Basic Information

Gene Symbol
-
Assembly
GCA_030522845.1
Location
JAPYZM010004110.1:3379-6331[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00036 0.59 11.3 0.0 3 43 224 272 224 275 0.81
2 2 0.00033 0.55 11.4 0.1 1 46 301 357 301 357 0.86

Sequence Information

Coding Sequence
ATGTCACTATTTAATTATGAGTTGTTTACTATAAACGGCTATCCCATGAAATTCTATCTGGATGGATACACAGATATTCAGATTCGGGAAACAGCTGCGATTGTTGAGGCTTTTGGTGGAATCTTCTCCGGACCGGGAGAGAATactatcattttttcataccCTGGAGCTTCCAGCAGCACAAATTGTGATCGGTTTGACAGCAAATTTCTTTTCGACAGTGTGACTACAGGACATCTAGCAAAATTGGATTATTATAGGCTTCCATTGGCTGAAGTTCGCACAGAAATCAAAGTGGAAGAAGATTGCGGTCGAAGTCATCGTGGAAAATTTGCAGCAGCGACTCCTAAGTTGACTCAGTCTGAAGAGGTTTCCGAAATATCCAACTCTCCAAATGACCTCAATAAACCATCGTCGTCAGCTGTACCACAGGCGTCCGCTGGCATATTCAATTGCATCTCCAAGAGTAAAAAATCGGGGAATGATTCGATTGATGCAATTCCTTCTACATCAGGGGAGACATTAAGAGAGGTCATGCATGACAAAAAGACGCGGTCCAAGTCTCCTTCACGTGAAGATGAAAATCACGAGCAGAAGAAGAATTCTCCTTTGAGGGACAATGAAAATCCTGAGGGAACTAAGAGTAAAAAACGTATCATTGATCTCATTCCCTACTCCAAGGAAGAATCTCTAAAGCTGTTGGAATATATATCTGAGAACAAGACACCAGGTGTCGATATCTGGGCAGCGGTGGAGAGAGCAAACATCTTCGTCAATCCATATCGTTCGGGATCAAGCTTACGTTCTCACTACTACGGAAAATTACGGGGTAAACTCAGGACACATTTGAAGGGTGCCTGCAAATTTGGCGAAATCGCAAAGCCGGCCAAATATACGCTGAAATCGAGATATTCGCGAGAGGACgatcaaaaaattatggactacataataaaagaaaaactaattgataACGTCGGATCGATAACAGCTTGGAAGCAAATTGAAACGGAAAATATCCTAGTTCCGCCTCGTTCGTGGACAAGTTTGAGAAGCCATTACAGGAATTACCTTCGATACCACGTTGCAGACTACATTGATGATCCTGAAGTGATTAGGGCCTTCGAAGAGGGAAAGAAGAGAAGGTATTTGGATTTCCTTAGACGATCATCCAAATACTAG
Protein Sequence
MSLFNYELFTINGYPMKFYLDGYTDIQIRETAAIVEAFGGIFSGPGENTIIFSYPGASSSTNCDRFDSKFLFDSVTTGHLAKLDYYRLPLAEVRTEIKVEEDCGRSHRGKFAAATPKLTQSEEVSEISNSPNDLNKPSSSAVPQASAGIFNCISKSKKSGNDSIDAIPSTSGETLREVMHDKKTRSKSPSREDENHEQKKNSPLRDNENPEGTKSKKRIIDLIPYSKEESLKLLEYISENKTPGVDIWAAVERANIFVNPYRSGSSLRSHYYGKLRGKLRTHLKGACKFGEIAKPAKYTLKSRYSREDDQKIMDYIIKEKLIDNVGSITAWKQIETENILVPPRSWTSLRSHYRNYLRYHVADYIDDPEVIRAFEEGKKRRYLDFLRRSSKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-