Basic Information

Insect: Psococerastis gibbosa
Gene Symbol: -
Assembly: GCA_963971405.1
Location: OZ020486.1:19933337-19944010[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.1 3.4e+02 2.5 5.1 1 23 93 116 93 116 0.96

2 16 0.058 3.8 8.6 2.7 2 21 293 312 292 313 0.95

3 16 9.2 6.1e+02 1.7 1.4 1 23 416 438 416 438 0.79

4 16 0.062 4.1 8.5 0.0 1 23 655 677 655 677 0.96

5 16 1.3 89 4.3 0.1 1 23 685 707 685 707 0.96

6 16 0.86 57 4.9 2.5 1 23 739 761 739 761 0.96

7 16 0.023 1.5 9.9 6.0 1 23 768 790 768 790 0.99

8 16 0.00024 0.016 16.1 0.0 2 23 854 875 853 875 0.97

9 16 0.003 0.2 12.7 2.1 1 23 973 995 973 995 0.98

10 16 0.39 26 6.0 2.7 1 23 1059 1081 1059 1081 0.94

11 16 5.7e-05 0.0038 18.1 2.6 1 23 1087 1109 1087 1109 0.98

12 16 0.001 0.067 14.2 0.5 1 23 1170 1192 1170 1192 0.97

13 16 0.00018 0.012 16.5 2.2 1 23 1198 1220 1198 1220 0.99

14 16 0.64 43 5.3 1.1 1 23 1310 1332 1310 1332 0.91

15 16 0.0028 0.19 12.8 2.0 2 23 1469 1490 1468 1490 0.96

16 16 0.00026 0.017 16.0 1.2 1 23 1496 1518 1496 1518 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.1	3.4e+02	2.5	5.1	1	23	93	116	93	116	0.96
2	16	0.058	3.8	8.6	2.7	2	21	293	312	292	313	0.95
3	16	9.2	6.1e+02	1.7	1.4	1	23	416	438	416	438	0.79
4	16	0.062	4.1	8.5	0.0	1	23	655	677	655	677	0.96
5	16	1.3	89	4.3	0.1	1	23	685	707	685	707	0.96
6	16	0.86	57	4.9	2.5	1	23	739	761	739	761	0.96
7	16	0.023	1.5	9.9	6.0	1	23	768	790	768	790	0.99
8	16	0.00024	0.016	16.1	0.0	2	23	854	875	853	875	0.97
9	16	0.003	0.2	12.7	2.1	1	23	973	995	973	995	0.98
10	16	0.39	26	6.0	2.7	1	23	1059	1081	1059	1081	0.94
11	16	5.7e-05	0.0038	18.1	2.6	1	23	1087	1109	1087	1109	0.98
12	16	0.001	0.067	14.2	0.5	1	23	1170	1192	1170	1192	0.97
13	16	0.00018	0.012	16.5	2.2	1	23	1198	1220	1198	1220	0.99
14	16	0.64	43	5.3	1.1	1	23	1310	1332	1310	1332	0.91
15	16	0.0028	0.19	12.8	2.0	2	23	1469	1490	1468	1490	0.96
16	16	0.00026	0.017	16.0	1.2	1	23	1496	1518	1496	1518	0.99

Sequence Information

Coding Sequence: ATGGGGAAGATAGGTCACTTGATACCCCTACTCTCCATGTCTCCGTTTAATAGGATGCATCACATGAAATCCGagattcaatatttattttttgattttctaCAGAGCACCAATTTCGATGACGATGATGAAGAGCCAGACCTTAACGCCGATCTTCCAAGCAGACTGCAAACAGCTCTGAAACGCCCTCTTCCCACTAAGACGGCTAATAACGGTTCAAATTTGGCTCAGCCCGGCCAAGTCACCTTATTGGCAAAACCTACACCTGTGAAAAACCACAAGTGTAAATTTTGCAGCTACAAGGCCACGTTCCCTCATGAAATCAACCGTCATGAAAAGAGAGTTCATGCAAAACTCGGAAAACGACCTCCACCAAACCTTATTCCCATTCAGGGTAAAGCTGCTTCACCTATCCTCAAAATACCGGAAGTTCGGGGGAAGCAATTACAACCGGAAGAACCTACCCCACCGGTAGACGAAGAAGAATTCAACAAGTTATGCAAGAAGTCAAGTCTTACAAGTTCTTTGAAAGAATTCGTTTCGTTGATTGGGGATGAAGATGGGTTAAAAACTATTCCCGATAACAGCGATGATGATGAATTATTAGAGCCTGAAGCTAAAGTTAGGAAACTGGTTGATGATAATAATGATGATGGTAACGATAAAACTCAAACTGATAtgctaaaaaagaaaaatgcctCATTTTTTGAGAAGTTGAAAGAAAAGCTTATTAATGGAGGCAGTCAAGAAGAGAATCTGGAGTGTGACTTGTGCGGACATGAATCGAAGTGTCTGTCGGAATCAATTTCCCACGAGAAGCGGCATGAGGCTGAAAAAGAAGAACTCGTGTTATCGGGCGCAGAGCTGTCATCCACCAGGTGTCAGCACTGTCGACAGAGATGTAAGACCAGCGCTGACCTCGTGAATCACTTGAAGGCCTGTTCTGCGTTTGAAGCGGCTTATGGCAGTGTCGCAACGAAGTTAGAACCAAAGGAGGAAGAGGACGAAGAGGAGCAAGACACTGCGGCGGAAAATAGAGTGTTTGTTTGGACTGAACTTCCGTTGCCAAACATTGGAGATGTCCCCCAAGAAGATGCTGAAATAGACTATAATTTGGAAACGATTCCTGAATGCTCTGTAGAATTGACAGAAGGCGAGTCGCCTCCACCTCGACTGGCACGGGCACCGAATTTGCCGCCTTCCCAAGGACCTGTCTCAGTAACCAAACCAACTGTAAAGAAAGTGTTCAAATGCCCGCACTGCTCGTTCTGGGCTTCAACTGCGTCACGTTTCCATGTTCATATAGTGGGACATTTGAACAAGAAGCCATTTGAGTGTTCCCTATGCAGCTACCGCAGTAACTGGCGCTGGGATATCACCAAGCACATCCGGTTGAAGTCCGCAAGGGACCCCAGTCATGCTCAAGCAACAGTGAATATGACAGATGAGACAGGCCGTCGCAACTATTCCAAGTACAACAAGTACCTCACTATGATGAAGGTCACTGAACCAACTGCTGATAGCAGTGGGACGGGGCGCAGAACCAGGGCCTGTGAGGCGACACAGGGAACTGTGTCGGAGAGTGACATCCTTCAACCCATGCCGGTGCTACCACAGCTCACCAGGGCCCCAAACCTCCACAGCAGTGCATCTGGACCGCAAGGCTCTTCAGATCTTCGTCCTCCCCCTCCATTGCAAGCTGCTAATAGGGAAAGCGCCACGAAGAGAACGCTTTGGAAGTGCAAGAAATGCCTTTACAGGAACTCTGATAAGGAAAAAGTGCTGACCCACGTGAAATCGCATTACGGGAACAAGAATGATTTTTCCAAGGAGAGTAAAAACGAGAATCATGAATATTTGAATGTGAACGGCGTGCTTGAATCGGCAGCAGAGAATGAGGAATCAAGTTTGCCCACTGAAGACAACCCAACTGCGGTCTCTCTCAGCGACGTGCAGCCTCCTTTTTCTTGTGGCATCTGCCCATTCACAGCTGAATCTGCTGGAGACCTAACTGCTCACAAACTGAATCATGTAGATCGGCCAGGCTCCATCTTTAAATGTACTTTCTGCCCATTTTACGTTCCAAGCAAGATTGCTGTACTAGAACATATGGACATACATTGGACAGAAACAGGTGGAGACCTCTCTGCACTCAAATGTGACAATTTCGAGCCAGAAGAATGTGTTAAAGGGGATGCTGAGACCACTAAACGGTACACCTGCCGAGAATGTCCCTACATCAGTAACAGCAAGAATCAATTCCTGTATCATAAACAATTTCACAGACCTCGTGACACTCCCTTTAAGTGCATGTACTGCACCTACAACGTCTCACGAAGACATTTGCTGCACCAACACCTCCGCGTTCATAACACTTACAAAACTTCTGACTCACCGATGGAAACTGATGCTTCTGAGGACTCCAGTGACGTTCCAATAGTCTGGATCAACCGTGGTGGTTCTCTTTTAAAAATGTATAGATGTCGCTGGTGTAACCATGTAGGCCTACGCTTGGAGAACATTCTAGAACATGAAAAAATTCACCAAAACTCTAAGCTTCCGTGTCCTAACTGTGATTTAACCTTGGAGAGTCCTAGCGAATTGTCAGCGCATATCAAAACGCACCTTGCTTATTCAGAAGATTCAGTCACCGCTGACAATGAAGTAAAAGTTGAAGGTATTCCCCCTAATTCTGCTCTGGCCGAACCTGAGGTGTTGATCAAAGTCGAGGAAGCTGAAAGGGAGGCTTGTTCAGCAGAAAGCTCGTACTATCAATCTTGTAATGTTTTGGACGAGTTTTCTGATATGGATGATGCTAGTTCGAAACTTGTTCATTTCTGTCATAAATGCCCTGCTCGTTTTTTACATCAAAAAGAACTGGGCATACATTCCAAATTTCACTTGATTCGTCTTCCTTTCAAGTGCGAATATTGCTCGTATACTGCGCGACAAAGGCCTCATCTACTGGCACACTTTAGGGTCCACAATCAAGAATACCAAGAGCGAACAGCTGCTTTAATTGACACTTACATGATCTCAGCGGATTATCAGCGGCCTAAGACTGCAATGGTTATGAAAGAGTCAAACCTTATTGATGGCCCTGTGTGGACCGTCATATCATCTGAAAATATGATTGGTTCGTCAGATAAAAAGAATAGTAAGCCGAAAGCTAAACACGCTTGCCATCGCTGTCCCGCCAAGTTCTTTAAATCAGTTGCCCTACAATACCACCTGACCCTTCATGGAGGCTCACATCAACACAAGTGCAAGTATTGTGACTATACAGTTAAAACTTATGGTAACTTAATCAAACATCAACTGGTTCACGAGACAGGGGAAGTGAAGAATAGTGCACCTTCGCCGATTTACGAATTCAAGTCTGATACAGATGATGGTTCGCAGAGTCCTTCAAAAAAGCCTGACGCACAGTTCGGCACGTTAATGCACGGCTCGCCTGATTTTATTTACCCGACATACGTAAAAAATGGAAAGCTTCGTGAAAAGAGATACAaatgccccaagtgcccatctGCCTTCGAGAAAAGAGACCAGTATCGAGTTCATTTGTCTTTGCATGGATCCAGGCAGAGATACAAATGTGAGAAGTGTGACTACTCTGTAAAGTATTACGCTAACTATATTCAGCACATGAAGAAACACCAGCACAATGAGCAAGCCCACGAGTCTCTACAGCAAGATTCTAAGGAAATAAAATTGGATGCGTTTGGTGAGTTGTTCCCGTTCCCAGCCGTGCAACTCACAATGATTGAGAAACAAACGTTACTGCTAGATAATAGACGCAAATTGTTTAAAGCTGAAGACAGTAAGCAGTATTTTTGTGAATGTTGTCCGTACATGTCTCTTCGGAAGGATTGGCTGGATAACCACGAACGACGTCATTTTCAACTCTCTGGCGTTAAGTATGCATTTGAATGCGCTCACTGCGATTACTCGACATCACAGGAAAATTTTATCCTAGAACACTCCAAGATTCATTTTAGGCCAATTTATCGGCACTTTCCGGAAGCCTTCCTCAAAGCCGAAATGATGGAAATTTGGTCAATGGATGAAGCTTTGCCTGACACTACGATGGCCATTTTTCAAGACTTAGGGGAAGGCAAGGATGAGAGGTTTCAGCCACTCATTCCTAATGAAGATGATATTAACGGGAAAGAATTGGAAGAAGAACAGAAATTGTACATAGACCCTAGCAAATTTGAGCCCTTGATGGATGACGAGCTTATCTCGGAAGATTTGGACGCAGAAGTGGAGCCTGCCAGCAACCTTACTGCCCCTGAGGAGCTGGTTCAAGGTGAAGTCGATGGAGAGGATCTCATAGAAATGGTACAAGTGAAAATTGAGTCTAACAGACCTAAAGTGAAGAGACTGAGGGGTAAAAATTGGCGCTGCAAAAAATGTCCGCATGCGTTTGGCAAAAGGGACCAATTCATGAGACATATATCCCTACATGGCTCCCTGCAAAGATACAGCTGTGATATCTGTGATTACTCCGTCAAATTTTATACCAATTATGTTCAGCATATGCGTATGCACCAAAGTCATGAACCCGACAGGCTTGTTCTAATTAAGCAGTACGTTGCTAGTCCTGACGGTGGTAGATTGCAAGAGGATGATCCATCTACCTGTCAGTAA
Protein Sequence: MGKIGHLIPLLSMSPFNRMHHMKSEIQYLFFDFLQSTNFDDDDEEPDLNADLPSRLQTALKRPLPTKTANNGSNLAQPGQVTLLAKPTPVKNHKCKFCSYKATFPHEINRHEKRVHAKLGKRPPPNLIPIQGKAASPILKIPEVRGKQLQPEEPTPPVDEEEFNKLCKKSSLTSSLKEFVSLIGDEDGLKTIPDNSDDDELLEPEAKVRKLVDDNNDDGNDKTQTDMLKKKNASFFEKLKEKLINGGSQEENLECDLCGHESKCLSESISHEKRHEAEKEELVLSGAELSSTRCQHCRQRCKTSADLVNHLKACSAFEAAYGSVATKLEPKEEEDEEEQDTAAENRVFVWTELPLPNIGDVPQEDAEIDYNLETIPECSVELTEGESPPPRLARAPNLPPSQGPVSVTKPTVKKVFKCPHCSFWASTASRFHVHIVGHLNKKPFECSLCSYRSNWRWDITKHIRLKSARDPSHAQATVNMTDETGRRNYSKYNKYLTMMKVTEPTADSSGTGRRTRACEATQGTVSESDILQPMPVLPQLTRAPNLHSSASGPQGSSDLRPPPPLQAANRESATKRTLWKCKKCLYRNSDKEKVLTHVKSHYGNKNDFSKESKNENHEYLNVNGVLESAAENEESSLPTEDNPTAVSLSDVQPPFSCGICPFTAESAGDLTAHKLNHVDRPGSIFKCTFCPFYVPSKIAVLEHMDIHWTETGGDLSALKCDNFEPEECVKGDAETTKRYTCRECPYISNSKNQFLYHKQFHRPRDTPFKCMYCTYNVSRRHLLHQHLRVHNTYKTSDSPMETDASEDSSDVPIVWINRGGSLLKMYRCRWCNHVGLRLENILEHEKIHQNSKLPCPNCDLTLESPSELSAHIKTHLAYSEDSVTADNEVKVEGIPPNSALAEPEVLIKVEEAEREACSAESSYYQSCNVLDEFSDMDDASSKLVHFCHKCPARFLHQKELGIHSKFHLIRLPFKCEYCSYTARQRPHLLAHFRVHNQEYQERTAALIDTYMISADYQRPKTAMVMKESNLIDGPVWTVISSENMIGSSDKKNSKPKAKHACHRCPAKFFKSVALQYHLTLHGGSHQHKCKYCDYTVKTYGNLIKHQLVHETGEVKNSAPSPIYEFKSDTDDGSQSPSKKPDAQFGTLMHGSPDFIYPTYVKNGKLREKRYKCPKCPSAFEKRDQYRVHLSLHGSRQRYKCEKCDYSVKYYANYIQHMKKHQHNEQAHESLQQDSKEIKLDAFGELFPFPAVQLTMIEKQTLLLDNRRKLFKAEDSKQYFCECCPYMSLRKDWLDNHERRHFQLSGVKYAFECAHCDYSTSQENFILEHSKIHFRPIYRHFPEAFLKAEMMEIWSMDEALPDTTMAIFQDLGEGKDERFQPLIPNEDDINGKELEEEQKLYIDPSKFEPLMDDELISEDLDAEVEPASNLTAPEELVQGEVDGEDLIEMVQVKIESNRPKVKRLRGKNWRCKKCPHAFGKRDQFMRHISLHGSLQRYSCDICDYSVKFYTNYVQHMRMHQSHEPDRLVLIKQYVASPDGGRLQEDDPSTCQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -