Pgib007569.1
Basic Information
- Insect
- Psococerastis gibbosa
- Gene Symbol
- stc_1
- Assembly
- GCA_963971405.1
- Location
- OZ020486.1:11783731-11799530[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2 2.6e+04 -4.2 0.3 9 11 224 226 223 226 0.82 2 17 1.7 2.2e+04 -3.9 1.6 15 19 249 253 248 253 0.81 3 17 0.7 9e+03 -2.7 4.3 4 10 282 288 280 288 0.89 4 17 3.6e-06 0.046 14.2 18.3 4 19 298 313 296 313 0.94 5 17 4.3e-09 5.5e-05 23.6 12.0 1 19 349 367 349 367 0.98 6 17 1.8e-10 2.3e-06 28.0 12.1 1 18 407 424 407 425 0.98 7 17 1.1 1.4e+04 -3.3 1.0 5 10 458 463 458 466 0.67 8 17 1e-07 0.0013 19.2 14.3 1 19 469 491 469 491 0.89 9 17 1.2 1.5e+04 -3.3 2.0 5 10 519 524 519 524 0.93 10 17 0.034 4.3e+02 1.6 11.0 1 11 530 540 530 541 0.96 11 17 1.4 1.8e+04 -3.7 0.3 4 10 545 551 545 551 0.82 12 17 3.4e-09 4.4e-05 23.9 14.1 1 19 557 575 557 575 0.99 13 17 0.62 7.9e+03 -2.5 1.0 5 10 603 608 603 608 0.91 14 17 2 2.6e+04 -4.8 11.3 2 19 615 632 614 632 0.81 15 17 0.2 2.6e+03 -0.9 1.0 8 13 637 642 636 643 0.84 16 17 3.3e-07 0.0042 17.6 11.2 1 16 668 683 668 694 0.86 17 17 0.00039 5 7.7 15.8 1 19 700 719 700 719 0.97
Sequence Information
- Coding Sequence
- ATGAGTCGCCGACGAGAAAATAGACAAGACGACCCAACAGCCAATTCTAATCTTAAGGCAACAGCTCAGGAATTCGTACCTCGACCCCCCTCCAATCACCATTCCTCAAGAAATTTGTCGCATCACCACCGGGAAAGTGATAGCGATCGTCCCTCAACTTCGAACAATAATTTTGATACACGGCCACCGAGAAATTACGAACGGCATCAGTGGAGGTCAAATGGCGGGCATAGAAATAATAATGACAGGGATAATGTAGGTGGGCCTTCTCGAGATGTCCCTAGAGATTTTGATAGACAAACCTCTTGGCGTGAGCGCAATGCCAATCAGCATCGTGGCCCATCGCAGAATGGTGAAAATTACAGAGGTTACAGAAACCGTCCAACAAAGGTGAATGGCGATAGTTTTGACAGCGCACCACAGGCTCATTACAAGAGTCGTTCGAATGATTTAGATGGACATTTAGAATCCGATCGAGGGTCAAAGAGTTTCTCATTTGAGTACCGTCCCCGTCAGCAGAACAATTTTAAGCCTAAAAATGGATACGTGAAGAAACTTGAAGGTAAAAATCAAATGGAGGTATTGATAAATTTACTAACAAAAGGCGCCTTAGAATGTCTGGTTTGCTGTGAGCATGTTAAGCAGTCGGAATCAACTTGGAGCTGTAACGTGTGTCACCACGTTTTGCATCTTCGTTGTGTAATGAAGTGGGCTCGTGCATCTGGAGCAGACGAGGGATGGCGTTGCCCTGCATGCCAGCACGTATCTAGAACAATACCTAGAGAGTACCGGTGCTTTTGTAGGAAAACTCAAGACCCGGCGTGGAACAGAAGTGACTGCCCCCATACATGTGGTGCTACTTGTGGCCTGCCCCGCCCAGAGCCTTGCCCGCACAGGTGTACTCTGCCATGTCATCCGGGTCCGTGCCCACCGTGCAGACTCTACCAGTCGCGTTCATGCGGCTGTGGGCGAGCGACTAAAACGGTGCAATGTGCTGAGGTGGAACCAGTGCTGTGTGGCGCTCCATGCAGCAAATTGCTCAATTGTGGGGAACATAAATGTGCTGCCTTATGCCATGTTGGCGAATGCACTCCTTGTCAGGAATTAGTTGAACAAGTTTGCTTCTGCGGGGGCTCGAGCCAAGTAGTGGAATGTACTCAGTCATCAGTTGGCGTTTCAACGTTTTGCTGTGGAAAAACGTGCCAAAAGAAACTGGCGTGTGGTAACCATGACTGTCAGCTCATTTGTCATGAAGGGGATTGCCCGCCGTGTGTTTTGCTGGCCGACACTGTCACGGTGTGCCCCTGCACCAAAGCCATTCTCAGCCAACTCTCCGCACCGCCGAGAACTTCCTGCCTCGATCCAGTGCCAACTTGTGGAGAGACCTGCGAGAAAACGCTTCATTGTGGAGAGCCTGGCAACCGGCATAAATGCCTCAACTTCTGCCACGAAGGCCCGTGTCCGCCGTGTCCCGGGGAGACGATGGCTCGTTGTCGCTGTGGTCATCTGAATAAACCGCTGCCATGTGAGGAACTTGATGCTACAGATGAAGTCCGCTGTGAAAAGAAGTGCAATAAGAAACGCAGCTGCGGGAAACACAAGTGTCACGAGGCATGCTGCATTGACCTGGACCATATGTGCATGCTGCCGTGTACGCGTACCCTCTCCTGCGGTCTCCACCGCTGTGAGGAGCCCTGCCACACGGGCTACTGCCGTCCCTGTCCACGAGTCAGCTTTGAAGAGTTGCCGTGCGAGTGTACAGCTCAAGTTCTTTTGCCGCCTGTGCCTTGCGGTACGCGTCGTCCCAAGTGCAGCCGGCCTTGCTCACGGCCTCACCCGTGTTCCCACACGCCGACGCATTCTTGTCACTCTGACGCCGAGTGCCCTCCGTGCACTGTTCTGCTGTCACGCTTGTGCCACGGTGGCCATGAGTTACGTAAGACGATTCCGTGCCATCAGCTGGCTTTCTCCTGCGGTCTGCCTTGCGGTAAGCCCATGCCGTGTGGACGTCATACCTGCATCCTGCCCTGCCACGAAGGTCGGTGTCTGCGTCCCGACCAGACCTGTGTTCAGCCCTGTAGCCAGGCGCGGACTGTTTGCGGACATGCCTGCACCGCGCCCTGTCACGAGCCCCCGTGCCCGGACACACCTTGCAAGGAAATGGTGAAGGTGACTTGTGAGTGTGGGCACAGATTCTCGACCCGTTCCTGTGTGGACAACGCACGTGACTACCATCGGATCGAGACTGCCCAATTGGCATCCAAAATGGCGGATCTGGCTGCCGGACAAAGTATTGATTTGATTGATGTTGCCGCTACAAGCAAGAAAATGTCCTTCAAAACGCTGGAGTGTACCGAGGAGTGTAAAGTCATCGAGAGAAACCGCCGATTGGCTATCGGACTGCAAATACGCAACCCGGATCTAACCGCTAAGCTAACACCCAATTATTCCGAGTTCTTGCGACTTTGGGCCAAGAAAAATCCGCACTTTTGCCAAGTGGTGCACGACAAACTGTCGGAATTAGTTCAACTTGCAAAACAGtcGAAACAAAAATCGCGGAGCTTTTCTTTCGAGCCAATGAACCGGGAAAAGAGGCAGTTCATACATGAATACTGTGATCATTTTGGATGTGACGCTGTCGCGTACGACCCCGAACCACAGCGCAACGTCGTTGCTACTGCGTACCGTGATAAGTCATGGCTGCCGGGAGTGTCGTTGCTGGAATTGATACAGCGAGAAAATGGAACAAGGAAAGTTCCGCTTCCCAGCAATGCCAGAATGGGGCCAACGCAGAGGTAA
- Protein Sequence
- MSRRRENRQDDPTANSNLKATAQEFVPRPPSNHHSSRNLSHHHRESDSDRPSTSNNNFDTRPPRNYERHQWRSNGGHRNNNDRDNVGGPSRDVPRDFDRQTSWRERNANQHRGPSQNGENYRGYRNRPTKVNGDSFDSAPQAHYKSRSNDLDGHLESDRGSKSFSFEYRPRQQNNFKPKNGYVKKLEGKNQMEVLINLLTKGALECLVCCEHVKQSESTWSCNVCHHVLHLRCVMKWARASGADEGWRCPACQHVSRTIPREYRCFCRKTQDPAWNRSDCPHTCGATCGLPRPEPCPHRCTLPCHPGPCPPCRLYQSRSCGCGRATKTVQCAEVEPVLCGAPCSKLLNCGEHKCAALCHVGECTPCQELVEQVCFCGGSSQVVECTQSSVGVSTFCCGKTCQKKLACGNHDCQLICHEGDCPPCVLLADTVTVCPCTKAILSQLSAPPRTSCLDPVPTCGETCEKTLHCGEPGNRHKCLNFCHEGPCPPCPGETMARCRCGHLNKPLPCEELDATDEVRCEKKCNKKRSCGKHKCHEACCIDLDHMCMLPCTRTLSCGLHRCEEPCHTGYCRPCPRVSFEELPCECTAQVLLPPVPCGTRRPKCSRPCSRPHPCSHTPTHSCHSDAECPPCTVLLSRLCHGGHELRKTIPCHQLAFSCGLPCGKPMPCGRHTCILPCHEGRCLRPDQTCVQPCSQARTVCGHACTAPCHEPPCPDTPCKEMVKVTCECGHRFSTRSCVDNARDYHRIETAQLASKMADLAAGQSIDLIDVAATSKKMSFKTLECTEECKVIERNRRLAIGLQIRNPDLTAKLTPNYSEFLRLWAKKNPHFCQVVHDKLSELVQLAKQSKQKSRSFSFEPMNREKRQFIHEYCDHFGCDAVAYDPEPQRNVVATAYRDKSWLPGVSLLELIQRENGTRKVPLPSNARMGPTQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -