Basic Information

Insect: Psococerastis gibbosa
Gene Symbol: ZNF236
Assembly: GCA_963971405.1
Location: OZ020491.1:9662174-9670022[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.015 0.98 10.5 0.0 1 23 141 164 141 164 0.91

2 23 0.032 2.1 9.5 0.0 1 23 170 193 170 193 0.89

3 23 5.3e-05 0.0035 18.2 0.1 2 23 199 220 198 220 0.96

4 23 0.0029 0.19 12.8 0.0 3 23 228 249 227 249 0.97

5 23 0.012 0.81 10.8 1.2 1 23 268 290 268 290 0.94

6 23 9e-07 5.9e-05 23.8 0.4 1 23 315 337 315 337 0.98

7 23 0.00023 0.015 16.2 0.2 1 23 343 366 343 367 0.96

8 23 5.1e-05 0.0033 18.3 0.8 1 23 372 395 372 395 0.96

9 23 8.4e-05 0.0055 17.6 1.8 1 23 515 537 515 537 0.97

10 23 2.3e-06 0.00015 22.5 4.6 1 23 543 565 543 565 0.99

11 23 0.00079 0.052 14.5 1.7 1 23 575 599 575 599 0.93

12 23 0.023 1.6 9.9 3.4 1 23 647 669 647 669 0.96

13 23 0.00011 0.0072 17.2 2.3 1 23 675 697 675 697 0.98

14 23 5e-06 0.00033 21.4 0.6 1 23 703 726 703 726 0.98

15 23 0.0055 0.36 11.9 5.0 1 23 732 754 732 754 0.96

16 23 0.0085 0.56 11.3 0.4 1 23 961 983 961 983 0.98

17 23 0.014 0.94 10.6 3.4 1 23 1060 1082 1060 1082 0.98

18 23 2.5e-05 0.0017 19.2 2.1 1 23 1088 1110 1088 1110 0.99

19 23 0.00013 0.0086 17.0 2.1 2 23 1117 1138 1116 1138 0.96

20 23 0.00056 0.037 15.0 0.7 1 20 1144 1163 1144 1166 0.92

21 23 5.4e-05 0.0036 18.2 0.4 3 23 1289 1309 1287 1309 0.96

22 23 1.5e-05 0.001 19.9 0.2 1 23 1315 1337 1315 1337 0.98

23 23 2e-05 0.0013 19.5 3.4 1 23 1343 1366 1343 1366 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.015	0.98	10.5	0.0	1	23	141	164	141	164	0.91
2	23	0.032	2.1	9.5	0.0	1	23	170	193	170	193	0.89
3	23	5.3e-05	0.0035	18.2	0.1	2	23	199	220	198	220	0.96
4	23	0.0029	0.19	12.8	0.0	3	23	228	249	227	249	0.97
5	23	0.012	0.81	10.8	1.2	1	23	268	290	268	290	0.94
6	23	9e-07	5.9e-05	23.8	0.4	1	23	315	337	315	337	0.98
7	23	0.00023	0.015	16.2	0.2	1	23	343	366	343	367	0.96
8	23	5.1e-05	0.0033	18.3	0.8	1	23	372	395	372	395	0.96
9	23	8.4e-05	0.0055	17.6	1.8	1	23	515	537	515	537	0.97
10	23	2.3e-06	0.00015	22.5	4.6	1	23	543	565	543	565	0.99
11	23	0.00079	0.052	14.5	1.7	1	23	575	599	575	599	0.93
12	23	0.023	1.6	9.9	3.4	1	23	647	669	647	669	0.96
13	23	0.00011	0.0072	17.2	2.3	1	23	675	697	675	697	0.98
14	23	5e-06	0.00033	21.4	0.6	1	23	703	726	703	726	0.98
15	23	0.0055	0.36	11.9	5.0	1	23	732	754	732	754	0.96
16	23	0.0085	0.56	11.3	0.4	1	23	961	983	961	983	0.98
17	23	0.014	0.94	10.6	3.4	1	23	1060	1082	1060	1082	0.98
18	23	2.5e-05	0.0017	19.2	2.1	1	23	1088	1110	1088	1110	0.99
19	23	0.00013	0.0086	17.0	2.1	2	23	1117	1138	1116	1138	0.96
20	23	0.00056	0.037	15.0	0.7	1	20	1144	1163	1144	1166	0.92
21	23	5.4e-05	0.0036	18.2	0.4	3	23	1289	1309	1287	1309	0.96
22	23	1.5e-05	0.001	19.9	0.2	1	23	1315	1337	1315	1337	0.98
23	23	2e-05	0.0013	19.5	3.4	1	23	1343	1366	1343	1366	0.97

