Pgib013470.1
Basic Information
- Insect
- Psococerastis gibbosa
- Gene Symbol
- nfxl1
- Assembly
- GCA_963971405.1
- Location
- OZ020488.1:14662291-14671834[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.9 2.4e+04 -4.0 1.1 14 18 135 139 135 139 0.81 2 21 2 2.6e+04 -5.1 1.9 15 19 179 183 179 183 0.85 3 21 0.15 1.9e+03 -0.5 0.8 4 10 213 219 212 219 0.95 4 21 3.1e-08 0.00039 20.9 17.0 1 19 227 244 227 244 0.99 5 21 2 2.6e+04 -4.7 1.8 6 10 270 274 269 274 0.50 6 21 3.8e-05 0.49 11.0 14.4 3 19 282 298 280 298 0.93 7 21 0.58 7.4e+03 -2.4 0.9 5 10 322 327 322 327 0.94 8 21 4.2e-07 0.0054 17.2 15.5 1 19 333 351 333 351 0.99 9 21 0.94 1.2e+04 -3.1 0.9 5 10 375 380 375 380 0.93 10 21 0.00037 4.7 7.8 11.7 1 15 386 400 386 402 0.93 11 21 0.42 5.3e+03 -1.9 0.5 1 5 412 416 412 421 0.82 12 21 0.00017 2.2 8.9 14.8 1 18 437 454 437 455 0.92 13 21 1.4e-08 0.00018 21.9 11.6 1 19 464 482 464 482 0.98 14 21 0.0007 8.9 6.9 4.6 10 19 531 540 528 540 0.91 15 21 0.04 5.1e+02 1.3 6.0 3 12 551 560 543 560 0.78 16 21 0.94 1.2e+04 -3.1 3.4 14 19 589 594 589 594 0.88 17 21 5e-06 0.064 13.8 5.2 1 11 630 640 630 641 0.96 18 21 2 2.6e+04 -4.3 2.1 15 18 655 658 654 662 0.68 19 21 6.4e-05 0.82 10.3 12.1 3 18 671 686 670 687 0.91 20 21 2 2.6e+04 -4.4 1.8 15 19 722 727 721 727 0.59 21 21 8.7e-05 1.1 9.8 12.1 1 18 732 751 732 752 0.87
Sequence Information
- Coding Sequence
- ATGTCTGGGCGAGGCAGAGGCAAATCACAAAATCCATGGACAGTCAGCAGTAAAGGAAGACCATCTGAAACTGCAAAGAAATCTGGCGGAGGTAATGGATGCAATGCTAAGAATGGAAACCCAACAATTGACAGTGTAGAGCAGCGATTTGAGAGAGAAAGACAAAAGCTGCAAGCTTCTGTAAAAAAACATGTCAACGAAACGAAGTATGATTCttcagaagaagaggaagaagacacTGCTGTATTTTCTAAGGTCTTCGAAAGCGTCATTAATAACTACTGCCAAGTCGGTGGAGGTGATCTGGGAAAAACGCAGACCTTTTTAGAAAACTCCTTTCAGGCAGGGGCAGGTATTTGCCTCATTTGTATTTCACACGTCAAAAAAGCTGATGCTGTCTGGAATTGCCAAGAATGCTTCGGATCATTTCACATGAATTGCATTCAAAAATGGTCAAGGGACAGTATTTTTCATCAAAAGCAAGCTTTAGAAGAATTGCCAGTATTCAGAAGAACTGTCTCTGTAACTTGGGgatgcCCCAAATGTCGCTTCGCATACAGCGAACAAAAAGAATGGCGGTACTTTTGCTTCTGTGAAAAAGCGGAAAACCCTTCACAGCATCCATGGCTGATTCCCCACTCATGTGGCGAAACTTGTGATAAACCCATCCAACCCGAATGTGGTCATAAGTGTTTACTTCTTTGTCATCCAGgGCCATGCCCACCGTGCCCTAAGATGGTGAAGATGAGCTGTCATTGCAGCAAAAGTAATCCGGTTCCACGTCGTTGCAGCGATAAGCTATGGTCATGTCATAAGCCTTGCAAACAACTACTTAAATGCAAAAAACATGAATGTGGTGATACGTGTCACTTGGGAGAGTGTTCACCCTGCCCGCGCCAAAGTATGCAGACCTGTGACTGCGGGGGCAAAACAGTTTTACGAGCGTGTTCGGTACCATCTTGGAAATGTGACAAGgtGTGCGGTAAGCCTTTCAGCTGCGGCCATCATTCCTGTGACATTGTCTGTCATGCAGGCCCGTGCGGAGACTGTCCACTTTCACAAATGCGAACTTGTCCTTGTGGTAAGACTTATGTGGAAATCGCTTGCACTGCTGAGGTGCCTACCTGCAATGACACCTGTAACAAACTCATGGAGTGCGGTGTTCATCGATGCCAGCTCAAGTGCCACAAAGATAAATGCGCGTGCTTGGAAATCATTGAAAAGGTCTGTCGTTGTGGTCTCCATAAGAAAGAAATTCCCTGCATTAAAGAATACTTATGTGGAACCAAATGCAAGAAGTTCAAGTCATGCATGCGCCACCCGTGCAATCGTAAGTGTTGCGATGGGGTCTGCCCACCGTGTGAGAAACCCTGCGGACGGACGCTTCCTTGTGGAACGCACAAATGCCCTTCTATTTGTCATCGTGGAGCTTGCTTTCCGTGCCAAGTCATCGCTTCGGTGAGCTGCCGCTGTGGGAGTACGGCGATTTCCGTCCCTTGCGGTCGAGAGAGGCGTACCAAGCCCCCTCGATGCAAGTACCAGTGCAAAATTGTCAGTGAATGCAAGCATCCTACGCGAGAGGCCCATCGCTGTCATTTTGGAATGTGTCCTCCTTGTCGCCAGACTTGTGGTAAACCGCGAAATAGCTGTCAGCATCCATGCCTAGCCCCTTGCCATTCTGCCGTTTGGCTGAAAAGAGAAGATGAGCGTCGACCTGCTGGTCCCTGGGAAGTCTTCGAACCTGAGTACACCAGAACAGATCTACCTTGTGAGCCATGTACTGTGCCCATGTTAGTGGCCTGTCTCGGGTTGCATGAGCAGTCGAACTGGCCGTGCGGCCAGGCGACTCCCTCGTCATGTGGGCGCCCCTGCGGCAGACAGCTACAATGTGGCAACCACAAGTGCTCGCTACCCTGCCACGCTGTTGAGGAGGCACCGGATGAAAAGAGCTGCGGAGTAAACTGCCAAGCTTGTGAAGGGGAGTGTTTGAAACCTCGACCTACCGGCTGCACTCATCGTTGCAAACGGCCCTGCCACGCGGAAGACTGCTCTCCTTGTCTTATTAACACTAAAATTAAATGTCATTGTGGCATTGTTACTTTGTACGCGTCGTGCTGCGACTTGACGACGACTGACTCCAAAAAGAAGGAAGACATTTTAAGCTGCGGCAACCCATGCCCAAACAGTTATCCATGTGGTCACAAATGTCGCGGCAATTGTCATCTGGGTCCTTGCCCAGACGCAGATAACTGTCGCCGCAAAGTTAAACTAGCATGCAAGTGTGGACGGCTCAAGAAAGACATGACTTGCGATATCGTGAGGAAAGGAGGCGGGAAGTTGGACTGTGATTCTGCCTGTGAAGCTAAACAGGAAGACATGCGAAAGgttaAAGAAGCTGAATTGAGAAAGAAAAAGGAGGAAGAGGACAAGAAGAACAAGGAAGAATTGGCGAAATTTGAAAAGAAATTTGCGGGAAAGAAGAAAGAGAGGGAAAGGCGGAAATATATTGAAGAGGAAAAACAGTCTGTTTTTTCTAAATACTGGTGGATGGCTCTACTTCTAGCAGGAGCGGCATCTTCTGTttcattttactttatttttcaaTAG
- Protein Sequence
- MSGRGRGKSQNPWTVSSKGRPSETAKKSGGGNGCNAKNGNPTIDSVEQRFERERQKLQASVKKHVNETKYDSSEEEEEDTAVFSKVFESVINNYCQVGGGDLGKTQTFLENSFQAGAGICLICISHVKKADAVWNCQECFGSFHMNCIQKWSRDSIFHQKQALEELPVFRRTVSVTWGCPKCRFAYSEQKEWRYFCFCEKAENPSQHPWLIPHSCGETCDKPIQPECGHKCLLLCHPGPCPPCPKMVKMSCHCSKSNPVPRRCSDKLWSCHKPCKQLLKCKKHECGDTCHLGECSPCPRQSMQTCDCGGKTVLRACSVPSWKCDKVCGKPFSCGHHSCDIVCHAGPCGDCPLSQMRTCPCGKTYVEIACTAEVPTCNDTCNKLMECGVHRCQLKCHKDKCACLEIIEKVCRCGLHKKEIPCIKEYLCGTKCKKFKSCMRHPCNRKCCDGVCPPCEKPCGRTLPCGTHKCPSICHRGACFPCQVIASVSCRCGSTAISVPCGRERRTKPPRCKYQCKIVSECKHPTREAHRCHFGMCPPCRQTCGKPRNSCQHPCLAPCHSAVWLKREDERRPAGPWEVFEPEYTRTDLPCEPCTVPMLVACLGLHEQSNWPCGQATPSSCGRPCGRQLQCGNHKCSLPCHAVEEAPDEKSCGVNCQACEGECLKPRPTGCTHRCKRPCHAEDCSPCLINTKIKCHCGIVTLYASCCDLTTTDSKKKEDILSCGNPCPNSYPCGHKCRGNCHLGPCPDADNCRRKVKLACKCGRLKKDMTCDIVRKGGGKLDCDSACEAKQEDMRKVKEAELRKKKEEEDKKNKEELAKFEKKFAGKKKERERRKYIEEEKQSVFSKYWWMALLLAGAASSVSFYFIFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -