Basic Information

Insect: Psococerastis gibbosa
Gene Symbol: -
Assembly: GCA_963971405.1
Location: OZ020491.1:32354241-32378360[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00013 0.0086 17.0 3.6 1 23 70 92 70 92 0.98

2 27 8e-05 0.0053 17.6 2.4 1 23 98 120 98 120 0.96

3 27 3.7e-06 0.00025 21.8 2.5 1 23 126 148 126 148 0.97

4 27 9.6e-07 6.4e-05 23.7 3.0 1 23 154 176 154 176 0.99

5 27 2.7e-05 0.0018 19.1 2.8 1 23 182 204 182 204 0.96

6 27 1e-05 0.00068 20.4 1.9 1 23 210 232 210 232 0.99

7 27 0.00026 0.017 16.0 0.3 1 23 238 260 238 260 0.98

8 27 5.9e-06 0.00039 21.2 1.5 1 23 266 289 266 289 0.97

9 27 0.0002 0.013 16.4 0.9 1 23 295 317 295 317 0.97

10 27 0.00044 0.029 15.3 3.6 2 21 323 342 323 344 0.95

11 27 0.0033 0.22 12.5 0.1 1 16 350 365 350 367 0.92

12 27 0.00035 0.023 15.6 0.4 1 23 658 680 658 680 0.98

13 27 1.5e-06 9.9e-05 23.1 1.0 1 23 686 708 686 708 0.96

14 27 0.0049 0.33 12.0 0.1 1 23 714 736 714 736 0.88

15 27 9.5e-06 0.00063 20.5 0.8 1 23 742 764 742 764 0.97

16 27 0.002 0.13 13.2 0.4 1 23 770 792 770 792 0.97

17 27 3.9e-07 2.6e-05 24.9 0.3 1 23 798 820 798 820 0.98

18 27 7.2e-06 0.00048 20.9 1.7 1 23 826 849 826 849 0.97

19 27 0.061 4.1 8.6 0.5 4 23 962 981 962 981 0.95

20 27 1.3e-05 0.00085 20.1 0.7 1 23 984 1006 984 1006 0.98

21 27 5.2e-07 3.5e-05 24.5 1.0 1 23 1012 1034 1012 1034 0.98

22 27 0.012 0.76 10.8 0.3 3 23 1042 1062 1041 1062 0.99

23 27 3.5e-06 0.00023 21.9 1.2 1 23 1068 1090 1068 1090 0.98

24 27 2.4e-06 0.00016 22.4 1.3 1 23 1096 1118 1096 1118 0.98

25 27 0.002 0.14 13.2 0.7 1 23 1124 1146 1124 1146 0.98

26 27 1.8e-06 0.00012 22.8 1.6 1 23 1152 1174 1152 1174 0.98

27 27 8.5e-05 0.0056 17.5 2.7 1 23 1180 1202 1180 1202 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00013	0.0086	17.0	3.6	1	23	70	92	70	92	0.98
2	27	8e-05	0.0053	17.6	2.4	1	23	98	120	98	120	0.96
3	27	3.7e-06	0.00025	21.8	2.5	1	23	126	148	126	148	0.97
4	27	9.6e-07	6.4e-05	23.7	3.0	1	23	154	176	154	176	0.99
5	27	2.7e-05	0.0018	19.1	2.8	1	23	182	204	182	204	0.96
6	27	1e-05	0.00068	20.4	1.9	1	23	210	232	210	232	0.99
7	27	0.00026	0.017	16.0	0.3	1	23	238	260	238	260	0.98
8	27	5.9e-06	0.00039	21.2	1.5	1	23	266	289	266	289	0.97
9	27	0.0002	0.013	16.4	0.9	1	23	295	317	295	317	0.97
10	27	0.00044	0.029	15.3	3.6	2	21	323	342	323	344	0.95
11	27	0.0033	0.22	12.5	0.1	1	16	350	365	350	367	0.92
12	27	0.00035	0.023	15.6	0.4	1	23	658	680	658	680	0.98
13	27	1.5e-06	9.9e-05	23.1	1.0	1	23	686	708	686	708	0.96
14	27	0.0049	0.33	12.0	0.1	1	23	714	736	714	736	0.88
15	27	9.5e-06	0.00063	20.5	0.8	1	23	742	764	742	764	0.97
16	27	0.002	0.13	13.2	0.4	1	23	770	792	770	792	0.97
17	27	3.9e-07	2.6e-05	24.9	0.3	1	23	798	820	798	820	0.98
18	27	7.2e-06	0.00048	20.9	1.7	1	23	826	849	826	849	0.97
19	27	0.061	4.1	8.6	0.5	4	23	962	981	962	981	0.95
20	27	1.3e-05	0.00085	20.1	0.7	1	23	984	1006	984	1006	0.98
21	27	5.2e-07	3.5e-05	24.5	1.0	1	23	1012	1034	1012	1034	0.98
22	27	0.012	0.76	10.8	0.3	3	23	1042	1062	1041	1062	0.99
23	27	3.5e-06	0.00023	21.9	1.2	1	23	1068	1090	1068	1090	0.98
24	27	2.4e-06	0.00016	22.4	1.3	1	23	1096	1118	1096	1118	0.98
25	27	0.002	0.14	13.2	0.7	1	23	1124	1146	1124	1146	0.98
26	27	1.8e-06	0.00012	22.8	1.6	1	23	1152	1174	1152	1174	0.98
27	27	8.5e-05	0.0056	17.5	2.7	1	23	1180	1202	1180	1202	0.98

Sequence Information

Coding Sequence: ATGTGGTACCTACTCTCAGGAGCAGTCATTCCGGGCCCAAGCGTGGATGCTGATTATGATTTTGAACCTAACGGAAACACTGAAGAGCCATTTAACGATGCCATAGTGTCTGTTCAGgtgaaaaaggaggacatctATGATGCTGAAGAAGTGCTGGCAACGTTGGCTGCTACACCTAACTCTGACGGATGCGGACACCGGCCACCCTACTACTGTGAAATATGCCGCAAATCATTCGCAACTATGCAGAGTCTACAGCATCACAACCGAACTCACACCGGGGAAAAACCTTACCTGTGCCAACACTGCGATAAACGCTTCATACAGGTCAGCGGGCTACAGTATCATTTAAAAACGCATAGTGGGGAAAGACCCCATAGTTGTACAATATGTGGAAAAACTTTTATCGGCAAAGGTCACCTGAATAGACATGTCAAAATACATACCGGGCAGAAACCCTATAAGTGCCAAATCTGCGGTAAAAGTTTCAAACAGTTCAGCGGGCTGCAGTATCATAGGAAGACACATATCGCTGAAAGGCCTCATTGTTGTGTAACATGCGGGAAGGCATTTAGCAGTTCTGGGCAGTTGAATATCCATGAAAGAACTCATAGTGAGGTGAAGCCATATCAGTGCCAAAGCTGTGATAAAAGTTTCAGACAGAGAGACGGTCTGCAGTATCATCTGACGACTCATTCCGGAAAAAAACCGTTTAGTTGTGCGGTCTGTGGTAAAATATTCGCGACTAAACAGAAGGTTCAACTACACGGCAGAACACATACGACTGAGAGACCGTTTGAATGTAAACAATGTGATAAAAGTTTCAAACAAAGAGACGGTCTCAAATATCATGTAATGAAAATACATACGGGGGAACGGCCTCATAGTTGTGAAACATGTGGTAAGACATTCATACTACTAGTTCAGCTGCAAGAACATGTAAGGAATCATACAGGAGAGAAACCCCAGTGTTTGGTTTGTGGGAAAGGTTTCTCCCGTAAGTGGCACTTGACCGAGCATTTGAGATGTCATACCGGGGAAATGCCATTCGCGTGTAATACATGCGGGAAAGTGTTCGCGCGTAAAGATGCGTTGTTGGAGAGTAACATGTACAACGCGCAGTGCTTTACACCGCCGAAAGCGAACCAACCCCCCTCTACAGGGGTCAGCGACGTCATGTTGTGCGGTGGCGGTTACTACATGCACGAGCTGGAGTCGGAGCTCCAGATCGGCGATAATAACTTGGCCTATCCGGCTGAGCCGGAGCCGCCCAGCGCGACATTCTTCGATCAGGGCTTCGATGCGTGGCCTGGCCCCGCCCCCATGGGGTTCCAGCCGCCCGGGACTGCTCCGTACTTCGCCGGCGACGTCCAGCCCTGTTATGCACCGTCCCACTACTCGCAGGAGCTAATGTACCCAATAGGCGAACCGCAGACCGGTCAAGATGTGCGACCTCAAGCGTCTGCTGTGCCGAATAATGCTCCGCCTATTCCAAATCTGCTGCCCACCGCGGATAGTTGGAATATGGGATATTCACACCCGcagcagctcagccctagcggTTACAACGCACAATACTCGTGCAACGAGCAATACAACGAGGACAGCGCCGCGCTGGCCGCAACCCTAGCGCCTCAACCAATGCCCCAGCCGCCATTGGAGACGCTTCAGTTGGCGAACGACCCACCTCCAGGACAGGACTGGTCGGCGTCTACCGACCTGTTTACTGACCTCGAGGATTTATCGGCGTTTACGAGCCTCGAAGACTGGACGACTCCAGTGACTCCCGACACCAGTAAGGACCTAAGTCATGGAATAACTTGTGCAGGTGAGATTCTTCATCAGAGTACAACATGTATGAGTTTTAATTGCGAAGGACACCCGAGGGAGATGCTTCATCAGTGGGCAACCTGTGGTGAGAGCTTAATTGATAGAGGCAATCAGCCAAAACCTGCTAGTATTCACAAGCCTCATCAGTGCACGACATGTGGCAAGAGTTTCGTCTGGAAAGGGGCTTTGTCAGAACATATTCAAATTCACACGGGAGAGAGGCATTATCTGTGCACGACCTGTGGTAAGAGTTTCGCTCAGAAACGGGATTTGTCAAAACATATTAAAATTCACACAGCAGAGAGAAATTTTCAATGCACGATCTGTGGTAAGAGTTTCGTTTGGAAATGGATCTTGTTAGATCATATTAAAATTCACACGGGAGAGAGAAATCATCAATGTATGGCCTGTGGCAAGAGTTTCGTTCGGAAAGGGAACTTGTCAGAACATATTAAAATTCACACAGGAGAGAAACATCATCAGTGTACTACCTGTGGGAAAAGTTTTGCTTGGAAAGGGGTCTTGTTAGATCATATTAAAATTCACACTGGAGAGAAAAATTATCCGTGTACGACCTGTGGTAAGAGATTCGCTCGGAAAGGGAACTTGTCAGAACATATTAAAGTTCACATGGGAATGAGAAATTATCAGTGTACGACCTGTGGTAAAAACTTCGTTCGGAAAAGGAACTTGTCAGAACATGTTAAAAATTCGCACGGGCAGCAGCTCAACCTTAACGGTTACAATGCACAATGTAACACCGGCAGCGCCACCCAGCCCACTGCCCTCACGCAGCCGCCATTGGAGACGTTTCAGTTTACAAACGACCAGCCGTCAGGACAGGACTGGTCGGCGTTTCCCGACCTCGAGGACGGGTTGGCGCTTGCCGACTTCGAGGACTGGTCGGCGTTTCCTGACCTCGAGGACGGGTTGGCGTTTGCCGACCTCGAGAACTGGTCGGCATATACCGACTTCGAGGACTGGACGACTCCTGTGAATACGATGGCGGCTCCCGACACGAATCATGAAATAACTTCTACGGTTGAGGGGCCTCATCAGTGTGGTGAGAGTTTCACTGATAAAGGAGATCAGTCAGAACATTTTAGAATTCACAAGCCTCATCAGTGCGAGACATGTGGCAATAGTTTCGCTAGAAAAGGGGCTTTGTCAAAACATATTCAAATTCACACGGGAGAGAAACATTATCAGTGTACGACCTGCGGTAAGAGTTTCGTTAGGAAAAATAACTTGTCAGAGCATGTTAAAATTCACAAGGGTGAAAGACATCACGGGTGTACGACGTGCAATAAGAGTTTCGTTTGGAAAAGGGCCTTGTTGGATCATATTAAAATTCACACGGGAGAGAGTAATCATCAGTGTAAGGCGTGTGGTAAGAGGTTCGTTCGGAAAGGGAACTTGGCGGAACATATTAAAAGTCACACGGGAAAGAGAAATTATCAGTGTACAACCTGTGGTAAGAATTTCATTCGCAAAAGGAACTTGTCAGAACATGTTAAAATTCACACGGGTGAGAAACATTATAGGTGTATGACATGTGGTATGAGTTTCATTTGGAAAGGGACCTTGTTAAATCATATGAGATTTCACACGAGAGAGAAAAATTATCAGTGTACGACCTGTGGTAAGAGTTTCGTTGAGAAACGGAATTTGTCAAATCATATTAAACAGCACACGGGTGAGAAGCATCATCAGTGTACGACCTGTTATAAGAGATTCGTTCGGAAAGGGAGCTTGTTAGATCATATTAAAATTCACACGGGAGAGAAAAATCATCAGTGTATGGTCTGTGCTATTCTTGCGCTGAGTAGCAACCGTGCCACCGATTGTGATAAAAACAATAAACTGCCGCACGCTGCAGTCGAATTTTCTATAGGGTGGAGCTATGTCAGCTTACAGTGGATTCCCAGCCATAAAGGAGTCAACGGCAACGAGAAAGTGGACGAGCTGGCCAAACTTGCAACTATATTGGAGCAATCGGCCAGTGCGCACTGTCGTGCACCAAGGAAAAAACCCACTATAGACAGAGCTGTAAGAGCATAG
Protein Sequence: MWYLLSGAVIPGPSVDADYDFEPNGNTEEPFNDAIVSVQVKKEDIYDAEEVLATLAATPNSDGCGHRPPYYCEICRKSFATMQSLQHHNRTHTGEKPYLCQHCDKRFIQVSGLQYHLKTHSGERPHSCTICGKTFIGKGHLNRHVKIHTGQKPYKCQICGKSFKQFSGLQYHRKTHIAERPHCCVTCGKAFSSSGQLNIHERTHSEVKPYQCQSCDKSFRQRDGLQYHLTTHSGKKPFSCAVCGKIFATKQKVQLHGRTHTTERPFECKQCDKSFKQRDGLKYHVMKIHTGERPHSCETCGKTFILLVQLQEHVRNHTGEKPQCLVCGKGFSRKWHLTEHLRCHTGEMPFACNTCGKVFARKDALLESNMYNAQCFTPPKANQPPSTGVSDVMLCGGGYYMHELESELQIGDNNLAYPAEPEPPSATFFDQGFDAWPGPAPMGFQPPGTAPYFAGDVQPCYAPSHYSQELMYPIGEPQTGQDVRPQASAVPNNAPPIPNLLPTADSWNMGYSHPQQLSPSGYNAQYSCNEQYNEDSAALAATLAPQPMPQPPLETLQLANDPPPGQDWSASTDLFTDLEDLSAFTSLEDWTTPVTPDTSKDLSHGITCAGEILHQSTTCMSFNCEGHPREMLHQWATCGESLIDRGNQPKPASIHKPHQCTTCGKSFVWKGALSEHIQIHTGERHYLCTTCGKSFAQKRDLSKHIKIHTAERNFQCTICGKSFVWKWILLDHIKIHTGERNHQCMACGKSFVRKGNLSEHIKIHTGEKHHQCTTCGKSFAWKGVLLDHIKIHTGEKNYPCTTCGKRFARKGNLSEHIKVHMGMRNYQCTTCGKNFVRKRNLSEHVKNSHGQQLNLNGYNAQCNTGSATQPTALTQPPLETFQFTNDQPSGQDWSAFPDLEDGLALADFEDWSAFPDLEDGLAFADLENWSAYTDFEDWTTPVNTMAAPDTNHEITSTVEGPHQCGESFTDKGDQSEHFRIHKPHQCETCGNSFARKGALSKHIQIHTGEKHYQCTTCGKSFVRKNNLSEHVKIHKGERHHGCTTCNKSFVWKRALLDHIKIHTGESNHQCKACGKRFVRKGNLAEHIKSHTGKRNYQCTTCGKNFIRKRNLSEHVKIHTGEKHYRCMTCGMSFIWKGTLLNHMRFHTREKNYQCTTCGKSFVEKRNLSNHIKQHTGEKHHQCTTCYKRFVRKGSLLDHIKIHTGEKNHQCMVCAILALSSNRATDCDKNNKLPHAAVEFSIGWSYVSLQWIPSHKGVNGNEKVDELAKLATILEQSASAHCRAPRKKPTIDRAVRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -