLNESKKSSEVDKSDQKSVSPSKNLDKSPGVSQQENPSETPVFKNIPSIWNNDSCSTSIAVQINFNDSADSQGLNNPFYQVQPRQNAQKNSENTSNEISTQTENSNSNEDENNTTQVFYIPLENVGRNISQFTTLQGQPLIQGVAVKLGTEGPNGPNQRVLLRAQLVTKPPLTVTRCPPIGTVQPTTRAPQGSLDPVPSTSASNPSSSPVKPDKNITPNNDTDTPDNVKKPAAKPVTREPKKKAGDSLKKSEPQKRQEKRSKKTSTSIETESLSSTQSTALGASITSDRSEARLADAPTFYPTEKDFQDPLEYIEKIRPLAEKYGICKVVPPSNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLSQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSTDEREKLFEDVETEWRKRETKALERLNDSTTSLSSLDTSNNEEEEDEDSSDDTEECIVKGRNMPLNAFYRIARNTQRMWFGESNARNQGNESEASSGDVESAFWRHVSERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNSGSVLRALGPLMGVTIPTIHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPNEFNDNFREALSKMVPRFCKNKKIWLPSDTAMVPPEMLVSNGVPLCRTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQTTWLGNAEEIFKDLQDSCEPSMFSFERLMFSIINDSRSHIDILKQILPVMMKIREKELHYRQQLECYGLSKKEKLPLPDNGKRKKAVKVKEDDGDFECETCRMNLFVSLMNNSQDDSTYCLPHALQLIAHKKQVLKHCTLKYTYSEDELDDLIHKLEDRIEAKSKKKSSKQSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00437871;
90% Identity
iTF_01272885;
80% Identity
-