Basic Information

Insect: Psococerastis gibbosa
Gene Symbol: -
Assembly: GCA_963971405.1
Location: OZ020491.1:7992271-8010575[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.41 27 6.0 0.1 1 23 100 123 100 123 0.91

2 27 2.1 1.4e+02 3.7 1.8 5 23 133 152 129 152 0.88

3 27 0.02 1.3 10.1 0.3 3 23 308 329 306 329 0.95

4 27 8.3 5.5e+02 1.8 3.7 1 23 368 390 368 390 0.96

5 27 0.0025 0.17 12.9 1.0 1 23 494 517 494 517 0.92

6 27 0.00053 0.035 15.0 0.3 1 23 535 558 535 558 0.93

7 27 0.00046 0.03 15.3 0.6 1 23 588 611 588 611 0.93

8 27 6.7 4.5e+02 2.1 0.5 3 23 706 727 704 727 0.89

9 27 0.015 1 10.5 0.2 2 23 734 755 733 755 0.96

10 27 0.00029 0.019 15.9 0.5 1 23 763 785 763 785 0.97

11 27 0.056 3.7 8.7 0.1 3 23 868 890 868 890 0.93

12 27 0.0066 0.44 11.6 0.7 1 23 893 916 893 916 0.97

13 27 0.00091 0.061 14.3 1.3 2 23 923 945 922 945 0.96

14 27 0.029 1.9 9.6 0.1 3 21 967 985 965 986 0.93

15 27 0.056 3.7 8.7 0.2 2 21 1001 1020 1000 1021 0.93

16 27 0.023 1.5 9.9 2.2 2 22 1032 1052 1031 1052 0.94

17 27 0.19 13 7.0 0.4 2 19 1070 1087 1069 1092 0.79

18 27 3.8 2.5e+02 2.9 1.5 2 23 1159 1181 1159 1181 0.93

19 27 0.024 1.6 9.9 0.0 1 23 1189 1212 1189 1212 0.93

20 27 0.35 23 6.2 0.1 2 23 1249 1270 1248 1270 0.95

21 27 0.008 0.53 11.3 2.0 1 23 1333 1355 1332 1355 0.96

22 27 8.8 5.8e+02 1.8 0.1 2 23 1365 1387 1364 1387 0.92

23 27 0.13 8.6 7.5 1.3 3 23 1400 1420 1399 1421 0.94

24 27 5.1 3.4e+02 2.5 0.3 1 23 1425 1448 1425 1448 0.93

25 27 0.075 5 8.3 0.2 2 23 1477 1499 1476 1499 0.94

26 27 1.6 1.1e+02 4.1 0.4 2 20 1508 1526 1507 1530 0.83

27 27 0.68 45 5.3 0.3 1 19 1534 1553 1534 1553 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.41	27	6.0	0.1	1	23	100	123	100	123	0.91
2	27	2.1	1.4e+02	3.7	1.8	5	23	133	152	129	152	0.88
3	27	0.02	1.3	10.1	0.3	3	23	308	329	306	329	0.95
4	27	8.3	5.5e+02	1.8	3.7	1	23	368	390	368	390	0.96
5	27	0.0025	0.17	12.9	1.0	1	23	494	517	494	517	0.92
6	27	0.00053	0.035	15.0	0.3	1	23	535	558	535	558	0.93
7	27	0.00046	0.03	15.3	0.6	1	23	588	611	588	611	0.93
8	27	6.7	4.5e+02	2.1	0.5	3	23	706	727	704	727	0.89
9	27	0.015	1	10.5	0.2	2	23	734	755	733	755	0.96
10	27	0.00029	0.019	15.9	0.5	1	23	763	785	763	785	0.97
11	27	0.056	3.7	8.7	0.1	3	23	868	890	868	890	0.93
12	27	0.0066	0.44	11.6	0.7	1	23	893	916	893	916	0.97
13	27	0.00091	0.061	14.3	1.3	2	23	923	945	922	945	0.96
14	27	0.029	1.9	9.6	0.1	3	21	967	985	965	986	0.93
15	27	0.056	3.7	8.7	0.2	2	21	1001	1020	1000	1021	0.93
16	27	0.023	1.5	9.9	2.2	2	22	1032	1052	1031	1052	0.94
17	27	0.19	13	7.0	0.4	2	19	1070	1087	1069	1092	0.79
18	27	3.8	2.5e+02	2.9	1.5	2	23	1159	1181	1159	1181	0.93
19	27	0.024	1.6	9.9	0.0	1	23	1189	1212	1189	1212	0.93
20	27	0.35	23	6.2	0.1	2	23	1249	1270	1248	1270	0.95
21	27	0.008	0.53	11.3	2.0	1	23	1333	1355	1332	1355	0.96
22	27	8.8	5.8e+02	1.8	0.1	2	23	1365	1387	1364	1387	0.92
23	27	0.13	8.6	7.5	1.3	3	23	1400	1420	1399	1421	0.94
24	27	5.1	3.4e+02	2.5	0.3	1	23	1425	1448	1425	1448	0.93
25	27	0.075	5	8.3	0.2	2	23	1477	1499	1476	1499	0.94
26	27	1.6	1.1e+02	4.1	0.4	2	20	1508	1526	1507	1530	0.83
27	27	0.68	45	5.3	0.3	1	19	1534	1553	1534	1553	0.89

Sequence Information

Coding Sequence: ATGTTCAATCTTGAGAGTTTCTACGACTTCTACGAGACAAGTTTGCGCGCGCAGTCGAGGCTTCACGCGCAGATCATCGAGGGCGGTGGCAAGGCCGAGCCTGTGGTGCCCAAGACGGTGGCCCCCGGTCACGTGACCCCCGAGGACCTGTCAAGGCCACGGCCCCCGCCACCCCCTCCTCCGCCTCCGCCCCCGCACCCACCCCCCCTACCGCACTCACACCCCGCCATGCAGCAGATCCACCAGCAGCACCCCCTGCACCCCCCTCCTGCTCAACCCGCATCTGTTGAAAGACCATTTCCCTGTGACCTGTGCCCCACTGCGTTCATGTCAGCCAAGGACCGGTGGACGCACGTGTCGCAAAACCATAAAGGCGACGCGAGAATTACGTGTATCTTTTGTCGCAAGGGCTTCAGCACCATTAGCAACCTGACTTTCCACAAGAGGAACAAGCACCGCGAGGAGATGGAAGAATGGGACCGAAAGATGAAACCGTTGCCAAAACTGCAGAAAATAAATGAGGTGCCCCGAGCACAGGCTAGTCCACTACAGAACAAAACTTATGAAACTGTACGGAATTTCCTGAACAACAAGACTGAATCATTACTGCAAGACGCCCGACAAGGGGACCTCGCGAATTTTAATGTGAAAATCGGCAACACCGACATCAAATTTGGCGGCGTAACACCGCGCGGTGCCACCAACCCCATGGTGGGCAACAACAGTGGCAGCACCGAGAACAAGTCCATGATCGACCGCCTCAAGAATCTGGGCGTCGAAGTGTCTACCGGTAACATTAGGAACAATGAGCTGAAAGATGTCGACAAATTCCAGAATCCGGAGGATTTACTCCAGCTGGATATAGCGCTGGAAGCGGGCGATAATCTGGAGAGCATGATCGAATCGGAGACGATATTTGGATGTGAAGTTTGTATGCGAGATTTCAAGGACAGATCCTCGTTGTGGCTTCATATGCTATATTCGCATAAGAACGAGGCGGGTTATACGTGCGGCATGTGCTTGAAGCTGTGTGGGGGCTATCAGCTACTTCACGAGCACGTGACTCAGTGTACCGAGCTGAATGACCAGGAAAAGAGACGATACTTCTGTAATATCTGCTTTAGACAGCACGAGTCTAAGAAGAAGTTAGAGACGCATACGTTGATTCATAACTTGGCTGATCCTTGGATTCAGGAGAATTTTGATATGACTAATTTGATTTCGTCGAACCCGACGGCGACTGAGAAGATAAAGatGGAAGAAGCCGAGGCTGGTGATGGAAGCGAATTCAGCGACGCCTACAGTCAAGAGATGGACGTAACCAATGACTCGACACAGCACAGCACGCTCAACCAGCAGGACGCGATCGCTTACCAGAGCTTCCTCGAGAACACGGGCCACTTCCTCGAGTCCTCCTTCTTCGATAATGTCAAGGTGGAACCGGAAGTCAAGTTGGAAGCGGGTGACGAAGCCAGCAAGTTCCGCTGCGAGGACTGTTTCCGCGTCTACGACACGGCGATGCAACTTCAAAAACACAAGTATAATGTTCACAAGAACCCAAACCGGCTATTATCCCGTAACGACTCGTTTGGAAACCCTGTATTCGAATGCGAGTACTGTGGCGAAACATACGAGGAGCCTAGACAACTTATGAAGCACCGTTACAATGTCCATCGAACGCCGCACCAGGGAGCCCCTGGTGGGCCTCCTGGAGCAACCCCATCTTCTGCCACGTCTACCCCGGAAGAGCCCAAGGGCACCTTCCCATGCAGTGACTGCTCCCGTATTTTCGACTCAGCGCGTCAACTACAAAAGCACAGATACAACGTGCATAAGACGATAAGAAAAGTACCGGTCAATATTTTGGGCGGAGAAAGTCCGGGCAGTGGGGAAACGTTGAAACCGACGTTTCACTACTCGTACACGTTTGACTGCGAACTGTGTGGCGAGAGGGCGGCCAGTAAGACGGAGCGGTGGAAACATTGCTTCAAGAAACACAGGGACGACATGCGGCTTTGCTGCGAATTCCCGGACTGCAAGAAGGTGATGCCGACGCAAAACTTCAAGAAGGAGCACGAGACGTACCATGAGCAGCAGGGCAAGTTTCCAATTTGCTGCGAGATCTGCTCCAAGCTGTGGACTTCTAAGGTGGAGTTCTGGAAGCACGTGTCTGGCGTTCATTATTCGCTCATTGGACTCACTTGTGGAGTCTGTATGAAGATGTTTACGGAGTTAGATGAGCTCAAGGAGCACGTCAAGTCTCACGAGCCTCTATCAGATGGCGACTTCAACTGCGACATTTGTGGGCGGGGCTATTCCTCCAAGCCTAAAATGACGCGTCATCGCCTCATACATGAAAATGACCCCGACAATGATGACTTCAACATTCTAAAGAACACTCTTCTTAAGGGTGGCCAGGTCCCTGGTGGCGATGCTGCCGCCgccgctgctgctgctgctggcaAAGGAGGGAAATATGAAATACTCAACATCCCTAAGGTGAATCGCAGTTTTGATAACGACATGGAGATTATCGAGGTGAACCCAGACGATAACGGTTTGGACGGGGACCACGAGGAAATGTCGGTGGACCAGCTCTGGTGTGATGTATGTCCAGACTTGACGTTTTCGGATCTGGACGAGCTGCGCGCGCATCGCAGGAACATCCACGCCCTTTTCCCGTGCGACCTTTGCCCCAAGTTCTACGGAGGGGTAAGCCACCTATGGAAGCACACCAATCGAAGTCACAAAAACCATCCAGATATCACGTGCACGCACTGCGGCAAAACTAGTGCCAGTCGTATTCAACTACGCGGTCATATCAACAAGAACCACAAGGAGATCCTCCTTGGGCATATCGTCCACGACGGCACGGACCCAGACCCGACGAACTTGGCCTGTCAGCGGTGCGGCAAGGAGTTTAAGGTGCGCGCCATGGTGCGACGTCACGAGCGTGCCTGTCTGCTCAAAGACTCGTTCGACCCGGACCCGACCAATCTCAACTGCCAAAAGTGCGGCAAATACTACCCGATCCGCTCGCAGGTACGCCGCCACGAGCGGATATGCCTGAACCCGAAGGAGCCGCTCAGTCTGTCGTGTAAGGTGTGCGGCAAGGAGTTCCCGAAGAGATCGTACTGTCGTCGTCACGAGCGGACGTGCGGCACAAAGACGGTGCGCCCGCCCAAGGACGACACCCCCGTCTCGCTGCAGTGTGAGTGGTGCCCGAAGGTGTTCAACAATAGACGCGCCCATGTCAATCATGTGGACTACATGCATAGCCTTGTCGAGTGCGAAGTGTGCACGGAAGAGCGTGTTACCTTCCGATCAAAAACCGACCTGTACAATCACTGTAAGGAGAAACACCCAACTGACCCGAACCTACTGTGTACGTTCGAGAAGTGCCAGCGGCTGTTGCGTTGCAAGGCTGACCTGGAGAAACACCAACGTGAGCACAAAAACCGCGACAACCCGCCCACCTGTGAGTTCTGTGCCGATGTCTTCAAGGGCAGGAAGAAGCTTCGGATCCATATTCTGCATCAGCATAGGACTGAGGAAAATCGCAAGTTTATTTGCGGTATTTGCGTCAGGGTCTTTGAAGATACACCGTCTCTAATTGCGCATATCCACGGGGAGCACAGTAAACTTGCGGAACGTGACTACACGTGCCGGATTTGCGCGCGGCCCTATAACTGCAACGCCAAAGTACTAGATCATATGAAGAACACGCATGACACTGCGTATAAGCCGTGCAAGGTTTGCCTCAAAGTGTTCCTCGACGAGAAGGAGCTAGAAGAGCATGTCAATGAACATACTGTGAAGGATGCCAATCAATGTTATCTGTGCCAAGAAACATTCTTGTCCACCATGCTATTGCACGAACATGTGAAAGAGAGCCATCCGAACTTGCGGGAGAACTCGTGTGGAATTTGCGGTCGTAAATACCACAGTCTGTACACGTGTGTCGACCACGTGGAAAACAAACATGGCAGCGGGTTCTACTGCTGCCGGAAATGCCTTGCTGTGTTCACGGACCCCGACGAGAAGAACAAGCACATGGAGACCCATGGGCTGAAGGAGGAGGTTTCACAACTCACCTGTACGCGGTGCAACACCGTCCAAGACTCGGAGGATGGCATGGAGAAACATATCCAAGAGGCTCACGCGGAGCTCTTCGAAGAAATCGCGGATCGTAACATGTGTTTAATCTGCTCCAAAGTGTTGAAGTATAAGTACAGCATATTCGTGCACATAGAAAAGCATCATAAAGGCGTGTTTGCGTGCCGCACCTGTCTGATGATCTACAAGGAAAAGACCGAACTGGACGCCCATTATGTCAAACTCCATACAAGAGATAAGGACGGGAACCCGCCCCTGTTCTCGCCTGGGGCGCTAAACTCGAAGGCACCCCCGCCGAAGAAGTTGAAGAATCAGTGTTATGTGTGCCAGGTTATGTTTAACACAACTGAGCTGCTGCGGCTGCATGTAGCTTCGGACCATCCTGAGGTTCTTGAAAAGGACTCAATGTGTACAATTTGCGGGCACGGGTACTCGAGTCGTTTCAAGGTTTACTACCACGTTGTGGCTGTACACGGTGATCCGTACAAGTGCTGTAGGAAATGCGGAAAGATTCTAATGAATGCTGCCGAGCTTGAAGAACACGATGTGCAACATGCCAACGACCCTGTCAAGAAACCGACACCTAAGCGGAAAACCAAGCCGGAAGAAGTGGTAGTTAATCATGAGAGGAGAACGAGGCCGCAAAGAAACCGTTCCAAAGTCCTAAACAACTACGTCGTGGAcatggaggaggaggaggaggaagaagaagaagccggAGACGAGGAGGGGGAGAGTGAAAATTTATCTCCCGGTGGTGATGAAACCGGTAATGATGTAGAAGAACCCTCGGAGGAGCCCGACGATACGGATGATGATGGCTCGGATGATGAAGAGggagAAAAAGATGAAGACGATGACAGCGACGTTGGggaggaagaggaagatgaaGATGAGGAAAGTGAGGACGGAGAGGATGGGGAGGATGGAGAGGAAGACAGCGAGGAGGAAGGCGAGAGTTATCAAGGCAAAATTGCCGCCAAAGTAGCCGATGGCAATGACGAGGACGAGAATTACACGTGTGAAGCAGGCAATGAAAATTTGAAGTTGAAGATTAAACATAATATAAATAGttttaaaaaGGAAGATGACTCGGAAGAAGTGGAAGGAGCCGAAAGTCCTACGAGAAAGCGGAAACGATCCGATGTTGTGAATGGGACTGAAGGCGAACCTGTGGGGAAGAGACTCCTACCCTGCGCGACTGAATGA
