Pgib019845.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Psococerastis gibbosa
Gene Symbol
znf711
Assembly
GCA_963971405.1
Location
OZ020490.1:30060645-30070555[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 0.0092 0.61 11.1 0.1 1 17 50 66 50 67 0.95
2 36 2.1 1.4e+02 3.7 0.0 5 20 116 131 115 133 0.89
3 36 0.0028 0.18 12.8 0.7 1 23 138 161 138 161 0.97
4 36 0.021 1.4 10.0 4.0 1 23 169 192 169 192 0.97
5 36 0.015 1 10.5 0.8 2 23 199 220 198 220 0.97
6 36 0.00028 0.018 15.9 0.7 1 23 226 248 226 248 0.99
7 36 0.0032 0.21 12.6 0.2 1 23 254 276 254 276 0.98
8 36 5.3e-06 0.00035 21.3 2.7 1 23 282 304 282 304 0.99
9 36 1.4e-05 0.00094 20.0 0.7 1 23 310 332 310 332 0.98
10 36 0.00029 0.019 15.9 0.5 1 23 338 360 338 360 0.95
11 36 4.8e-06 0.00032 21.5 0.3 1 23 366 388 366 388 0.99
12 36 0.043 2.9 9.0 1.6 1 17 394 410 394 411 0.95
13 36 0.00082 0.054 14.5 0.7 1 23 464 486 464 486 0.94
14 36 0.00063 0.042 14.8 0.6 1 23 492 515 492 515 0.95
15 36 0.02 1.4 10.1 2.1 1 23 524 547 524 547 0.97
16 36 0.00059 0.039 14.9 0.5 2 23 554 575 553 575 0.97
17 36 0.00049 0.033 15.1 0.9 1 23 581 603 581 603 0.98
18 36 1.4 94 4.3 1.1 1 17 609 625 609 626 0.90
19 36 3.8e-05 0.0025 18.6 0.8 1 23 715 737 715 737 0.98
20 36 0.0037 0.24 12.4 3.0 1 23 743 766 743 766 0.98
21 36 0.039 2.6 9.2 0.3 3 23 776 796 775 796 0.93
22 36 0.14 9.5 7.4 0.3 3 23 813 834 811 834 0.96
23 36 0.02 1.3 10.1 0.7 2 23 841 862 840 862 0.96
24 36 6.2e-05 0.0041 18.0 1.0 1 23 868 890 868 890 0.99
25 36 1.6e-05 0.001 19.9 0.7 1 23 946 968 946 968 0.98
26 36 0.061 4.1 8.6 0.3 1 22 974 995 974 997 0.89
27 36 0.014 0.9 10.6 3.9 2 23 1013 1034 1012 1034 0.98
28 36 0.00057 0.038 15.0 2.5 1 23 1040 1062 1040 1062 0.99
29 36 9.7e-07 6.4e-05 23.7 2.0 1 23 1068 1090 1068 1090 0.99
30 36 0.01 0.68 11.0 0.9 1 23 1096 1118 1096 1118 0.95
31 36 0.00022 0.015 16.2 0.9 1 23 1124 1146 1124 1146 0.97
32 36 2.5e-05 0.0017 19.2 0.3 1 23 1152 1174 1152 1174 0.99
33 36 8.2e-05 0.0054 17.6 5.4 1 23 1180 1202 1180 1202 0.97
34 36 9.8e-06 0.00065 20.5 6.0 1 23 1208 1230 1208 1230 0.99
35 36 1e-05 0.00066 20.5 5.0 1 23 1236 1258 1236 1258 0.99
36 36 3.6e-05 0.0024 18.7 2.2 1 22 1264 1285 1264 1285 0.97

Sequence Information

Coding Sequence
ATGAAACAAGAAAATATTGATGACTGTGAAATGCCAGAAAAGGAGGCAGCTTATGTTGAGGAAGATCTTCAGGAACTCGACTTGAAGCACGCAATCGATGTGACTGGAACAACAATCAAAAGTGAACCAGGCACATGGGTGACAGAATATCCCTGCGAAGTGTGTTCCGAAGTGTTCTCGAGTAGCAGTGACTTACAAGAGAATGAATCGGCTCATACAGAAGACCAACGCTATCGGTGCGTAGCTGATGGAAATCTACAAGGGGTCAACTTACAAACAGTTGATCTAACAGGAACAACAATCAAAAGTGAACCAGGATCAGGGGTGACAGTATATCCCGGCGAAGTGTGTTCCGAAGTGTTCTCGAGTTGCATTGACTTACAGGAACATGGAAATAGAGAAAAGAAGCTCTATCAGTGCGTTGACTGCGAGGAAAACTTCTCCTTCCACCCACAGTTATTGGAACATATAAAATTGCAGCATAGCCAAACGAGCGCGAGACCCCATCAGTGCCAACACTGCGAAGAACGTTTCTTCTTTGAAAGTACTTTACTTGTGCACGTAAAAAGGGAGCATACCGGCGATAAGATGAACCAATGTCaaatatgtttcaaatattTATCTTCAAGTACTGCTCTAAAGAATCACGGATTAACACATGTTGGCGAGAAACGTTTTAAGTGCGAAATATGTTCCAAATCGTTAGCATCCAAGTGGACGTGGCAGTTGCATCAAAAAACCCATACAGGTGTCAAGGACTACCAGTGTAGTGCATGCGCCATGACTTTTGCGTACGGTGTCGCCCTCAAAAGACATATGAGACAGCATACCGGAGAGAAACCTTACAAGTGTCAAGTCTGTACGGAGTCGTTTACATACAGTCAATACTTGAAGATACACATGAGAAAGCACACTGGGGAGAAACCATTTGTGTGTCAGGTTTGCTCGGTCAGTTTTGTCCGGAAGGATTTTCTGCAAAAACACCTTAGGGTGCATAGTGGGGAAAAACCTTACCAGTGTAAAATTTGTTCGAAATCTTTCAGTGAGGGCTCGACGTTGTACAAACATGCGGTGATACATTCGGGGGTGAAACCTTATAAATGTGAAATTTGCTCGAAGGCATATGCCCAGCCTAGTTCTTTGCGGTCGCATTCGAGGGTGCATACCGGGgagaagccttacaagtgtcaATTGTGTGAAACCTGTTTCGCCAACCACAGCTCTTTGCGGGTGAAGCAAGAAAACATCGTCAAGTGTGAATTAAATGAAGAAGAAGGGGCATCCTTCACTGGCGGACATCCGGGTGTGGTCAACATACAGACAGTCTATGTTACTGGCGAAAGAAATATAAAGGAGCCTGAACCATGTACTTCCTCTTGGATTACTCAGTATCACTGCGAAGTATGCTCCAAAGTTTTCTCCAGCGTAAAAGACTTACAGGAACATGAAAGTGCCCACATAGAAGAGAAGCGCTACCAGTGCAGTATCTGCCAGGAAAGATTCCCGTTCCAGCGTAACTTACTGGAACATAAAACAATAGACCATGGTCCGAATTACAACGATAGGCCTTTCCCATGCAAACAGTGCACCGAACGTTTTTATTTAGAAAGCACTTTGCACATACACGTAAAAAAGGAGCATGCTGGTTCTAAGATGAACCAATGTGAAGTATGCTTCAAATATTTCTCTTCAAGTGGCGCGTTAAGAAACCACGCTTTGCGACACAAAGGCGAGAAGCCTTTCAAGTGCGGAGTCTGTTCTAAATCATTTACATCGGCGTGGCAGAGGAAGTCCCATGAGAAGGTTCATAGTGGAGAGAAGCCTTACCATTGTGTGGTCTGTTTAAAGTCGTTTGCTACGAGGGAGGACTTTTGCGTGGTTTCCGTCGTTGAGAAGGCATATGCGAAGGCACACAGGCGAGAAGCCTTACCAGTGCCAAGTCTGTGGAAAGCGTTTTGCCAGTCAGAGTTCATTCCAGCTTCATGGGTTAAACAAGAAAACATTGTTGACTGTGAAATACCAGACGAAGAGCCATCTCGCACTGAAGAATATCTACAAGAGTTCAACTTAGCGACTGTCGATACACCTAATGAAAGGATAAAAACAGGTGCTGACTCATGTACGACCAATTGGGTTACAGAATATCACTGTGAAGTGTGTTCCCGCGTTTTTTCAAGCAACATAGACTTACAGGAACATGTAAACACTCATTTAGAAGAAAAACGTTACCAGTGCAGTGTTTGTCAGGAAAGATTCCCATTTCACCGGAACCTACTGGAACACAAGAAGAAAGAACATGTCCACGTTGTGGAGATGTCAGCTCAGTGTATAATATGCCAGAAGGTTGTAAAATCGGAGAAAGCGTTGAAAAAACATGCTGAAACGCATGTAGGGGAGAAGCCTGTCGTGTTTGCTGGCTTGGAAAGGCGCTACGGGTGCGATCAGTGCAGTGAGCGTTTCTTTTTGGAAAGCACATTGCTGGTGCATGTAAAAAGGGAGCATACAGTAGACAAGATCAACCAATGCAAGATATGCTTCAAATACCTGTCTTCAAGCGCCGCATTAAGGAATCATTCCATAAGACATACGGGGGAGAAACCTTACAAGTGTCAAATATGTCCGAAACGTTATGCGTCTAAATGGGGATTACAGTTGCATAAAAAGAAACACGCAGGGGATACGTATTACCAGTGCGCGCAACAAGACGTAATCCTCAAGTCTGAAGTACCAGATGAAGACGATAGACAATTCGATGAGTTCAACTTGGAGACAGTCGATGTAAGGAAGGCAAATGCCATTGGTTCAAGCAGTAGCCGTACTTCGTGGGTAACTCAGTACAATTGTGAAATATGCCCAGAACGTTTCTCAAGCAACAAAGACTTGCGGCAACACGAAAAATCTCATGCCGGAGAAAAACGTTACCAATGCAGTGTTTGCGAAGAACGCTTCCCATTGTTTCGAAATTTACTTGATCATAAGGTGCTAGAGCATACAGAGAAGCCCACTGCTAAAGGAGAGAGGCCTCGCAAGCGACAACAATGTCAGATCTGCTTCAAAACATACGCCTGCAGCCGAAACCTGAGACTTCACCTGCGAACTCACACTGGGGAGAAGCCTTACCAGTGCGATATATGCCAAAGGTTCTTCGCTGCAGAGACTACGTTAAAGCACCATAGAATGACCCACACtggagagaaaccttaccagtgtaaGATCTGCGGAAAATCGTTTGGGCAAACGTACACCTTGCGCTTGCACACCAGAACACACACGGACGAGAGACCTTATGAATGCATCGTCTGCTCCTCTCGTTTTCGCGACAAGAGCGTATTACGAACACATTTAAGGTCACACACGGGGGAGAAACCATACAAGTGTAAGATATGTTCGAAAGCATTTAGGGAAACCGGAGCGTTACATCGGCATGAAATTGTTCACACTAAGGAGAAACCTTTCCAGTGTGATGTCTGTTCCAGATCGTACACGCGGCTTGGTGCGTTGCAGATACACGGCAGAACGCATACTGGGGAGAAACCTTATGAATGTTCTACGTGTTCGAAGAGATTTTCGTATAAGCATGGCCTACGGAAGCACATGATGTTTCATACGGGAGAGAAGCCTTACCAATGTGAATTTTGTACAAAATGCTTCTCGGCTTCGAGTAATTTGCGGAAACATAAGAGAACGCATACAGGAGAGAAGCCTTATGAGTGTAATATGTGTTCGAAGAGTTTTAGTCAGCTGCATTCACTAAAAAGTCATAAGAGGACCCACACGGGGGAGAAACCTTTTCAGTGTCCGATGTGTTCAAAGTGTTTCACCAGTGGCAGTTCCCTGAGGTCTCATTTGAAAACGCCCCCGTAA
Protein Sequence
MKQENIDDCEMPEKEAAYVEEDLQELDLKHAIDVTGTTIKSEPGTWVTEYPCEVCSEVFSSSSDLQENESAHTEDQRYRCVADGNLQGVNLQTVDLTGTTIKSEPGSGVTVYPGEVCSEVFSSCIDLQEHGNREKKLYQCVDCEENFSFHPQLLEHIKLQHSQTSARPHQCQHCEERFFFESTLLVHVKREHTGDKMNQCQICFKYLSSSTALKNHGLTHVGEKRFKCEICSKSLASKWTWQLHQKTHTGVKDYQCSACAMTFAYGVALKRHMRQHTGEKPYKCQVCTESFTYSQYLKIHMRKHTGEKPFVCQVCSVSFVRKDFLQKHLRVHSGEKPYQCKICSKSFSEGSTLYKHAVIHSGVKPYKCEICSKAYAQPSSLRSHSRVHTGEKPYKCQLCETCFANHSSLRVKQENIVKCELNEEEGASFTGGHPGVVNIQTVYVTGERNIKEPEPCTSSWITQYHCEVCSKVFSSVKDLQEHESAHIEEKRYQCSICQERFPFQRNLLEHKTIDHGPNYNDRPFPCKQCTERFYLESTLHIHVKKEHAGSKMNQCEVCFKYFSSSGALRNHALRHKGEKPFKCGVCSKSFTSAWQRKSHEKVHSGEKPYHCVVCLKSFATREDFCVVSVVEKAYAKAHRREALPVPSLWKAFCQSEFIPASWVKQENIVDCEIPDEEPSRTEEYLQEFNLATVDTPNERIKTGADSCTTNWVTEYHCEVCSRVFSSNIDLQEHVNTHLEEKRYQCSVCQERFPFHRNLLEHKKKEHVHVVEMSAQCIICQKVVKSEKALKKHAETHVGEKPVVFAGLERRYGCDQCSERFFLESTLLVHVKREHTVDKINQCKICFKYLSSSAALRNHSIRHTGEKPYKCQICPKRYASKWGLQLHKKKHAGDTYYQCAQQDVILKSEVPDEDDRQFDEFNLETVDVRKANAIGSSSSRTSWVTQYNCEICPERFSSNKDLRQHEKSHAGEKRYQCSVCEERFPLFRNLLDHKVLEHTEKPTAKGERPRKRQQCQICFKTYACSRNLRLHLRTHTGEKPYQCDICQRFFAAETTLKHHRMTHTGEKPYQCKICGKSFGQTYTLRLHTRTHTDERPYECIVCSSRFRDKSVLRTHLRSHTGEKPYKCKICSKAFRETGALHRHEIVHTKEKPFQCDVCSRSYTRLGALQIHGRTHTGEKPYECSTCSKRFSYKHGLRKHMMFHTGEKPYQCEFCTKCFSASSNLRKHKRTHTGEKPYECNMCSKSFSQLHSLKSHKRTHTGEKPFQCPMCSKCFTSGSSLRSHLKTPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-