Sequence Information

Coding Sequence: ATGGACGTCGACATCAAAAGTGGACTACCCTGCCTAGAAAATTTGGCCAGCAGTGAAGTTTGTGTACAGGAGAACACCGTATTTGAATTGACGCGCCTGGATGGAACAACTATTCAAATTCCTGGCTTCCTATCCCCACAACAAGGTAGCGTGTCCATCTTGATCCCAGCAGGGCTTATTAACACGAATGACATCAAGGAATGTGATCCATTGATCTTGAATATTCCTCTTGAACCTGATTCACCTCTGGTACTAAATGCCACGCAGAATATATTAACAGACAGTATTTTATCAGCTTATTTGCCTACTGATAACAATAAATGTCAAGAACAAGGTCTTGCTAACGCTCATGAAATCCCAAAGAAACCTCCTCAAAAAAGGGGCCGTAAAAGAAAAAAAGCTGTTTTGAAAGATGGCACTTTTGCATGTACCGTTTGTGAAGAAACTTTTAAGGATTTAGGTGCAGTACAAGAGCACCAAGATGCAGCTCACGTTGACAAGAAAGAGTTCGCTTGTGAAACCTGCGGTGTGAGCTATAATCTTCAAGGGAATCTATTAGTGCATGAAGCTTTACAGCATCATAAAGCAAAATTGGAATGTCCAATTTGTCAAAGAGTTTTCACAAGAGTTGCATCATTTAAAGCCCATTTATTAATACATTTTGAGGACGATTCGTTGTTGTGTTCAGAATGTGAAGAAGAGTTCCCTTCTCCAGCTCAGCTTGAAGAACATAGAAATAAAATACACTTGAGAATAACAGAAGGCACATCGCAAGCTGTCCCCATTAATAAAAATGGGTTATACCTTTGTAAAATTTGCTGTAAAATGTTCACAAATCCGGCATCTCTTGCGTCCCATAAATTGTGGCATGACaaaatggaaatggaaaataaGGTTAAGTATCAGAGACGGAGAAAGCGGCCGACAAGTCGCCGGTACCGCTACTCATGTGATCGCTGCGATAAAACTTTCCCAAAACCAAGTCAACTGGAGAGACATGCCAGGGTACACACAGGCGAAAGGCCGTTCGCTTGCGATTTATGTCCTGCTGCTTTTAATCAGAAAGGTTCCCTTCAAATCCACATCGAGACGAAGCATCATGGAATTAGAAGGTTCAGCTGCACCTACTGCGGTGCATGCTTCGGGCAACGTGGTAACCTTATGTCCCATCTGGCCAAAGCCCATGAAACCTCTTCGTTGGACGAGCAACGTTACTTCTGTTCCGAATGCTCCTGCTCGTTTCGTAAGTCAGCCTCTTTGCACTGTCATTTTACGCGGTTTCATGGCGTCAAGAAACTTCCAAGTTTGGGCACTGTTGGGATCAACCCTCAGTTGGATATCTTACAGAAAGCCCTGCGTGAGAGCGGGCTTCCCGCGGAAGAAGGTTGTAGGATTGTCGATGATATTGATATTGGAGCTATGACGGAGCTAGCTGGTAATTCACCGCCAACATTCTCAGAAGTGACGATATCTGATATGAAAGCTGATGGTCAGGttaaaatatacaatgtaaCACTGCGTATGGATGGCACAACACGATGGCACATCTGCAACGTTTGTTTGAAAGAATTCAAGAAGCCATCCGATTTAATTCGGCATTTCCGTATGCACACAAAAGAAAAACCATTTACCTGCCATGAATGCAATCGGTCGTTTTCAATGAAATCTACGCTAACTTCCCACATCAAGACGCATTCGAAGCGATTCGGATCTGACAACCATCACTCATGTAATATTTGTTCTCGGAATTTCATGACCTTAGGGCAGTTGCGTATCCACCAGAAAACTAATGTGCACAGAGCTAGGCTACGTGGAGAGGTAGAACCTCCGCTACCGGAACCTTTCGTTGAAACTGCCGATGGAGTTTATCAACCTAGGATGACTAAGGCGGAGATGATTTTTAACAACAGTCAGTGTGCTAGTCTCGAAGAGCGTCCCCACAGATGTGATGTTTGTGCACTACGTTTCCGGAAAGTTAGTCACTTAAAACAACATGCAATGCAACATACTGGAGACCGGCCGTTCGAGTGTAATGTTTGCCATAAGAAATTTTCGAAAAACGCTGTATTAACTGTTCATAAGAGGATACATTTAGGATTAAAAGAATTCACATGTGACATATGTGATGCCCAGTTTTCAACGCGAGGAAGTTTACTGAGGCACATAAAAACGTTTCATTGCGAAGAACGTCCGTTTCTTTGCCCATTTTGCTATAAGCGGTTCAAAACGTCAGTTAACTGCAAGAAACATATGATAACACATCGTTGGTCGGAAAAAGAAGAATTTCATACGATTCCGGCCACAAATGGGCCTGCTGTTCAAGTAATAACTGAAAATAACGACTTAAATACGAACTCACTTCTATCAGATGTAGCATCTCTAAATTTACCATCTGTAACGCATGAAACGTTGCAAGAGCTTGGAGCTGGTTTTGATGCCCATCTATTCGCCACTGCACCCGAACCAGATTACTCAGAAGAAGTGGCGATTCCTGTTGACAATTTAATCATCCCAGATCTGTTAGATGTCAGTGCGGAAGAGGGTAGAGAGGATGAACAGCTCACAGAAGTAGGGTCCATGTTTGAAATTTTTACCGATGCTACTGGAGCAATGCATATTCAAGCAATTAATATGGGAAATTTAGATTCTCAAAAAATTATGACTGAACCAATTATGGAAGATTCACTGGACGTAACACCTCATCCTCTGCCACCAGATGAATTAATCTCGGACCCTGTCAGTGCTATCAGTATTGGACCGATTGATATACCAAACTTGCAAACCTCAAAAGTCATGACTGAGCCAATCACTGTACAGGTACCGCCTCTTTCACCTCCTCCTCTTCCCCCTCCAGCACCGCCACCTACGCTAGTAGAGGAATTCATATGTGAGACATGTAACTGGGTGACGTATTCAGACAAAACATTAGCGAAACACGTGAAAACTCACCAGTTAACTGACGCAAACGCAGATGTTAGCAGGGTTGTTCCTAGTCCTGCAATCCGGCTTAAACCTCGCCGGCGAGGTCAATTTAAAGAATTTACCGAGGCCGAGACGGTTGAACTGGCTGCACAAAAAGTAGCGCCGGGTGCTAGTCTTTCTGAACAACTTCTAGTAGCAGCTGCATTAGAGAAACTGCGCAAGGGGCCACAGAAagcaaagaagaagaatatgcgGTTTTCGTGCGCAAGCTGTGAGAAGGGGTTCTCCAAGCATTGCGATCTGGTGCGCCACGAAAGGATTCACACGGGTGAGCGGCCGTTCCAATGTCCGCGATGTTTCCGGACCTTCACTGTGAAATCCACGTTGGTGTCCCATCTGAAGACGCATGCGTCCCGCGTCCTGCTCAACTGCCATGTCTGTGATTCACTGTTTTCGACAAGAAGCTCTCTGAAGCTTCACATGAGGATACATACCGCGGTCAGACCCTTCGCGTGCACCTTATGTCCAGCACGGTTTCGAACATCTGGCCACCTGAAAAACCACATCCCGTCGCACACGAAGCTGAAATTGCTGCGTCCTTGGAGCACTGACGCCATTAATAAGATCGCAGATATGATCGCGTCCTCTGGGTTTTCTGTCAAAGTTCCTACTAAGGAGGAGGAAGCTTTCGACGCTATGGAAgtatttCAAGGAAAAGAAAACGTGGAAGCCATGGAGGATCCCATGATGCCCGACGATAGTATCGTCCAACTTCTTAACCCAAAccaGGAGGATGGTTTCTTGGAACTTCGTACAGAAGACGGCCAACTGGTGCAGGTGTTTACAACTATTCCGTCTCTGCCAACGGAGGTGGATCCAATCTCCGGAACCTCGTCCGTTGTCGCGGACCAGCCACCGCCTTCTAAACGGATCGGGCTGGCGTGCTCCACGTGCCAGAAGGTGTTCCCCAAGCGCTCCATGTTGATCCGCCATGAACGGGTCCATACTGGCGAACGACCGTTTTCTTGTGAGGAGTGTGATATGAGCTTCAATCAGCGCTCTGTGCTGAATGCCCATATATTAATGCATAAGGgTGAAAAACCCCACTCGTGCCCATACTGCAGTTACACCTGCACTCAAAGGGGCAATCTCAACGCCCACATTCGAAGAATTCACCAATTTGTTTACGATTTAAGCGCTGGTTCCATGACTGTTAAGAAAAAGCCAAAAACATCTACTTTGCGGAAGCCAAATGCTGTACCAGTGGAATCGACTATGCCACCAGAACCTTTAGATCTCGTCGATGATAGAAATGCTGATTTCGAACAGGTGATGGGAGAATTGTTCCCGCAGGTCACGTAA
Protein Sequence: MDVDIKSGLPCLENLASSEVCVQENTVFELTRLDGTTIQIPGFLSPQQGSVSILIPAGLINTNDIKECDPLILNIPLEPDSPLVLNATQNILTDSILSAYLPTDNNKCQEQGLANAHEIPKKPPQKRGRKRKKAVLKDGTFACTVCEETFKDLGAVQEHQDAAHVDKKEFACETCGVSYNLQGNLLVHEALQHHKAKLECPICQRVFTRVASFKAHLLIHFEDDSLLCSECEEEFPSPAQLEEHRNKIHLRITEGTSQAVPINKNGLYLCKICCKMFTNPASLASHKLWHDKMEMENKVKYQRRRKRPTSRRYRYSCDRCDKTFPKPSQLERHARVHTGERPFACDLCPAAFNQKGSLQIHIETKHHGIRRFSCTYCGACFGQRGNLMSHLAKAHETSSLDEQRYFCSECSCSFRKSASLHCHFTRFHGVKKLPSLGTVGINPQLDILQKALRESGLPAEEGCRIVDDIDIGAMTELAGNSPPTFSEVTISDMKADGQVKIYNVTLRMDGTTRWHICNVCLKEFKKPSDLIRHFRMHTKEKPFTCHECNRSFSMKSTLTSHIKTHSKRFGSDNHHSCNICSRNFMTLGQLRIHQKTNVHRARLRGEVEPPLPEPFVETADGVYQPRMTKAEMIFNNSQCASLEERPHRCDVCALRFRKVSHLKQHAMQHTGDRPFECNVCHKKFSKNAVLTVHKRIHLGLKEFTCDICDAQFSTRGSLLRHIKTFHCEERPFLCPFCYKRFKTSVNCKKHMITHRWSEKEEFHTIPATNGPAVQVITENNDLNTNSLLSDVASLNLPSVTHETLQELGAGFDAHLFATAPEPDYSEEVAIPVDNLIIPDLLDVSAEEGREDEQLTEVGSMFEIFTDATGAMHIQAINMGNLDSQKIMTEPIMEDSLDVTPHPLPPDELISDPVSAISIGPIDIPNLQTSKVMTEPITVQVPPLSPPPLPPPAPPPTLVEEFICETCNWVTYSDKTLAKHVKTHQLTDANADVSRVVPSPAIRLKPRRRGQFKEFTEAETVELAAQKVAPGASLSEQLLVAAALEKLRKGPQKAKKKNMRFSCASCEKGFSKHCDLVRHERIHTGERPFQCPRCFRTFTVKSTLVSHLKTHASRVLLNCHVCDSLFSTRSSLKLHMRIHTAVRPFACTLCPARFRTSGHLKNHIPSHTKLKLLRPWSTDAINKIADMIASSGFSVKVPTKEEEAFDAMEVFQGKENVEAMEDPMMPDDSIVQLLNPNQEDGFLELRTEDGQLVQVFTTIPSLPTEVDPISGTSSVVADQPPPSKRIGLACSTCQKVFPKRSMLIRHERVHTGERPFSCEECDMSFNQRSVLNAHILMHKGEKPHSCPYCSYTCTQRGNLNAHIRRIHQFVYDLSAGSMTVKKKPKTSTLRKPNAVPVESTMPPEPLDLVDDRNADFEQVMGELFPQVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -