Basic Information

Gene Symbol
Xbp1
Assembly
GCA_030522865.1
Location
JAPYZN010002517.1:2726-4338[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.33 5.1e+02 1.8 0.3 18 37 38 57 37 68 0.88
2 3 2.8e-14 4.2e-11 43.7 16.4 2 64 74 136 74 141 0.95
3 3 6.4 9.6e+03 -2.3 0.2 35 49 206 220 205 224 0.78

Sequence Information

Coding Sequence
ATGAGCTTTCCCAGGAGTGTTATCATAACATTGCCTAAGGGCATGCAAAAAACTGCACTCGGTAACGAAATCAATTTTGCCACGTCGATTATTGGAGGCAAGGCGAAGGTGGAATCGAGGAAAATGAAGATTGAGGAGATGGACGAGTCAACCTGTGAGATTGTCAAGCCAGACGAGTGGCTCCGAGGAAAGAAGAGAAGGCTGGACCACCTCACGTGGGAGGAGAAATTGCAGCGAAAAAAACTGAAGAACCGAGTGGCAGCCCAGACGTCCCGCGATCGGAAAAAAGCGAAGTTGGACGAGCTCGAGGAGACGGTGCGTGCCCTCCACGAGCAGAACGACCTCCTCTCCGAGGAGTGTGCCCTGCTGCGCACCCAAAACGAGGCCCTCCTCGCCGAGACCCAGCGTCTCAAGTCCGAGGCAAAGAATTCCCCCCCAAACACTCCCCCCACATCATCAGCATCATCAGTATCATCAGTGACTTACTGTGAATCATGGTGGCAAAACACAATCGGCACCAACTCTGACCCAAAATGCCACGGTAATCTTGAAGATACTGACCCTCTACCTCCTCTCGAGGAGCTCTTTGGAGATCTTCAAGGGGACGACTACATCGTCCGCCTCGAGGAGCTCGCCGAGAGCCTTCTGCGAGAGGTTACCGCCGAAGTGGAAGCAAATTCTAATCGACCAAATGACAAAGACATCGATCAGAAAGATACCACTGAAGAACATGACAATACAGAGAGAATGGTGGGGAAGACATCAGAAAATGTGGAAACCAGTTCAGCCAGTGGAGGCCTGAGGGACCCGTCCCACACGGAATCATCTCCAGATTGTTATCCCCTCGTTTACCCAACTCCAGCAAGTAATGGAGCGACAAACAACGAAATATTCACCAATCCCGACAACATTATCACCAATTCAAGTAACATTCCCACCCACTCAGACGGAAATATCAATGATTTACCAGCGAAAAATCTTCTCAAGTGTGAAATTAAACAGGAACCTGTTAATAACGATCTTGATACTGTCTATGGTACTTACGACGAGGCTACCAACTGTATTACCATCATCTGCACCGGGGAGGAGGACGTCGCCATTCAGGAATGCGTTCAGGAAGTCTCCAGTGATGATAGCACACATCTAACACCGAAATACTCATACAAAGATAATCTTTCACCTGGCTACACCATCAGCGACAGTCTGTCACCTGGTAGTGTTCATTCGGAGCACGACGACTGTGACTATGAGTCCCACGACGAGCCCAGAGTTGAGAGAACATCTACCGTTGCACAGCTGGCCGATCCCTGGCACGAGAGTTTCTCCATTTTGTTTCCCAGTCTTGCTTGA
Protein Sequence
MSFPRSVIITLPKGMQKTALGNEINFATSIIGGKAKVESRKMKIEEMDESTCEIVKPDEWLRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRALHEQNDLLSEECALLRTQNEALLAETQRLKSEAKNSPPNTPPTSSASSVSSVTYCESWWQNTIGTNSDPKCHGNLEDTDPLPPLEELFGDLQGDDYIVRLEELAESLLREVTAEVEANSNRPNDKDIDQKDTTEEHDNTERMVGKTSENVETSSASGGLRDPSHTESSPDCYPLVYPTPASNGATNNEIFTNPDNIITNSSNIPTHSDGNINDLPAKNLLKCEIKQEPVNNDLDTVYGTYDEATNCITIICTGEEDVAIQECVQEVSSDDSTHLTPKYSYKDNLSPGYTISDSLSPGSVHSEHDDCDYESHDEPRVERTSTVAQLADPWHESFSILFPSLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00438506; iTF_01272850;
90% Identity
iTF_01272850;
80% Identity
-