Pcon006513.1
Basic Information
- Insect
- Psyttalia concolor
- Gene Symbol
- nfxl1
- Assembly
- GCA_030522845.1
- Location
- JAPYZM010001767.1:1663-4830[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.1 2e+04 -3.2 1.1 15 19 125 129 124 129 0.81 2 19 0.0084 1.6e+02 3.5 7.4 4 18 160 174 159 175 0.97 3 19 2.8e-08 0.00053 21.0 13.0 1 19 174 191 174 191 0.99 4 19 1.6 3.1e+04 -3.8 1.4 9 13 197 201 196 202 0.76 5 19 3.7e-06 0.07 14.2 17.3 1 19 227 244 227 244 0.99 6 19 2 3.8e+04 -5.0 2.3 9 13 250 254 249 254 0.74 7 19 7.6e-05 1.5 10.0 11.3 1 19 279 298 279 298 0.93 8 19 8e-07 0.015 16.3 8.6 1 18 334 351 334 352 0.97 9 19 0.0057 1.1e+02 4.0 8.4 1 12 386 397 386 397 0.94 10 19 1 1.9e+04 -3.2 1.0 6 10 406 410 405 410 0.90 11 19 1.2e-07 0.0022 19.0 14.8 1 19 416 434 416 434 0.93 12 19 2 3.8e+04 -4.2 0.8 6 10 463 467 463 467 0.95 13 19 0.00027 5.2 8.2 8.8 9 19 482 492 480 492 0.90 14 19 0.004 75 4.5 6.7 1 12 502 512 502 512 0.95 15 19 0.85 1.6e+04 -2.9 5.8 14 18 543 547 543 548 0.89 16 19 2.9e-06 0.055 14.6 6.4 1 12 584 595 584 595 0.96 17 19 0.59 1.1e+04 -2.4 1.8 6 10 609 613 608 613 0.89 18 19 0.0006 12 7.1 15.9 1 19 621 638 621 638 0.93 19 19 8e-06 0.15 13.1 10.2 1 16 683 697 683 703 0.89
Sequence Information
- Coding Sequence
- ATGAGGAAGTTCAAGAGGGCTCAGGCCCAGAACCAGGCCTCCATCGAACGACACCTGAATGGAAAAATCCTTGAGTCCTCCAGTGACGAAGAGAATGAGAGCTCTCACGAGTCACTTCAGCAGGCTGTATCCAAAACACTGTCTTCGTATGAGTTCGAAGGTGGAGATACTGAGAAAGCTCTGTCGTATCTGACGGATTTGTTTCAGTCGGGAGGGGCTGTCTGTCTCATCTGCATATCTTCGGTGAAGAAGAATGACCCGATATGGAGTTGTTCAACGTGTTACTCCTTCCTCCACCTGACGTGCATCCAGCACTGGATCCGCGATTCGCTGGCCTCGAAGCTCTCGAAGGGAATAATTCCCGTGTGGGCATGTCCAAAATGTCGTACAGAGTATCCCGAGTCCGCGACGCCCACCTCGTACCTCTGTTTCTGCCTAAAAACCCGGGATCCTCCCCCTCAGCCCTGGATAATCCCTCACTCCTGCGAGGAGAAATGCTCGAAACCCTTATGCCCCCCCTGCGGCCACTTCTGCATGCTCCTCTGCCACCCGGGGCCGTGTCCCCCGTGTCCCAAGATGGTCACGACGACCTGCCACTGCGGCAAACAGCCCCCCGAGGCCCGTCGCTGCAATGCCAAGTCCTGGAGCTGCAGAACTCCCTGCAGTAAATCCCTTCCCTGTGGCCACTCCTGCAGAATCGAGTGTCACACCGGCCCCTGCCCACCCTGTCCCGAGATCGTGCCGACCCCCTGCCACTGCGGGACCTCCACCAAATCCCTGGAGTGCTCGAAGATCTCCTGGAGATGTCTCAAAAAATGCACAACCCAGCTCAACTGCAAAATCCACACCTGCGAGGGCTTCTGTCATGCCCCCGGCGACTGCGGCGACTGTCCCGTCGCCAAAAATCGCACCTGCCCATGCGGAAAAAAACGTTACAACGTCTCCTGCAAGCAGAAGACCCTCCCCACGTGTGGGGACACTTGCGGAAAGTTGTTGGACTGCGGAACCCACTTCTGCAACATGAGATGTCATCTAGGTGACTGTGGCCAGTGCCTCGAGGTAGTCACCAAGACCTGCAAATGCGGATCCTACACCAAAGAGATATCCTGCACGAAGGAGTTCCACTGCAACAAGAAGTGCACAAACATGAGAGCCTGCGGCAAGCACCCGTGCAACAAGAAATGCTGCGACTGCACCAAAATCGGTATAAATCCCTGCGAGAAGATCTGCGAGAGCTCTCTGAATTGCAGAAAGCACAAGTGCACAGCGCCCTGTCACTCTGGCCCCTGCTATCCCTGCCCCAGGACCATAACTTTCCAGTGTCGATGCGGTAACAGCAAGATCGAGGTGCCTTGTGGGACTAAGAAGCGAATAAAACCCCCTCACTGCAACAAATTGTGCAAATTACCACCGATTTGTCATCACCCCAAGCAGGAGTCCCACAAGTGTCATCAGGGGAGCTGTCCCCCCTGCAAGAAGATCTGTCACCTGGTCTACAAGAGATGTGGCCACGAGTGTGTGGCTGTCTGCCACACGAAGgtgTGGGTGAAGGTCAGGGTGAACGGGGTGGCCCAGCCAGCAGGTCCCTGGGAGATCTCCAAAGACAGGATGGAGTTGAAGACACTGCCCTGTCCTCCTTGCGAGGTGTCTGTGATGGTGACGTGCCTGGGGGATCACGAGACCAAACCCTGGCCGTGTCACATTGCCATTCCAAGCTCGTGTGGACGTGAGTGCGGCAGAGGACTGCCCTGTGGCAATCACAAGTGCGAAGTTCTGTGTCACCGAGTGAGGGAGGGAGGAGGGGCTGGAGAGGAGTGCATGGAGTGCGAGGAGCCGTGCAAGCTGGCGCGACCCGAGGGCTGCAGCCATCTGTGCCCGGAGAGGTGTCATCCCGCGCCCTGTCCACCTTGCAAACAGCCCGTCAAGATCGCCTGCCACTGCGGGCTCAACAGCCTCTACAAGAGGTGTGTCGAGGTGACCCAGAAGAGGGGCAGGGAGAGGGAGGAGATGCTCAAGTGTGGGAATCAGTGTCCGCGGAATTACTCCTGCGGCCATCGATGCATCGACAACTGTCACCCCGGCAGCTGTCGCTCCCCAGACGTCTGCAACAAACGTGTGAAAATAACCTGCAAATGCCAAAGAATAAAGAAGAGCGTGCTCTGTACAGAAGTACAGAGTGGAAACGTGAAGATTGAGTGTGACCAACAGTGCAAGGAGCTGAAGCAGCAGAAGGAGCGCGCCCAGGAGATTGAACTCGCGAGGAAGAGGAAAGAGGAGGAGTTGAAGAATCGGAGGGAAGTGGAGAAATTCGAGAGGAAGTTCAAGCCCCGGAGGAAGGGCAAAGAGAGGGCCGAGAGTGTCGAGTGTTTggagaataataattacagGTACATCCTCCGAGGAGTTTATTTCGCTATCGTATGTATCATTGTCGCCATTGTCACATTTTACATGACCGAGAGAATGtga
- Protein Sequence
- MRKFKRAQAQNQASIERHLNGKILESSSDEENESSHESLQQAVSKTLSSYEFEGGDTEKALSYLTDLFQSGGAVCLICISSVKKNDPIWSCSTCYSFLHLTCIQHWIRDSLASKLSKGIIPVWACPKCRTEYPESATPTSYLCFCLKTRDPPPQPWIIPHSCEEKCSKPLCPPCGHFCMLLCHPGPCPPCPKMVTTTCHCGKQPPEARRCNAKSWSCRTPCSKSLPCGHSCRIECHTGPCPPCPEIVPTPCHCGTSTKSLECSKISWRCLKKCTTQLNCKIHTCEGFCHAPGDCGDCPVAKNRTCPCGKKRYNVSCKQKTLPTCGDTCGKLLDCGTHFCNMRCHLGDCGQCLEVVTKTCKCGSYTKEISCTKEFHCNKKCTNMRACGKHPCNKKCCDCTKIGINPCEKICESSLNCRKHKCTAPCHSGPCYPCPRTITFQCRCGNSKIEVPCGTKKRIKPPHCNKLCKLPPICHHPKQESHKCHQGSCPPCKKICHLVYKRCGHECVAVCHTKVWVKVRVNGVAQPAGPWEISKDRMELKTLPCPPCEVSVMVTCLGDHETKPWPCHIAIPSSCGRECGRGLPCGNHKCEVLCHRVREGGGAGEECMECEEPCKLARPEGCSHLCPERCHPAPCPPCKQPVKIACHCGLNSLYKRCVEVTQKRGREREEMLKCGNQCPRNYSCGHRCIDNCHPGSCRSPDVCNKRVKITCKCQRIKKSVLCTEVQSGNVKIECDQQCKELKQQKERAQEIELARKRKEEELKNRREVEKFERKFKPRRKGKERAESVECLENNNYRYILRGVYFAIVCIIVAIVTFYMTERM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00439148;
- 90% Identity
- iTF_00438436;
- 80% Identity
- -