Protein Sequence: MFNLESFYDFYETSLRAQSRLHAQIIEGGGKAEPVVPKTVAPGHVTPEDLSRPRPPPPPPPPPPPHPPPLPHSHPAMQQIHQQHPLHPPPAQPASVERPFPCDLCPTAFMSAKDRWTHVSQNHKGDARITCIFCRKGFSTISNLTFHKRNKHREEMEEWDRKMKPLPKLQKINEVPRAQASPLQNKTYETVRNFLNNKTESLLQDARQGDLANFNVKIGNTDIKFGGVTPRGATNPMVGNNSGSTENKSMIDRLKNLGVEVSTGNIRNNELKDVDKFQNPEDLLQLDIALEAGDNLESMIESETIFGCEVCMRDFKDRSSLWLHMLYSHKNEAGYTCGMCLKLCGGYQLLHEHVTQCTELNDQEKRRYFCNICFRQHESKKKLETHTLIHNLADPWIQENFDMTNLISSNPTATEKIKMEEAEAGDGSEFSDAYSQEMDVTNDSTQHSTLNQQDAIAYQSFLENTGHFLESSFFDNVKVEPEVKLEAGDEASKFRCEDCFRVYDTAMQLQKHKYNVHKNPNRLLSRNDSFGNPVFECEYCGETYEEPRQLMKHRYNVHRTPHQGAPGGPPGATPSSATSTPEEPKGTFPCSDCSRIFDSARQLQKHRYNVHKTIRKVPVNILGGESPGSGETLKPTFHYSYTFDCELCGERAASKTERWKHCFKKHRDDMRLCCEFPDCKKVMPTQNFKKEHETYHEQQGKFPICCEICSKLWTSKVEFWKHVSGVHYSLIGLTCGVCMKMFTELDELKEHVKSHEPLSDGDFNCDICGRGYSSKPKMTRHRLIHENDPDNDDFNILKNTLLKGGQVPGGDAAAAAAAAAGKGGKYEILNIPKVNRSFDNDMEIIEVNPDDNGLDGDHEEMSVDQLWCDVCPDLTFSDLDELRAHRRNIHALFPCDLCPKFYGGVSHLWKHTNRSHKNHPDITCTHCGKTSASRIQLRGHINKNHKEILLGHIVHDGTDPDPTNLACQRCGKEFKVRAMVRRHERACLLKDSFDPDPTNLNCQKCGKYYPIRSQVRRHERICLNPKEPLSLSCKVCGKEFPKRSYCRRHERTCGTKTVRPPKDDTPVSLQCEWCPKVFNNRRAHVNHVDYMHSLVECEVCTEERVTFRSKTDLYNHCKEKHPTDPNLLCTFEKCQRLLRCKADLEKHQREHKNRDNPPTCEFCADVFKGRKKLRIHILHQHRTEENRKFICGICVRVFEDTPSLIAHIHGEHSKLAERDYTCRICARPYNCNAKVLDHMKNTHDTAYKPCKVCLKVFLDEKELEEHVNEHTVKDANQCYLCQETFLSTMLLHEHVKESHPNLRENSCGICGRKYHSLYTCVDHVENKHGSGFYCCRKCLAVFTDPDEKNKHMETHGLKEEVSQLTCTRCNTVQDSEDGMEKHIQEAHAELFEEIADRNMCLICSKVLKYKYSIFVHIEKHHKGVFACRTCLMIYKEKTELDAHYVKLHTRDKDGNPPLFSPGALNSKAPPPKKLKNQCYVCQVMFNTTELLRLHVASDHPEVLEKDSMCTICGHGYSSRFKVYYHVVAVHGDPYKCCRKCGKILMNAAELEEHDVQHANDPVKKPTPKRKTKPEEVVVNHERRTRPQRNRSKVLNNYVVDMEEEEEEEEEAGDEEGESENLSPGGDETGNDVEEPSEEPDDTDDDGSDDEEGEKDEDDDSDVGEEEEDEDEESEDGEDGEDGEEDSEEEGESYQGKIAAKVADGNDEDENYTCEAGNENLKLKIKHNINSFKKEDDSEEVEGAESPTRKRKRSDVVNGTEGEPVGKRLLPCATE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -