Basic Information

Gene Symbol
rcor2
Assembly
GCA_963971405.1
Location
OZ020489.1:27336523-27352204[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-08 4.3e-05 24.0 0.0 3 46 127 170 125 170 0.96
2 2 4.7e-10 7e-07 29.7 0.0 3 45 357 399 356 400 0.95

Sequence Information

Coding Sequence
ATGGTATTGtcagaaaaaaatacaaattctaTGCGAAATGGCCAGCGATCTCGTGGTCCGAGCCCCAACAGCAACGGCGGGGGTAGTCCTGAACCTGACGAAGAGAGGGAAAAGATACGCGTTGGCCGTGACTATCAGGCTGTATGTCCTGATCTGATTCTTCCAGTGGCAAAAGTTGACAAAGAAATGAGTGACAGGGCTTTACTAGTTTGGTCACCATCATCCAGCATTTCAGATCAGCAATTGGACGAATATATACAAATCGCCAAAGAGCAATATGGCTACAATGGTGAGCAGGCGCTTGGAATGCTGTTTTGGCATAAACACGACTTACAAAAGGCTGTTTTAGACTTAGCAAATTTCACCCCATTCCCCGACGAGTGGACTGCCGAAGACAAGGTTCTTTTTGAACAAGCTTTCACGTTTCATGGGAAGACCTTTCACCGTATTAGACAAATGTTGCCAGACAAGACAATGGGTACCCtagtaaaatattattactcttgGAAGAAGACAAGAACTCGGACATCATTGATGGACCGGCAGGCGCGGAAAGGAAATGTGAAAGAAGAGGCTAGTGAGCAGGGCAGTGAGCAAGGCTCCATTTCAGAATCCGAGACTGAAGAACCCAAAGTGAAAGAAAACGGCGATACAAAGGAGGTTGTTGAGGTAAAAGAGGGTCGATGCCACTGCCACAACTGTGGCATCCCCTGCACCTTAACTAAGTCGACTCCAAAGGGTATTCTCTGTAACACTTGCTTTTTGCACTGGAGAATGGAAGGCCACATGCGACCGACAATAGGGCCAATGCGGGGGCGGGACAGACATAGTTATAACTGGCTTAAAATGAATTGGCGCCCACCTCGGGGCATGCACATTAACCACGAAGACCTCGTGTCTCTCTCCTCCGAGACCGCCTCAACTCTCTTCGTCTCACTTGACCGTGATATCGCTTCTCTCAAGCGTCAGGTACAAAATAATAAGCAATCAATTAGCAGTATAAAGAAGAAAAGTGGGGAAAGTGTTGAAGAAATCCGGCCAGAAGAGCCAGCTGGCAAGGCTAACGCACGTTGGACTTCCGAGGAGGTTTCCTTGGCTGTGCAAGGTGTTCGTAAGTATGGGAAAAATTGTAAAGCCATTGCCGATACGGTCGGGACAAAGACAGAAGCACATATTCGTAGTTTTTTTGGAACGCATCGCAAAAGATGTAACTTGGATAATGTATTGAAGGAATATGAGACAGAAAATGGGGCGGACGAGGGTAAAAAAGACGCCAAAATAATGAAGATTGAAGTAGACAGTGACGTAACCAGCGATCAACCAGTTGCAGTTGCAGCCGCCGTAACGAATCCTCCCCAAAAGTGA
Protein Sequence
MVLSEKNTNSMRNGQRSRGPSPNSNGGGSPEPDEEREKIRVGRDYQAVCPDLILPVAKVDKEMSDRALLVWSPSSSISDQQLDEYIQIAKEQYGYNGEQALGMLFWHKHDLQKAVLDLANFTPFPDEWTAEDKVLFEQAFTFHGKTFHRIRQMLPDKTMGTLVKYYYSWKKTRTRTSLMDRQARKGNVKEEASEQGSEQGSISESETEEPKVKENGDTKEVVEVKEGRCHCHNCGIPCTLTKSTPKGILCNTCFLHWRMEGHMRPTIGPMRGRDRHSYNWLKMNWRPPRGMHINHEDLVSLSSETASTLFVSLDRDIASLKRQVQNNKQSISSIKKKSGESVEEIRPEEPAGKANARWTSEEVSLAVQGVRKYGKNCKAIADTVGTKTEAHIRSFFGTHRKRCNLDNVLKEYETENGADEGKKDAKIMKIEVDSDVTSDQPVAVAAAVTNPPQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-