Basic Information

Insect: Psococerastis gibbosa
Gene Symbol: CFDP2
Assembly: GCA_963971405.1
Location: OZ020488.1:45395077-45407300[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0073 0.48 11.5 1.1 1 23 157 180 157 180 0.90

2 12 0.021 1.4 10.0 1.1 1 21 191 211 191 215 0.87

3 12 0.57 38 5.5 0.5 2 14 220 232 219 240 0.79

4 12 0.033 2.2 9.4 0.2 2 21 247 266 246 267 0.92

5 12 7.1e-05 0.0047 17.8 6.2 1 23 275 297 275 297 0.99

6 12 0.00042 0.028 15.4 2.1 1 23 303 325 303 325 0.96

7 12 1.9e-05 0.0012 19.6 2.9 1 23 331 353 331 353 0.96

8 12 2.5 1.6e+02 3.5 0.1 2 22 645 662 644 664 0.69

9 12 0.00025 0.016 16.1 1.1 1 21 669 691 669 692 0.93

10 12 0.00047 0.031 15.2 5.0 1 23 700 722 700 722 0.99

11 12 0.00039 0.026 15.5 1.0 2 23 728 750 728 750 0.94

12 12 0.14 9.6 7.4 0.1 2 13 758 769 757 770 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0073	0.48	11.5	1.1	1	23	157	180	157	180	0.90
2	12	0.021	1.4	10.0	1.1	1	21	191	211	191	215	0.87
3	12	0.57	38	5.5	0.5	2	14	220	232	219	240	0.79
4	12	0.033	2.2	9.4	0.2	2	21	247	266	246	267	0.92
5	12	7.1e-05	0.0047	17.8	6.2	1	23	275	297	275	297	0.99
6	12	0.00042	0.028	15.4	2.1	1	23	303	325	303	325	0.96
7	12	1.9e-05	0.0012	19.6	2.9	1	23	331	353	331	353	0.96
8	12	2.5	1.6e+02	3.5	0.1	2	22	645	662	644	664	0.69
9	12	0.00025	0.016	16.1	1.1	1	21	669	691	669	692	0.93
10	12	0.00047	0.031	15.2	5.0	1	23	700	722	700	722	0.99
11	12	0.00039	0.026	15.5	1.0	2	23	728	750	728	750	0.94
12	12	0.14	9.6	7.4	0.1	2	13	758	769	757	770	0.88

Sequence Information

Coding Sequence: ATGGACAATATAGCAATAGATGTTGTTAATTTTGATCATATCTGTCGGCTTTGCATGAATGCTAAACGTAGTTTAGTGGATGTCTTTGCCACAGTCGCTGAAGGCGCCTTGGATATCCCAACTAAGCTAAAGGACTGCGCTGATGTTGAGGCGTACGAAGATGATGGGTTGCcgaaaaaaatttgtttgaagTGCATTGGCTGTTTAAATGCAGCTTACGATTTTAAGAAGCAATGCCAGTCTGCTGATTCCGTTCTTAAAGGAGTGCTTAAAGCAGCTAATAGTAGCAGTGAACATTTTGATtcTTGGTCTGATGAAGAAAATGCTGCCACTAAAGCCCCTGTAGTCCGAACAAAACCCGAATTCAACTATTTCGAAAGCGACGACGACAATACCCCCCTCTACTCATTGTTTCAAACTAGTCTTCGCGAGAAACGTGTGTGGATGAAACGGAAGCCGCGCAAGACGTACACCTGCGAGACATGTCAGAAGATATTCAATACCATCAACACGCTAGCAAAACACAACGTCAAGTACCACGGTGCAGCCGCGGAAGAAGGCGAATTGGTGCATAAATGCGAGCAATGTGACCAACGGTTTCGAACGTGGAACGAACGCTTAGACCATGAGAAACAAATCGGACACGCCGGCAGAGTAGAgtgtaaattttgtaaaaagaaATTTGTCAGATCGTATGTTGCGATACATGAAAGTCTACACTCAGGCGAACGGAACCTGAACTGTTCAATTTGCCGAAAGTCATTTTATGGGCAAGCTGCTTACGACAGGCATCTTATGCGGTGTACGAAAGCTGAGAAACAGTTTCAGTGTTCATACTGCGGGCGCCAGTTTTATAGATCTTGTCATTTGAGGGACCACGTTCGTATACATACAATGGAAAAGCCGCATGTTTGTCAGATTTGTAAGAAAGGGTTTCGGAGGCGTGCTAAGCTGAAGATGCATGAGGATATGCACAATGATGTGCGACCGTATTTGTGTACCAAGTGTGGACGTGGCTTTAGACAGTCGCAACATATGAAGGAGCATATGAGGATCCATACTGGGATAAGGCCGTATGTCTGTGATACAGTCTACTTGCCTGCAACAGAAGCTATATCGGTGCCGTCGTTGCCAAGGAAGGTCATCAATGTTAAGCGTAGCTGCAAAGACATGACGAAAAGTGGCATTTGCACGGGACTGGAAATACAATCAGCTACATATAAAACCAACGTTTTGTTACCCACCACTGCAGACCAGAGCTCTCTGAACACAGAAAcagaactatttaacaattttgaCACTGTTGGTCTATTGAAAAATGATATAGTTTTGGCTGGACCTAATCTTGCAGATTCAGCGAAAAATATTTCTACAAAACGCCCTGAGGATCATGATTTTACGGAGTCATGTTCATATGGAGTTACATTTTTCGATAGCCTCGAAGTTAGCAATCCGACTTTTGAAACTGAAAGTGATATTGGAAAAATTTCAAACGATATCGGAAATGCATTCGAAATTAACGCCGAATTGCTTGAAACCCTTGCGGGCGACAAAACTTCGGTTATAGAGCTCGATCCTATTGAGGGCCTGCATACAGATTCATTTCCAGTTGACAACGGGCTGTATGAGTGTCATGACGACAGAGCTATGATAATCGATGAAAGTGTTATCGAAAAATTAGGCATTCTGGAAAATGATGAATTGTTCAGAAAAGGGGCCTTATTTTCAGACAATCTTGATGCCAAAGTTTCTGTTTTAGAATTGGATGATGATAATGGAGAATATCCTGAAGATCTCAACGAAGCAGATACATTCAATACTGAAGTAGAATTTTTGGACTCTGCTGAAGAAATCGCGACCTCCAAAGCGGTCGAAAAAGATACGGCAAAGCTACCAGATGGTCCAGGCAGCTATAGAATGGATGGAAAAGTACCTTGCCCTATCTGCGGTATAGTTCTCAAGCGACTGCGGGAGCATATGCGACTGTTCCACCGAAATAAAAGCTTTACGTGTACCAATCACGATTGTGGGAAAGAATTTAAAACTTTGAGAAATCTTCAGTCACACGAATTGACCTGTTTCGATTTGGAGAAAGAATACAAGTGTAAATATTGTTTGAAAGAGTTTCATAGGAAGAGTAATTGGACTGCGCATGAAAAGAGGCATTTTCTGGCTGAGGCAAGATGTGTGTTGTGTGGCAAGACGTTTTCTGATACTGCAGGGTTAAAGAAACATTTTTTAAGGCGACATGACTCTCTGAAGCCGCGTTTAGAGTGTCCTCATTGCGGGAAATTGTTTAAATCAAATGAAGTCAAAATTGAGTCAAAACCCGTAGACACTGTACTCATACAGGTATACATGCCTACCAGTCAACATGGTGAGGAAGAAGTAGACCAGTTATATGAAACCCTGCGCAAACTGATTAGAGACAATAAAGCACATGACAATCTCATCGTCATGGGAGATTGGAACGCTGTTGTCGGAGAAGGCAGGGAAGGAAGATACATTGGACAATTTGGTCTCGGCATTAGAAATGAACGAGGGGACAAACTGGCCGAATTCTGTGCGCAGCATGACCTAGTTGTAGCAAACACACTATTCCAACATCACCCCAGGCGAAGATATACATGGATATCACCAGGGGACAGAACCCGAACACAAATAGATTATATCCTAATAAGATTAAGATACCAAAACCAAATGAGAGACTGTAGAAGCTACTCTAGCCCTGACATAGACAGTGACCACAATATGGTGATAGCAAAGAgtatactaaaactaaaaaagctAACCAAAAGAAAAGGTAAGAGATGGAATTTAGCAAAGCTGAATGACCCTACAACGGCAGCCCAATACCAAAGGGAAACTGATGAAATTGTCACGAGAAATAACCTAGCCCCTAATAGCATCAATGAGGAGTGGAACTTACTTAAAAATAGCGTTGCACAAGCGGCTGAAAGAATAATTGGAAAAGCAGTACCAGAAGCTAAAAATGACTGGATGACCGAAGAAATAATGCAGTTAATAAAGCAAAGACGCGATGCAAAAAATGATAACAGCGAAGAAGGGCAAAGAACTTATAGATCTCTTCGCAACAGGATAAACAGAGAGTCAAGAATAGCCAAAGAAAACCACTACCAAAGACAATGTATGGAAAGTGGAAACACAGAGCAAGGCTATGCAAAGGTGAAGGGACTCTTTGGAAAACGGGATGGAAAAAGCGAAGCAATTGAAGCAGAGGATGGGAAGATGCTGTTTGATGATGAACAAGTCAGTGGCAGATGGAAAGAGTATCTAGAAACACTCTACAGCGGGAATATTGATGAGGTCACACTTGAAAACATTAACGAATTAGCAGACAGAGACGGTGAACTTGGAGACGAAATTCTCCGCTCTGAATTCAACTATGCGATTGACAAACTCAAGACCAGAAAATCGCCGGGCACTGATGAAATACCTGCAGAACTACTCAAACATTGCGGAGAAGAGAGTAAAGATGCTATGTTCAGAATGATAACAACAGCCTACGAGACAGGGGAAATACCAGATGATTTTAAGAAGTGTCTCATCGTAACTTTACCCAAAAAACAAGGGGccacaaaatgtgaaaactacaGAACTTTAAGTCTGGTATCTCATGCATCTAAAAATTTAATGAACATAGTCCTGAAAAGAATAGAGCCTACCATAGACAGAATTATAACTGACGACCAGTATGGTTTCAGACGAGGCAGAGGCACTAGAGAAGCCATACTAGCGCTACGCTTGACACTTGAAAaacgaataaagaaaaataaaaccacataCTTAGCCTTCATAGGCCTGGAAAAGGCGTTCGATAAAgtgtcatggaaaaaattgtttgaaatactCAAAAAGGCAGGACTGAAATACAAAGATAGACGAATTATTATGGCATTGTATAAAGAAGAGACGGCTGTCATCAGGTGCGGTAACGCTGAAgaacaagcaaaaattaaatcaggAGTTCGACAAGGATGCTCACTCTCTCCAGTCCTGTTCAACCTGTATATTCAGTTTGCTCTAAATGAAATGAGGGAAGCCCTCAGAAACACAAGAGGTGCAAAGAAATAG
Protein Sequence: MDNIAIDVVNFDHICRLCMNAKRSLVDVFATVAEGALDIPTKLKDCADVEAYEDDGLPKKICLKCIGCLNAAYDFKKQCQSADSVLKGVLKAANSSSEHFDSWSDEENAATKAPVVRTKPEFNYFESDDDNTPLYSLFQTSLREKRVWMKRKPRKTYTCETCQKIFNTINTLAKHNVKYHGAAAEEGELVHKCEQCDQRFRTWNERLDHEKQIGHAGRVECKFCKKKFVRSYVAIHESLHSGERNLNCSICRKSFYGQAAYDRHLMRCTKAEKQFQCSYCGRQFYRSCHLRDHVRIHTMEKPHVCQICKKGFRRRAKLKMHEDMHNDVRPYLCTKCGRGFRQSQHMKEHMRIHTGIRPYVCDTVYLPATEAISVPSLPRKVINVKRSCKDMTKSGICTGLEIQSATYKTNVLLPTTADQSSLNTETELFNNFDTVGLLKNDIVLAGPNLADSAKNISTKRPEDHDFTESCSYGVTFFDSLEVSNPTFETESDIGKISNDIGNAFEINAELLETLAGDKTSVIELDPIEGLHTDSFPVDNGLYECHDDRAMIIDESVIEKLGILENDELFRKGALFSDNLDAKVSVLELDDDNGEYPEDLNEADTFNTEVEFLDSAEEIATSKAVEKDTAKLPDGPGSYRMDGKVPCPICGIVLKRLREHMRLFHRNKSFTCTNHDCGKEFKTLRNLQSHELTCFDLEKEYKCKYCLKEFHRKSNWTAHEKRHFLAEARCVLCGKTFSDTAGLKKHFLRRHDSLKPRLECPHCGKLFKSNEVKIESKPVDTVLIQVYMPTSQHGEEEVDQLYETLRKLIRDNKAHDNLIVMGDWNAVVGEGREGRYIGQFGLGIRNERGDKLAEFCAQHDLVVANTLFQHHPRRRYTWISPGDRTRTQIDYILIRLRYQNQMRDCRSYSSPDIDSDHNMVIAKSILKLKKLTKRKGKRWNLAKLNDPTTAAQYQRETDEIVTRNNLAPNSINEEWNLLKNSVAQAAERIIGKAVPEAKNDWMTEEIMQLIKQRRDAKNDNSEEGQRTYRSLRNRINRESRIAKENHYQRQCMESGNTEQGYAKVKGLFGKRDGKSEAIEAEDGKMLFDDEQVSGRWKEYLETLYSGNIDEVTLENINELADRDGELGDEILRSEFNYAIDKLKTRKSPGTDEIPAELLKHCGEESKDAMFRMITTAYETGEIPDDFKKCLIVTLPKKQGATKCENYRTLSLVSHASKNLMNIVLKRIEPTIDRIITDDQYGFRRGRGTREAILALRLTLEKRIKKNKTTYLAFIGLEKAFDKVSWKKLFEILKKAGLKYKDRRIIMALYKEETAVIRCGNAEEQAKIKSGVRQGCSLSPVLFNLYIQFALNEMREALRNTRGAKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -